RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PAX4O43316 350 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 NUDT3O95989 172 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 SMIM17P0DL12 118 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 GYPEP15421 78 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 RAB4AP20338 218 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 RAB4BP61018 213 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 MRPL51Q4U2R6 128 aaKnown RBP6.69□□□□□ -1.34
DDX39A-220ENST00000593008 ZFP2Q6ZN57 461 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 SMIM15Q7Z3B0 74 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 SH2D6Q7Z4S9 175 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 TMEM191AQ9H0A3 160 aa6.69□□□□□ -1.34
DDX39A-220ENST00000593008 DNAH10Q8IVF4 4471 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 IGHV3-38A0A0C4DH36 116 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 H3BNG1 76 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 M0QY20 66 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 LINC00694P0DN24 101 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 S100PP25815 95 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 KIAA1644Q3SXP7 199 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 FAM104BQ5XKR9 115 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 ATP5L2Q7Z4Y8 100 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 NEXN-AS1Q8NBZ9 246 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 SMCO4Q9NRQ5 59 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 PRO0255Q9UI72 69 aa6.68□□□□□ -1.34
DDX39A-220ENST00000593008 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
DDX39A-220ENST00000593008 D6R8Y8 96 aa6.67□□□□□ -1.34
DDX39A-220ENST00000593008 RHOHQ15669 191 aa6.67□□□□□ -1.34
DDX39A-220ENST00000593008 NRACQ8N912 160 aa6.67□□□□□ -1.34
DDX39A-220ENST00000593008 TRBV24-1A0A075B6N3 115 aa6.66□□□□□ -1.34
DDX39A-220ENST00000593008 TRBV6-4A0A1B0GX49 114 aa6.66□□□□□ -1.34
DDX39A-220ENST00000593008 COLCA2A8K830 154 aa6.66□□□□□ -1.34
DDX39A-220ENST00000593008 NPYP01303 97 aa6.66□□□□□ -1.34
DDX39A-220ENST00000593008 UBE2DNLQ8IWF7 75 aa6.66□□□□□ -1.34
DDX39A-220ENST00000593008 ZNRF2Q8NHG8 242 aa6.66□□□□□ -1.34
DDX39A-220ENST00000593008 PRADC1Q9BSG0 188 aa6.66□□□□□ -1.34
DDX39A-220ENST00000593008 TRAV9-1A0A075B6T8 112 aa6.65□□□□□ -1.34
DDX39A-220ENST00000593008 A0A1B0GW15 77 aa6.65□□□□□ -1.34
DDX39A-220ENST00000593008 M0R2N4 97 aa6.65□□□□□ -1.34
DDX39A-220ENST00000593008 S100A1P23297 94 aa6.65□□□□□ -1.34
DDX39A-220ENST00000593008 MRPL18Q9H0U6 180 aaKnown RBP6.65□□□□□ -1.34
DDX39A-220ENST00000593008 FRAS1Q86XX4 4008 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 IGLV2-18A0A075B6J9 118 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 H7C1H1 209 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 S100A8P05109 93 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 SRIP30626 198 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 CCL18P55774 89 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 UBE2D3P61077 147 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 UBE2D2P62837 147 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 MRPL23Q16540 153 aaKnown RBP6.64□□□□□ -1.35
DDX39A-220ENST00000593008 OR10J3Q5JRS4 329 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 RASL11AQ6T310 242 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 Q8N3U1 123 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 ICOSQ9Y6W8 199 aa6.64□□□□□ -1.35
DDX39A-220ENST00000593008 APCSP02743 223 aa6.63□□□□□ -1.35
DDX39A-220ENST00000593008 CKS2P33552 79 aa6.63□□□□□ -1.35
DDX39A-220ENST00000593008 FABP9Q0Z7S8 132 aa6.63□□□□□ -1.35
DDX39A-220ENST00000593008 IQCJQ1A5X6 159 aa6.63□□□□□ -1.35
DDX39A-220ENST00000593008 ESRGQ1W209 222 aa6.63□□□□□ -1.35
DDX39A-220ENST00000593008 FRZBQ92765 325 aa6.63□□□□□ -1.35
DDX39A-220ENST00000593008 TNFRSF6BO95407 300 aa6.62□□□□□ -1.35
DDX39A-220ENST00000593008 MRAP2Q96G30 205 aa6.62□□□□□ -1.35
DDX39A-220ENST00000593008 PRELID3AQ96N28 172 aa6.62□□□□□ -1.35
DDX39A-220ENST00000593008 GNB1LQ9BYB4 327 aa6.62□□□□□ -1.35
DDX39A-220ENST00000593008 NIT2Q9NQR4 276 aa6.62□□□□□ -1.35
DDX39A-220ENST00000593008 LINC00588Q9Y4M8 146 aa6.62□□□□□ -1.35
DDX39A-220ENST00000593008 TRAPPC1Q9Y5R8 145 aa6.62□□□□□ -1.35
DDX39A-220ENST00000593008 DNAH17Q9UFH2 4485 aa6.62□□□□□ -1.35
DDX39A-220ENST00000593008 TRBV7-3A0A075B6L6 115 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 TRBV10-1A0A0K0K1A3 114 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 LOC389332A0A1B0GUA5 103 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 SDHAF1A6NFY7 115 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 PHOX2AO14813 284 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 PPP1R17O96001 155 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 HLA-DQA1P01909 254 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 RAB5AP20339 215 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 RPL36AP83881 106 aaKnown RBP6.61□□□□□ -1.35
DDX39A-220ENST00000593008 LYPD5Q6UWN5 251 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 NTM-AS1Q6ZSK4 140 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 WFDC10BQ8IUB3 73 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 ORMDL3Q8N138 153 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 ATP6V0E2Q8NHE4 81 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 RPL36ALQ969Q0 106 aaKnown RBP6.61□□□□□ -1.35
DDX39A-220ENST00000593008 TMEM70Q9BUB7 260 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 TNFRSF18Q9Y5U5 241 aa6.61□□□□□ -1.35
DDX39A-220ENST00000593008 BIRC6Q9NR09 4857 aa6.6□□□□□ -1.35
DDX39A-220ENST00000593008 TRBV6-5A0A0K0K1A5 114 aa6.6□□□□□ -1.35
DDX39A-220ENST00000593008 TSHBP01222 138 aa6.6□□□□□ -1.35
DDX39A-220ENST00000593008 TRGC2P03986 189 aa6.6□□□□□ -1.35
DDX39A-220ENST00000593008 TMEM97Q5BJF2 176 aa6.6□□□□□ -1.35
DDX39A-220ENST00000593008 ALKBH7Q9BT30 221 aaPredicted RBP6.6□□□□□ -1.35
DDX39A-220ENST00000593008 ST20Q9HBF5 79 aa6.6□□□□□ -1.35
DDX39A-220ENST00000593008 FAT2Q9NYQ8 4349 aa6.6□□□□□ -1.35
DDX39A-220ENST00000593008 TRAV9-2A0A087WT02 112 aa6.59□□□□□ -1.35
DDX39A-220ENST00000593008 K7EP13 123 aa6.59□□□□□ -1.35
DDX39A-220ENST00000593008 MT-ND6P03923 174 aa6.59□□□□□ -1.35
DDX39A-220ENST00000593008 POLR2KP53803 58 aaKnown RBP6.59□□□□□ -1.35
DDX39A-220ENST00000593008 SUMO2P61956 95 aaKnown RBP6.59□□□□□ -1.35
DDX39A-220ENST00000593008 DNAJC30Q96LL9 226 aa6.59□□□□□ -1.35
DDX39A-220ENST00000593008 SMIM2Q9BVW6 85 aa6.59□□□□□ -1.35
DDX39A-220ENST00000593008 TCAPO15273 167 aa6.58□□□□□ -1.36
DDX39A-220ENST00000593008 PKIAP61925 76 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms