RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 TENM4Q6N022 2769 aa7.56□□□□□ -1.2
VPS25-206ENST00000591584 FLNAP21333 2647 aaKnown RBP7.56□□□□□ -1.2
VPS25-206ENST00000591584 MUC4Q99102 2169 aa7.55□□□□□ -1.2
VPS25-206ENST00000591584 CRYBA4P53673 196 aa7.55□□□□□ -1.2
VPS25-206ENST00000591584 DAZ2Q13117 558 aaKnown RBP7.55□□□□□ -1.2
VPS25-206ENST00000591584 CFAP126Q5VTH2 177 aa7.55□□□□□ -1.2
VPS25-206ENST00000591584 HIST2H2BDQ6DRA6 164 aa7.55□□□□□ -1.2
VPS25-206ENST00000591584 BOD1L2Q8IYS8 172 aa7.55□□□□□ -1.2
VPS25-206ENST00000591584 IL17DQ8TAD2 202 aa7.55□□□□□ -1.2
VPS25-206ENST00000591584 C16orf74Q96GX8 76 aa7.55□□□□□ -1.2
VPS25-206ENST00000591584 DKK2Q9UBU2 259 aa7.55□□□□□ -1.2
VPS25-206ENST00000591584 HHLA3Q9XRX5 114 aa7.55□□□□□ -1.2
VPS25-206ENST00000591584 CHTOPQ9Y3Y2 248 aaKnown RBP7.55□□□□□ -1.2
VPS25-206ENST00000591584 ZNF469Q96JG9 3925 aaPredicted RBP7.55□□□□□ -1.2
VPS25-206ENST00000591584 SONP18583 2426 aaKnown RBP7.54□□□□□ -1.2
VPS25-206ENST00000591584 IGHV3-53P01767 116 aa7.54□□□□□ -1.2
VPS25-206ENST00000591584 GTSCR1Q86UQ5 136 aa7.54□□□□□ -1.2
VPS25-206ENST00000591584 RNASE8Q8TDE3 154 aaKnown RBP7.54□□□□□ -1.2
VPS25-206ENST00000591584 TLN2Q9Y4G6 2542 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 TRBV10-1A0A0K0K1A3 114 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 IGIPA6NJ69 53 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 AZU1P20160 251 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 PMVKQ15126 192 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 STPG4Q8N801 248 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 OR4C5Q8NGB2 326 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 BAALCQ8WXS3 180 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 CITED1Q99966 193 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 OVOL2Q9BRP0 275 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 MRPL35Q9NZE8 188 aaKnown RBP7.53□□□□□ -1.2
VPS25-206ENST00000591584 TP53TG1Q9Y2A0 90 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 MXRA5Q9NR99 2828 aa7.53□□□□□ -1.2
VPS25-206ENST00000591584 MYO9AB2RTY4 2548 aa7.52□□□□□ -1.21
VPS25-206ENST00000591584 MAP1AP78559 2803 aaPredicted RBP7.52□□□□□ -1.21
VPS25-206ENST00000591584 TRAV4A0A0B4J268 109 aa7.52□□□□□ -1.21
VPS25-206ENST00000591584 RRN3P1Q2M238 152 aa7.52□□□□□ -1.21
VPS25-206ENST00000591584 TMEM97Q5BJF2 176 aa7.52□□□□□ -1.21
VPS25-206ENST00000591584 ZC2HC1BQ5TFG8 222 aa7.52□□□□□ -1.21
VPS25-206ENST00000591584 C20orf203Q8NBC4 194 aa7.52□□□□□ -1.21
VPS25-206ENST00000591584 PYGO1Q9Y3Y4 419 aa7.52□□□□□ -1.21
VPS25-206ENST00000591584 AGRNO00468 2067 aa7.51□□□□□ -1.21
VPS25-206ENST00000591584 SMIM9A6NGZ8 99 aa7.51□□□□□ -1.21
VPS25-206ENST00000591584 PRSS29PA6NIE9 313 aa7.51□□□□□ -1.21
VPS25-206ENST00000591584 TSHBP01222 138 aa7.51□□□□□ -1.21
VPS25-206ENST00000591584 FGF6P10767 208 aa7.51□□□□□ -1.21
VPS25-206ENST00000591584 SMAGPQ0VAQ4 97 aa7.51□□□□□ -1.21
VPS25-206ENST00000591584 CSNK1G2-AS1Q8NCQ2 148 aa7.51□□□□□ -1.21
VPS25-206ENST00000591584 WFDC9Q8NEX5 89 aa7.51□□□□□ -1.21
VPS25-206ENST00000591584 HIGD1BQ9P298 99 aa7.51□□□□□ -1.21
VPS25-206ENST00000591584 ZMAT5Q9UDW3 170 aaKnown RBP7.51□□□□□ -1.21
VPS25-206ENST00000591584 ACANP16112 2415 aa7.5□□□□□ -1.21
VPS25-206ENST00000591584 SORL1Q92673 2214 aa7.5□□□□□ -1.21
VPS25-206ENST00000591584 IGHV3OR16-12A0A075B7B8 117 aa7.5□□□□□ -1.21
VPS25-206ENST00000591584 TRGV1A0A0A0MS02 117 aa7.5□□□□□ -1.21
VPS25-206ENST00000591584 TMEM238LA0A1B0GVL6 79 aa7.5□□□□□ -1.21
VPS25-206ENST00000591584 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
VPS25-206ENST00000591584 NMUP48645 174 aa7.5□□□□□ -1.21
VPS25-206ENST00000591584 HERVK_113P61574 105 aa7.5□□□□□ -1.21
VPS25-206ENST00000591584 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
VPS25-206ENST00000591584 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
VPS25-206ENST00000591584 FASNP49327 2511 aaKnown RBP7.49□□□□□ -1.21
VPS25-206ENST00000591584 AKAP9Q99996 3911 aa7.49□□□□□ -1.21
VPS25-206ENST00000591584 A0A1B0GV90 55 aa7.49□□□□□ -1.21
VPS25-206ENST00000591584 P0DMU3 169 aa7.49□□□□□ -1.21
VPS25-206ENST00000591584 FAM231AP0DMU4 169 aa7.49□□□□□ -1.21
VPS25-206ENST00000591584 FAM231CP0DMU5 169 aa7.49□□□□□ -1.21
VPS25-206ENST00000591584 RPL35AP18077 110 aaKnown RBP7.49□□□□□ -1.21
VPS25-206ENST00000591584 SEC11AP67812 179 aa7.49□□□□□ -1.21
VPS25-206ENST00000591584 BATFQ16520 125 aa7.49□□□□□ -1.21
VPS25-206ENST00000591584 NEGR1Q7Z3B1 354 aa7.49□□□□□ -1.21
VPS25-206ENST00000591584 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.49□□□□□ -1.21
VPS25-206ENST00000591584 KIR2DL5BQ8NHK3 375 aa7.49□□□□□ -1.21
VPS25-206ENST00000591584 IGHV3-73A0A0B4J1V6 119 aa7.48□□□□□ -1.21
VPS25-206ENST00000591584 WIPF1O43516 503 aa7.48□□□□□ -1.21
VPS25-206ENST00000591584 HINT1P49773 126 aaPredicted RBP7.48□□□□□ -1.21
VPS25-206ENST00000591584 RPL36AP83881 106 aaKnown RBP7.48□□□□□ -1.21
VPS25-206ENST00000591584 HSD52Q0P140 79 aa7.48□□□□□ -1.21
VPS25-206ENST00000591584 COTL1Q14019 142 aa7.48□□□□□ -1.21
VPS25-206ENST00000591584 BVES-AS1Q5T3Y7 98 aa7.48□□□□□ -1.21
VPS25-206ENST00000591584 DAZ4Q86SG3 579 aaKnown RBP7.48□□□□□ -1.21
VPS25-206ENST00000591584 RPL36ALQ969Q0 106 aaKnown RBP7.48□□□□□ -1.21
VPS25-206ENST00000591584 VCX2Q9H322 139 aa7.48□□□□□ -1.21
VPS25-206ENST00000591584 DAZ3Q9NR90 486 aaKnown RBP7.48□□□□□ -1.21
VPS25-206ENST00000591584 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
VPS25-206ENST00000591584 ITPR2Q14571 2701 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 TRBV7-3A0A075B6L6 115 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 TRBV6-4A0A1B0GX49 114 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 C11orf86A6NJI1 115 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 E9PLD3 99 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 K7EQD1 137 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 PRM2P04554 102 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 APOC4P55056 127 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 TAL2Q16559 108 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 C21orf62-AS1Q17RA5 79 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 MPV17L2Q567V2 206 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 C2orf91Q6ZV80 131 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 NFE4Q86UQ8 179 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 OR11H2Q8NH07 326 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 TIMM21Q9BVV7 248 aa7.47□□□□□ -1.21
VPS25-206ENST00000591584 RPL39P62891 51 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms