RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 C1orf158Q8N1D5 194 aa9.61□□□□□ -0.87
VRK3-205ENST00000593919 LINC01587Q99440 93 aa9.61□□□□□ -0.87
VRK3-205ENST00000593919 DPH3P1Q9H4G8 78 aa9.61□□□□□ -0.87
VRK3-205ENST00000593919 MGAM2Q2M2H8 2515 aa9.61□□□□□ -0.87
VRK3-205ENST00000593919 MORN3Q6PF18 240 aaPredicted RBP9.61□□□□□ -0.87
VRK3-205ENST00000593919 SLC25A34Q6PIV7 304 aa9.61□□□□□ -0.87
VRK3-205ENST00000593919 TRGV11A0A075B6L2 103 aa9.6□□□□□ -0.87
VRK3-205ENST00000593919 IGHV3OR16-12A0A075B7B8 117 aa9.6□□□□□ -0.87
VRK3-205ENST00000593919 CIDEAO60543 219 aa9.6□□□□□ -0.87
VRK3-205ENST00000593919 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
VRK3-205ENST00000593919 COL5A1-AS1Q5SY13 56 aa9.6□□□□□ -0.87
VRK3-205ENST00000593919 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
VRK3-205ENST00000593919 ZNF561-AS1K7EIQ3 104 aa9.59□□□□□ -0.87
VRK3-205ENST00000593919 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
VRK3-205ENST00000593919 STPG4Q8N801 248 aa9.59□□□□□ -0.87
VRK3-205ENST00000593919 AP1S3Q96PC3 154 aa9.59□□□□□ -0.87
VRK3-205ENST00000593919 C1QTNF4Q9BXJ3 329 aa9.59□□□□□ -0.87
VRK3-205ENST00000593919 TCTAP57738 103 aa9.59□□□□□ -0.87
VRK3-205ENST00000593919 LAGE3Q14657 143 aa9.59□□□□□ -0.87
VRK3-205ENST00000593919 CSNK1G2-AS1Q8NCQ2 148 aa9.59□□□□□ -0.87
VRK3-205ENST00000593919 RPL39LQ96EH5 51 aaKnown RBP9.59□□□□□ -0.87
VRK3-205ENST00000593919 LINC00467Q9BRT7 94 aa9.59□□□□□ -0.87
VRK3-205ENST00000593919 G3V4G9 280 aa9.58□□□□□ -0.88
VRK3-205ENST00000593919 RASL10AQ92737 203 aa9.58□□□□□ -0.88
VRK3-205ENST00000593919 CSTL1Q9H114 145 aa9.58□□□□□ -0.88
VRK3-205ENST00000593919 DKK2Q9UBU2 259 aa9.58□□□□□ -0.88
VRK3-205ENST00000593919 NXPH4O95158 308 aa9.57□□□□□ -0.88
VRK3-205ENST00000593919 SMIM2Q9BVW6 85 aa9.57□□□□□ -0.88
VRK3-205ENST00000593919 PRSS1P07477 247 aa9.57□□□□□ -0.88
VRK3-205ENST00000593919 SMIM17P0DL12 118 aa9.57□□□□□ -0.88
VRK3-205ENST00000593919 RBX1P62877 108 aa9.57□□□□□ -0.88
VRK3-205ENST00000593919 JPT2Q9H910 190 aa9.57□□□□□ -0.88
VRK3-205ENST00000593919 NACAE9PAV3 2078 aa9.56□□□□□ -0.88
VRK3-205ENST00000593919 COX8AP10176 69 aa9.56□□□□□ -0.88
VRK3-205ENST00000593919 AZU1P20160 251 aa9.56□□□□□ -0.88
VRK3-205ENST00000593919 SUMO2P61956 95 aaKnown RBP9.56□□□□□ -0.88
VRK3-205ENST00000593919 C11orf72Q8NBR9 251 aa9.56□□□□□ -0.88
VRK3-205ENST00000593919 NUDT3O95989 172 aa9.55□□□□□ -0.88
VRK3-205ENST00000593919 IGHV4-30-4P0DP06 118 aa9.55□□□□□ -0.88
VRK3-205ENST00000593919 ZNF415Q09FC8 603 aa9.55□□□□□ -0.88
VRK3-205ENST00000593919 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
VRK3-205ENST00000593919 SAMD5Q5TGI4 173 aa9.55□□□□□ -0.88
VRK3-205ENST00000593919 A0A087WWL8 130 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 COTL1Q14019 142 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 C20orf78Q9BR46 151 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 CCL25O15444 150 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 ATP5LO75964 103 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 ZNF876PQ49A33 203 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 SYT8Q8NBV8 401 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 KIR2DL5BQ8NHK3 375 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 TMEM263Q8WUH6 116 aaKnown RBP9.54□□□□□ -0.88
VRK3-205ENST00000593919 KIF25-AS1Q9Y6Z4 181 aa9.54□□□□□ -0.88
VRK3-205ENST00000593919 APOC4P55056 127 aa9.53□□□□□ -0.88
VRK3-205ENST00000593919 LINC00315P59091 139 aa9.53□□□□□ -0.88
VRK3-205ENST00000593919 ORAOV1Q8WV07 137 aa9.53□□□□□ -0.88
VRK3-205ENST00000593919 M0R2P5 195 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 ORMDL2Q53FV1 153 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 NEGR1Q7Z3B1 354 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 F5H697 171 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 IGKCP01834 107 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 FGF6P10767 208 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 NMUP48645 174 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 FAM74A4Q5TZK3 123 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 POM121L12Q8N7R1 296 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 IL17DQ8TAD2 202 aa9.52□□□□□ -0.89
VRK3-205ENST00000593919 PPP1R17O96001 155 aa9.51□□□□□ -0.89
VRK3-205ENST00000593919 GHRHP01286 108 aa9.51□□□□□ -0.89
VRK3-205ENST00000593919 RRN3P1Q2M238 152 aa9.51□□□□□ -0.89
VRK3-205ENST00000593919 DEFB135Q30KP9 77 aa9.51□□□□□ -0.89
VRK3-205ENST00000593919 C16orf74Q96GX8 76 aa9.51□□□□□ -0.89
VRK3-205ENST00000593919 C1orf43Q9BWL3 253 aa9.51□□□□□ -0.89
VRK3-205ENST00000593919 PLAC8L1A1L4L8 177 aa9.5□□□□□ -0.89
VRK3-205ENST00000593919 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.5□□□□□ -0.89
VRK3-205ENST00000593919 K7EP13 123 aa9.5□□□□□ -0.89
VRK3-205ENST00000593919 DPM2O94777 84 aa9.5□□□□□ -0.89
VRK3-205ENST00000593919 BVES-AS1Q5T3Y7 98 aa9.5□□□□□ -0.89
VRK3-205ENST00000593919 Q6ZVH6 145 aa9.5□□□□□ -0.89
VRK3-205ENST00000593919 DEFB104AQ8WTQ1 72 aa9.5□□□□□ -0.89
VRK3-205ENST00000593919 TOMM6Q96B49 74 aa9.5□□□□□ -0.89
VRK3-205ENST00000593919 SCGB3A1Q96QR1 104 aa9.5□□□□□ -0.89
VRK3-205ENST00000593919 MRPL16Q9NX20 251 aaKnown RBP9.5□□□□□ -0.89
VRK3-205ENST00000593919 MRPL35Q9NZE8 188 aaKnown RBP9.5□□□□□ -0.89
VRK3-205ENST00000593919 PTTG1IPP53801 180 aa9.49□□□□□ -0.89
VRK3-205ENST00000593919 ZNF56Q15929 161 aa9.49□□□□□ -0.89
VRK3-205ENST00000593919 PCP2Q8IVA1 136 aa9.49□□□□□ -0.89
VRK3-205ENST00000593919 BOD1L2Q8IYS8 172 aa9.49□□□□□ -0.89
VRK3-205ENST00000593919 PTH2Q96A98 100 aa9.49□□□□□ -0.89
VRK3-205ENST00000593919 A8MZ25 164 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 CRYGDP07320 174 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 RIPPLY3P57055 190 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 PIK3CD-AS1Q5SR53 167 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 C2orf66Q6UXQ4 117 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 X6R8D5 127 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 A0A087WX48 190 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 K7EMI3 77 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 UBE2V1Q13404 147 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 NOP10Q9NPE3 64 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms