RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 BRD3OSQ6XYD6 125 aa8.1□□□□□ -1.11
VPS4B-206ENST00000591475 NDUFA11Q86Y39 141 aa8.1□□□□□ -1.11
VPS4B-206ENST00000591475 FLNBO75369 2602 aaKnown RBP8.1□□□□□ -1.11
VPS4B-206ENST00000591475 FLNAP21333 2647 aaKnown RBP8.1□□□□□ -1.11
VPS4B-206ENST00000591475 A0A1B0GV72 72 aa8.1□□□□□ -1.11
VPS4B-206ENST00000591475 F5H697 171 aa8.1□□□□□ -1.11
VPS4B-206ENST00000591475 IGHG2P01859 326 aa8.1□□□□□ -1.11
VPS4B-206ENST00000591475 ID1P41134 155 aa8.1□□□□□ -1.11
VPS4B-206ENST00000591475 RPL39P62891 51 aaKnown RBP8.1□□□□□ -1.11
VPS4B-206ENST00000591475 LY6EQ16553 131 aa8.09□□□□□ -1.11
VPS4B-206ENST00000591475 TMEM170BQ5T4T1 132 aa8.09□□□□□ -1.11
VPS4B-206ENST00000591475 JPT2Q9H910 190 aa8.09□□□□□ -1.11
VPS4B-206ENST00000591475 DAZ1Q9NQZ3 744 aaKnown RBP8.09□□□□□ -1.11
VPS4B-206ENST00000591475 CR1P17927 2039 aa8.09□□□□□ -1.11
VPS4B-206ENST00000591475 A0A087WWL8 130 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 SDHAF1A6NFY7 115 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 LGALS9O00182 355 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 IGHV3-30P01768 117 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 IGHV3-30-5P0DP03 117 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 SFTA2Q6UW10 78 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 SLC25A29Q8N8R3 303 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 ZNF418Q8TF45 676 aaPredicted RBP8.08□□□□□ -1.12
VPS4B-206ENST00000591475 OTOGQ6ZRI0 2925 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 TRBV6-5A0A0K0K1A5 114 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 TRBV27A0A0K0K1C4 114 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 SRD5A1P18405 259 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 TSPEAR-AS2P59090 65 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
VPS4B-206ENST00000591475 MYO9AB2RTY4 2548 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 TRAV12-3A0A0B4J271 114 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 A6NDX4 124 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 LGALS3P17931 250 aaKnown RBP8.07□□□□□ -1.12
VPS4B-206ENST00000591475 TCTEX1D4Q5JR98 221 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 Q6ZS46 218 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 TEX29Q8N6K0 151 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 SYT8Q8NBV8 401 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 ZNRF2Q8NHG8 242 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 DEFB104AQ8WTQ1 72 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 H3BUX3 64 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 J3QQQ9 107 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 K7EMT4 169 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 IGLV1-40P01703 118 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 CFC1BP0CG36 223 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 CFC1P0CG37 223 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 NFE4Q86UQ8 179 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 C10orf126Q8N4M7 172 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 PPDPFLQ8WWR9 84 aa8.07□□□□□ -1.12
VPS4B-206ENST00000591475 TCL1BO95988 128 aa8.06□□□□□ -1.12
VPS4B-206ENST00000591475 FSHBP01225 129 aa8.06□□□□□ -1.12
VPS4B-206ENST00000591475 TEN1Q86WV5 123 aa8.06□□□□□ -1.12
VPS4B-206ENST00000591475 VCX2Q9H322 139 aa8.06□□□□□ -1.12
VPS4B-206ENST00000591475 PRO1854Q9UHT4 67 aa8.06□□□□□ -1.12
VPS4B-206ENST00000591475 CSPG4Q6UVK1 2322 aa8.06□□□□□ -1.12
VPS4B-206ENST00000591475 RHOHQ15669 191 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 ZNF56Q15929 161 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 NSUN5P1Q3KNT7 163 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 FAM74A4Q5TZK3 123 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 DCANP1Q8TF63 244 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 WFDC12Q8WWY7 111 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 C9orf85Q96MD7 179 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 ODF3Q96PU9 254 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 AMELXQ99217 191 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 CDIP1Q9H305 208 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 ZNF256Q9Y2P7 627 aaPredicted RBP8.05□□□□□ -1.12
VPS4B-206ENST00000591475 IGHV3-16A0A0C4DH30 117 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 A8MWV9 139 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 LEPROTO15243 131 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 CKS1BP61024 79 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 BLCAPP62952 87 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 SBSPONQ8IVN8 264 aa8.05□□□□□ -1.12
VPS4B-206ENST00000591475 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
VPS4B-206ENST00000591475 MXRA5Q9NR99 2828 aa8.04□□□□□ -1.12
VPS4B-206ENST00000591475 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
VPS4B-206ENST00000591475 EDN2P20800 178 aa8.04□□□□□ -1.12
VPS4B-206ENST00000591475 TRPT1Q86TN4 253 aaKnown RBP8.04□□□□□ -1.12
VPS4B-206ENST00000591475 PTH2Q96A98 100 aa8.04□□□□□ -1.12
VPS4B-206ENST00000591475 CARD19Q96LW7 228 aa8.04□□□□□ -1.12
VPS4B-206ENST00000591475 TLN2Q9Y4G6 2542 aa8.04□□□□□ -1.12
VPS4B-206ENST00000591475 TMEM223A0PJW6 202 aa8.03□□□□□ -1.12
VPS4B-206ENST00000591475 M0QY20 66 aa8.03□□□□□ -1.12
VPS4B-206ENST00000591475 CRYBA4P53673 196 aa8.03□□□□□ -1.12
VPS4B-206ENST00000591475 SPINK8P0C7L1 97 aa8.03□□□□□ -1.12
VPS4B-206ENST00000591475 CFHR3Q02985 330 aa8.03□□□□□ -1.12
VPS4B-206ENST00000591475 KRTAP1-1Q07627 177 aa8.03□□□□□ -1.12
VPS4B-206ENST00000591475 ACANP16112 2415 aa8.02□□□□□ -1.12
VPS4B-206ENST00000591475 DEFB112Q30KQ8 113 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 MDFICQ9P1T7 246 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 IGHV1OR15-1A0A075B7D0 117 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 A0A0J9YX75 114 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 A4D1N5 150 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 ZNF688P0C7X2 276 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 Q6ZUT4 128 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 Q8N1Y9 231 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 C20orf203Q8NBC4 194 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 OPRPNQ99935 248 aaPredicted RBP8.02□□□□□ -1.13
VPS4B-206ENST00000591475 YAE1D1Q9NRH1 226 aa8.02□□□□□ -1.13
VPS4B-206ENST00000591475 TRAV12-2A0A075B6T6 113 aa8.01□□□□□ -1.13
VPS4B-206ENST00000591475 A0A0B4J2C4 111 aa8.01□□□□□ -1.13
VPS4B-206ENST00000591475 I3L3M4 83 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms