RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ST20Q9HBF5 79 aa10.86□□□□□ -0.67
VRK3-207ENST00000594092 NACAE9PAV3 2078 aa10.86□□□□□ -0.67
VRK3-207ENST00000594092 RHODO00212 210 aa10.86□□□□□ -0.67
VRK3-207ENST00000594092 BTF3P20290 206 aaKnown RBP10.86□□□□□ -0.67
VRK3-207ENST00000594092 A0A096LNJ9 63 aa10.85□□□□□ -0.67
VRK3-207ENST00000594092 IGHV3-73A0A0B4J1V6 119 aa10.85□□□□□ -0.67
VRK3-207ENST00000594092 H7C1H1 209 aa10.85□□□□□ -0.67
VRK3-207ENST00000594092 M0QY20 66 aa10.85□□□□□ -0.67
VRK3-207ENST00000594092 LAGE3Q14657 143 aa10.85□□□□□ -0.67
VRK3-207ENST00000594092 KRTAP21-3Q3LHN1 58 aa10.85□□□□□ -0.67
VRK3-207ENST00000594092 K7EIL1 84 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 TMEM70Q9BUB7 260 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 DNHD1Q96M86 4753 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 IGHV4-28A0A0C4DH34 117 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 TRBV6-5A0A0K0K1A5 114 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 GAGE12BA1L429 117 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 K7EMI3 77 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 TCAPO15273 167 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 GAGE7O76087 117 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 GAGE12FP0CL80 117 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 GAGE12GP0CL81 117 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 GAGE12IP0CL82 117 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 MIFP14174 115 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 FCER1GP30273 86 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 RPL32P62910 135 aaKnown RBP10.84□□□□□ -0.67
VRK3-207ENST00000594092 Q8NAQ8 132 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 OR4C5Q8NGB2 326 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 MAP1LC3CQ9BXW4 147 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 EDA2RQ9HAV5 297 aa10.84□□□□□ -0.67
VRK3-207ENST00000594092 TRAV4A0A0B4J268 109 aa10.83□□□□□ -0.68
VRK3-207ENST00000594092 ZFP2Q6ZN57 461 aa10.83□□□□□ -0.68
VRK3-207ENST00000594092 LINC00173Q6ZV60 143 aa10.83□□□□□ -0.68
VRK3-207ENST00000594092 TP53TG1Q9Y2A0 90 aa10.83□□□□□ -0.68
VRK3-207ENST00000594092 ORMDL2Q53FV1 153 aa10.82□□□□□ -0.68
VRK3-207ENST00000594092 Q6ZSN1 163 aa10.82□□□□□ -0.68
VRK3-207ENST00000594092 ZNF479Q96JC4 524 aa10.82□□□□□ -0.68
VRK3-207ENST00000594092 RETNQ9HD89 108 aa10.82□□□□□ -0.68
VRK3-207ENST00000594092 TRGV2A0A075B6R0 118 aa10.81□□□□□ -0.68
VRK3-207ENST00000594092 VCYO14598 125 aa10.81□□□□□ -0.68
VRK3-207ENST00000594092 DEFB4AO15263 64 aa10.81□□□□□ -0.68
VRK3-207ENST00000594092 LINC00612Q8N6U2 182 aa10.81□□□□□ -0.68
VRK3-207ENST00000594092 Q8N976 141 aa10.81□□□□□ -0.68
VRK3-207ENST00000594092 SDHAF1A6NFY7 115 aa10.81□□□□□ -0.68
VRK3-207ENST00000594092 SYS1-DBNDD2H3BUS1 97 aa10.81□□□□□ -0.68
VRK3-207ENST00000594092 IGHV3-53P01767 116 aa10.81□□□□□ -0.68
VRK3-207ENST00000594092 POLR2KP53803 58 aaKnown RBP10.81□□□□□ -0.68
VRK3-207ENST00000594092 NUDT3O95989 172 aa10.8□□□□□ -0.68
VRK3-207ENST00000594092 FAM222AQ5U5X8 452 aa10.8□□□□□ -0.68
VRK3-207ENST00000594092 KIR2DL4Q99706 377 aa10.8□□□□□ -0.68
VRK3-207ENST00000594092 C20orf202A1L168 122 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 LYRM9A8MSI8 78 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 DEFB130BP0DP73 79 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 DEFB130AP0DP74 79 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 PET117Q6UWS5 81 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 TEX43Q6ZNM6 134 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 TRBV27A0A0K0K1C4 114 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 P0DMU3 169 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 FAM231AP0DMU4 169 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 FAM231CP0DMU5 169 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 SBSPONQ8IVN8 264 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 IFI27L1Q96BM0 104 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 DKK2Q9UBU2 259 aa10.79□□□□□ -0.68
VRK3-207ENST00000594092 DEFB121Q5J5C9 76 aa10.78□□□□□ -0.68
VRK3-207ENST00000594092 C18orf15Q96N68 181 aa10.78□□□□□ -0.68
VRK3-207ENST00000594092 H0Y8G0 127 aa10.77□□□□□ -0.68
VRK3-207ENST00000594092 G0S2P27469 103 aa10.77□□□□□ -0.68
VRK3-207ENST00000594092 Q9UF83 564 aa10.77□□□□□ -0.68
VRK3-207ENST00000594092 TNFRSF18Q9Y5U5 241 aa10.77□□□□□ -0.68
VRK3-207ENST00000594092 CIDEAO60543 219 aa10.77□□□□□ -0.69
VRK3-207ENST00000594092 SPATA12Q7Z6I5 190 aa10.77□□□□□ -0.69
VRK3-207ENST00000594092 CELA1Q9UNI1 258 aa10.77□□□□□ -0.69
VRK3-207ENST00000594092 I3L3M4 83 aa10.76□□□□□ -0.69
VRK3-207ENST00000594092 ATP5LO75964 103 aa10.76□□□□□ -0.69
VRK3-207ENST00000594092 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
VRK3-207ENST00000594092 NEXN-AS1Q8NBZ9 246 aa10.75□□□□□ -0.69
VRK3-207ENST00000594092 TOMM6Q96B49 74 aa10.75□□□□□ -0.69
VRK3-207ENST00000594092 VAMP8Q9BV40 100 aa10.75□□□□□ -0.69
VRK3-207ENST00000594092 LINC00587B1AMM8 73 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 FHL2Q14192 279 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 SLC25A29Q8N8R3 303 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 TRGV4A0A0C4DH28 118 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 LINC01549A6NIU2 74 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 K7EQD1 137 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 SPART-AS1P0CW21 52 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 RHOHQ15669 191 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 LINC01545Q5VT33 79 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 C2orf66Q6UXQ4 117 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 ZNF664Q8N3J9 261 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 TM2D3Q9BRN9 247 aa10.74□□□□□ -0.69
VRK3-207ENST00000594092 TSTD3H0UI37 97 aa10.73□□□□□ -0.69
VRK3-207ENST00000594092 DAD1P61803 113 aa10.73□□□□□ -0.69
VRK3-207ENST00000594092 PKIAP61925 76 aa10.73□□□□□ -0.69
VRK3-207ENST00000594092 ATOH7Q8N100 152 aa10.73□□□□□ -0.69
VRK3-207ENST00000594092 SPATA25Q9BR10 227 aa10.73□□□□□ -0.69
VRK3-207ENST00000594092 CYSLTR1Q9Y271 337 aa10.73□□□□□ -0.69
VRK3-207ENST00000594092 TENM3Q9P273 2699 aa10.73□□□□□ -0.69
VRK3-207ENST00000594092 TRBV10-1A0A0K0K1A3 114 aa10.72□□□□□ -0.69
VRK3-207ENST00000594092 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms