RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 SMIM17P0DL12 118 aa14.34□□□□□ -0.11
CIRBP-229ENST00000590704 TMEM191AQ9H0A3 160 aa14.33□□□□□ -0.12
CIRBP-229ENST00000590704 CARHSP1Q9Y2V2 147 aaKnown RBP14.33□□□□□ -0.12
CIRBP-229ENST00000590704 TRAV26-2A0A0B4J265 109 aa14.32□□□□□ -0.12
CIRBP-229ENST00000590704 NBDYA0A0U1RRE5 68 aa14.32□□□□□ -0.12
CIRBP-229ENST00000590704 A0A1B0GXF2 115 aa14.32□□□□□ -0.12
CIRBP-229ENST00000590704 ANAPC16Q96DE5 110 aa14.32□□□□□ -0.12
CIRBP-229ENST00000590704 RPL36AP83881 106 aaKnown RBP14.31□□□□□ -0.12
CIRBP-229ENST00000590704 LELP1Q5T871 98 aa14.31□□□□□ -0.12
CIRBP-229ENST00000590704 RPL36ALQ969Q0 106 aaKnown RBP14.31□□□□□ -0.12
CIRBP-229ENST00000590704 PPP1R2P9O14990 202 aa14.31□□□□□ -0.12
CIRBP-229ENST00000590704 SIVA1O15304 175 aa14.31□□□□□ -0.12
CIRBP-229ENST00000590704 RAB4AP20338 218 aa14.31□□□□□ -0.12
CIRBP-229ENST00000590704 NTM-AS1Q6ZSK4 140 aa14.31□□□□□ -0.12
CIRBP-229ENST00000590704 MT-ND4LP03901 98 aa14.3□□□□□ -0.12
CIRBP-229ENST00000590704 RASL11AQ6T310 242 aa14.3□□□□□ -0.12
CIRBP-229ENST00000590704 IGHV3-38A0A0C4DH36 116 aa14.29□□□□□ -0.12
CIRBP-229ENST00000590704 RTL8CO15255 209 aa14.29□□□□□ -0.12
CIRBP-229ENST00000590704 DNAH10OSP0CZ25 163 aa14.29□□□□□ -0.12
CIRBP-229ENST00000590704 RIGQ13278 110 aa14.29□□□□□ -0.12
CIRBP-229ENST00000590704 AMN1Q8IY45 258 aa14.29□□□□□ -0.12
CIRBP-229ENST00000590704 Q8N3U1 123 aa14.28□□□□□ -0.12
CIRBP-229ENST00000590704 RPL39LQ96EH5 51 aaKnown RBP14.28□□□□□ -0.12
CIRBP-229ENST00000590704 NIT2Q9NQR4 276 aa14.28□□□□□ -0.12
CIRBP-229ENST00000590704 DNAJC30Q96LL9 226 aa14.27□□□□□ -0.12
CIRBP-229ENST00000590704 MRPL54Q6P161 138 aaKnown RBP14.26□□□□□ -0.13
CIRBP-229ENST00000590704 BORCS7Q96B45 105 aa14.26□□□□□ -0.13
CIRBP-229ENST00000590704 RPS10P46783 165 aaKnown RBP14.25□□□□□ -0.13
CIRBP-229ENST00000590704 FAM104BQ5XKR9 115 aa14.25□□□□□ -0.13
CIRBP-229ENST00000590704 EPPK1P58107 5090 aaKnown RBP14.25□□□□□ -0.13
CIRBP-229ENST00000590704 CAMPP49913 170 aa14.25□□□□□ -0.13
CIRBP-229ENST00000590704 SLC7A5P1Q8MH63 180 aa14.25□□□□□ -0.13
CIRBP-229ENST00000590704 CLRN3Q8NCR9 226 aa14.25□□□□□ -0.13
CIRBP-229ENST00000590704 TNFRSF18Q9Y5U5 241 aa14.25□□□□□ -0.13
CIRBP-229ENST00000590704 DNAH11Q96DT5 4516 aa14.24□□□□□ -0.13
CIRBP-229ENST00000590704 C7orf77A4D0Y5 90 aa14.24□□□□□ -0.13
CIRBP-229ENST00000590704 H7C1H1 209 aa14.24□□□□□ -0.13
CIRBP-229ENST00000590704 LINC01556Q5JQF7 62 aa14.24□□□□□ -0.13
CIRBP-229ENST00000590704 SMIM15Q7Z3B0 74 aa14.24□□□□□ -0.13
CIRBP-229ENST00000590704 TRBV6-8A0A0A6YYG3 113 aa14.23□□□□□ -0.13
CIRBP-229ENST00000590704 TRBV6-5A0A0K0K1A5 114 aa14.23□□□□□ -0.13
CIRBP-229ENST00000590704 MRPL51Q4U2R6 128 aaKnown RBP14.23□□□□□ -0.13
CIRBP-229ENST00000590704 OR10J3Q5JRS4 329 aa14.23□□□□□ -0.13
CIRBP-229ENST00000590704 DAZ4Q86SG3 579 aaKnown RBP14.23□□□□□ -0.13
CIRBP-229ENST00000590704 FRZBQ92765 325 aa14.23□□□□□ -0.13
CIRBP-229ENST00000590704 DAZ3Q9NR90 486 aaKnown RBP14.23□□□□□ -0.13
CIRBP-229ENST00000590704 SMKR1H3BMG3 65 aa14.22□□□□□ -0.13
CIRBP-229ENST00000590704 NRACQ8N912 160 aa14.22□□□□□ -0.13
CIRBP-229ENST00000590704 DEFB104AQ8WTQ1 72 aa14.22□□□□□ -0.13
CIRBP-229ENST00000590704 IMMP2LQ96T52 175 aa14.22□□□□□ -0.13
CIRBP-229ENST00000590704 CTDSP1Q9GZU7 261 aa14.22□□□□□ -0.13
CIRBP-229ENST00000590704 PKD1P98161 4303 aa14.21□□□□□ -0.13
CIRBP-229ENST00000590704 A0A087WWC5 75 aa14.21□□□□□ -0.13
CIRBP-229ENST00000590704 A0A1B0GW15 77 aa14.21□□□□□ -0.13
CIRBP-229ENST00000590704 HBBP68871 147 aa14.21□□□□□ -0.13
CIRBP-229ENST00000590704 ATP5L2Q7Z4Y8 100 aa14.21□□□□□ -0.13
CIRBP-229ENST00000590704 NIT1Q86X76 327 aa14.21□□□□□ -0.13
CIRBP-229ENST00000590704 TRAV8-6A0A0B4J262 113 aa14.2□□□□□ -0.14
CIRBP-229ENST00000590704 Q6ZRN7 208 aaPredicted RBP14.2□□□□□ -0.14
CIRBP-229ENST00000590704 TMEM242Q9NWH2 141 aa14.2□□□□□ -0.14
CIRBP-229ENST00000590704 POLR2KP53803 58 aaKnown RBP14.19□□□□□ -0.14
CIRBP-229ENST00000590704 MRAP2Q96G30 205 aa14.19□□□□□ -0.14
CIRBP-229ENST00000590704 NCR2O95944 276 aa14.18□□□□□ -0.14
CIRBP-229ENST00000590704 C1orf134Q5TEV5 83 aa14.18□□□□□ -0.14
CIRBP-229ENST00000590704 C6orf223Q8N319 242 aa14.18□□□□□ -0.14
CIRBP-229ENST00000590704 IQCJQ1A5X6 159 aa14.18□□□□□ -0.14
CIRBP-229ENST00000590704 TTC32Q5I0X7 151 aa14.18□□□□□ -0.14
CIRBP-229ENST00000590704 SDHAF1A6NFY7 115 aa14.17□□□□□ -0.14
CIRBP-229ENST00000590704 IGHV3-30P01768 117 aa14.17□□□□□ -0.14
CIRBP-229ENST00000590704 IGHV3-33P01772 117 aa14.17□□□□□ -0.14
CIRBP-229ENST00000590704 APOC3P02656 99 aa14.17□□□□□ -0.14
CIRBP-229ENST00000590704 IGHV3-30-3P0DP02 117 aa14.17□□□□□ -0.14
CIRBP-229ENST00000590704 IGHV3-30-5P0DP03 117 aa14.17□□□□□ -0.14
CIRBP-229ENST00000590704 BTF3L4Q96K17 158 aa14.17□□□□□ -0.14
CIRBP-229ENST00000590704 IBA57-AS1B1ANH7 110 aa14.16□□□□□ -0.14
CIRBP-229ENST00000590704 RHEBQ15382 184 aa14.16□□□□□ -0.14
CIRBP-229ENST00000590704 TMEM70Q9BUB7 260 aa14.16□□□□□ -0.14
CIRBP-229ENST00000590704 HECTD4Q9Y4D8 3996 aa14.15□□□□□ -0.14
CIRBP-229ENST00000590704 K7EP13 123 aa14.15□□□□□ -0.14
CIRBP-229ENST00000590704 ATRAIDQ6UW56 229 aa14.15□□□□□ -0.14
CIRBP-229ENST00000590704 TRBV24-1A0A075B6N3 115 aa14.14□□□□□ -0.15
CIRBP-229ENST00000590704 RPS10P5Q9NQ39 176 aa14.14□□□□□ -0.15
CIRBP-229ENST00000590704 A0A1B0GVY2 172 aa14.13□□□□□ -0.15
CIRBP-229ENST00000590704 BTF3P20290 206 aaKnown RBP14.13□□□□□ -0.15
CIRBP-229ENST00000590704 TMEM136Q6ZRR5 245 aa14.13□□□□□ -0.15
CIRBP-229ENST00000590704 PKHD1P08F94 4074 aa14.13□□□□□ -0.15
CIRBP-229ENST00000590704 TRBV27A0A0K0K1C4 114 aa14.12□□□□□ -0.15
CIRBP-229ENST00000590704 S100A8P05109 93 aa14.12□□□□□ -0.15
CIRBP-229ENST00000590704 MPV17L2Q567V2 206 aa14.12□□□□□ -0.15
CIRBP-229ENST00000590704 TMEM97Q5BJF2 176 aa14.12□□□□□ -0.15
CIRBP-229ENST00000590704 URGCP-MRPS24S4R325 110 aa14.12□□□□□ -0.15
CIRBP-229ENST00000590704 TRAV9-1A0A075B6T8 112 aa14.12□□□□□ -0.15
CIRBP-229ENST00000590704 D6R8Y8 96 aa14.12□□□□□ -0.15
CIRBP-229ENST00000590704 TNP2Q05952 138 aa14.12□□□□□ -0.15
CIRBP-229ENST00000590704 CHCHD7Q9BUK0 85 aa14.12□□□□□ -0.15
CIRBP-229ENST00000590704 BIRC6Q9NR09 4857 aa14.11□□□□□ -0.15
CIRBP-229ENST00000590704 TRAV9-2A0A087WT02 112 aa14.11□□□□□ -0.15
CIRBP-229ENST00000590704 IGHV1-24A0A0C4DH33 117 aa14.11□□□□□ -0.15
CIRBP-229ENST00000590704 TSHBP01222 138 aa14.11□□□□□ -0.15
CIRBP-229ENST00000590704 SVBPQ8N300 66 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms