RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 LAMA2P24043 3122 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-215ENST00000590574 TEN1Q86WV5 123 aa12.9□□□□□ -0.35
SMARCA4-215ENST00000590574 NOP10Q9NPE3 64 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-215ENST00000590574 LAMA3Q16787 3333 aa12.89□□□□□ -0.35
SMARCA4-215ENST00000590574 PFN2P35080 140 aa12.89□□□□□ -0.35
SMARCA4-215ENST00000590574 ANKRD29Q8N6D5 301 aa12.89□□□□□ -0.35
SMARCA4-215ENST00000590574 PTH2Q96A98 100 aa12.89□□□□□ -0.35
SMARCA4-215ENST00000590574 A0A096LNJ9 63 aa12.88□□□□□ -0.35
SMARCA4-215ENST00000590574 OVOL2Q9BRP0 275 aa12.88□□□□□ -0.35
SMARCA4-215ENST00000590574 CEMP1Q6PRD7 247 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-215ENST00000590574 DNAJC30Q96LL9 226 aa12.87□□□□□ -0.35
SMARCA4-215ENST00000590574 SPAG8Q99932 426 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-215ENST00000590574 SS18Q15532 418 aa12.87□□□□□ -0.35
SMARCA4-215ENST00000590574 S100A7L2Q5SY68 101 aa12.87□□□□□ -0.35
SMARCA4-215ENST00000590574 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
SMARCA4-215ENST00000590574 IGHG4P01861 327 aa12.86□□□□□ -0.35
SMARCA4-215ENST00000590574 P0DMU3 169 aa12.86□□□□□ -0.35
SMARCA4-215ENST00000590574 FAM231AP0DMU4 169 aa12.86□□□□□ -0.35
SMARCA4-215ENST00000590574 FAM231CP0DMU5 169 aa12.86□□□□□ -0.35
SMARCA4-215ENST00000590574 DAND5Q8N907 189 aa12.86□□□□□ -0.35
SMARCA4-215ENST00000590574 ICOSQ9Y6W8 199 aa12.86□□□□□ -0.35
SMARCA4-215ENST00000590574 TMEM89A2RUT3 159 aa12.86□□□□□ -0.35
SMARCA4-215ENST00000590574 SPANXB1Q9NS25 103 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-215ENST00000590574 TCL1BO95988 128 aa12.85□□□□□ -0.35
SMARCA4-215ENST00000590574 RNASE3P12724 160 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-215ENST00000590574 RNF152Q8N8N0 203 aa12.85□□□□□ -0.35
SMARCA4-215ENST00000590574 HHLA3Q9XRX5 114 aa12.84□□□□□ -0.35
SMARCA4-215ENST00000590574 IGHV4-4A0A075B6R2 117 aa12.84□□□□□ -0.35
SMARCA4-215ENST00000590574 LINC01620Q4KN68 170 aa12.84□□□□□ -0.35
SMARCA4-215ENST00000590574 CCL24O00175 119 aa12.83□□□□□ -0.35
SMARCA4-215ENST00000590574 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.35
SMARCA4-215ENST00000590574 IFITM1P13164 125 aa12.83□□□□□ -0.35
SMARCA4-215ENST00000590574 C15orf53Q8NAA6 179 aa12.83□□□□□ -0.35
SMARCA4-215ENST00000590574 C10orf99Q6UWK7 81 aa12.83□□□□□ -0.36
SMARCA4-215ENST00000590574 ODF3Q96PU9 254 aa12.83□□□□□ -0.36
SMARCA4-215ENST00000590574 COX8CQ7Z4L0 72 aa12.82□□□□□ -0.36
SMARCA4-215ENST00000590574 ATP6V0E2Q8NHE4 81 aa12.82□□□□□ -0.36
SMARCA4-215ENST00000590574 K7EQD1 137 aa12.82□□□□□ -0.36
SMARCA4-215ENST00000590574 K7EQG2 157 aa12.82□□□□□ -0.36
SMARCA4-215ENST00000590574 PRB1P04280 392 aa12.82□□□□□ -0.36
SMARCA4-215ENST00000590574 LGALS9O00182 355 aa12.82□□□□□ -0.36
SMARCA4-215ENST00000590574 TMEM61Q8N0U2 210 aa12.82□□□□□ -0.36
SMARCA4-215ENST00000590574 IGHV1-58A0A0C4DH39 117 aa12.82□□□□□ -0.36
SMARCA4-215ENST00000590574 A0A0J9YY99 117 aa12.82□□□□□ -0.36
SMARCA4-215ENST00000590574 Q6ZS46 218 aa12.81□□□□□ -0.36
SMARCA4-215ENST00000590574 UNC80Q8N2C7 3258 aa12.81□□□□□ -0.36
SMARCA4-215ENST00000590574 TRAV13-2A0A0B4J235 113 aa12.81□□□□□ -0.36
SMARCA4-215ENST00000590574 DSCAML1Q8TD84 2053 aa12.8□□□□□ -0.36
SMARCA4-215ENST00000590574 M0QY20 66 aa12.8□□□□□ -0.36
SMARCA4-215ENST00000590574 INAFM2P0DMQ5 153 aa12.8□□□□□ -0.36
SMARCA4-215ENST00000590574 DEFB113Q30KQ7 82 aa12.8□□□□□ -0.36
SMARCA4-215ENST00000590574 SLC25A29Q8N8R3 303 aa12.8□□□□□ -0.36
SMARCA4-215ENST00000590574 NFE4Q86UQ8 179 aa12.8□□□□□ -0.36
SMARCA4-215ENST00000590574 HIST1H4AP62805 103 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-215ENST00000590574 DOPEY2Q9Y3R5 2298 aa12.79□□□□□ -0.36
SMARCA4-215ENST00000590574 A0A0J9YXY3 114 aa12.79□□□□□ -0.36
SMARCA4-215ENST00000590574 PRORYQ9H606 182 aa12.79□□□□□ -0.36
SMARCA4-215ENST00000590574 TRANK1O15050 2925 aa12.79□□□□□ -0.36
SMARCA4-215ENST00000590574 A0A096LPF7 62 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 CRYBA4P53673 196 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 Q6ZUT4 128 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 TMEM223A0PJW6 202 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 NXPH4O95158 308 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 CLEC2BQ92478 149 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 TRBV7-3A0A075B6L6 115 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 ZNF22P17026 224 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 UFSP1Q6NVU6 142 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 C4orf3Q8WVX3 66 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 VSIG2Q96IQ7 327 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 PSMG3-AS1Q96PY0 264 aa12.78□□□□□ -0.36
SMARCA4-215ENST00000590574 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.36
SMARCA4-215ENST00000590574 DAZ2Q13117 558 aaKnown RBP12.77□□□□□ -0.36
SMARCA4-215ENST00000590574 DAZ4Q86SG3 579 aaKnown RBP12.77□□□□□ -0.36
SMARCA4-215ENST00000590574 DAZ3Q9NR90 486 aaKnown RBP12.77□□□□□ -0.36
SMARCA4-215ENST00000590574 TLN1Q9Y490 2541 aaKnown RBP12.77□□□□□ -0.36
SMARCA4-215ENST00000590574 CLPSL2Q6UWE3 100 aa12.77□□□□□ -0.36
SMARCA4-215ENST00000590574 IGLV4-3A0A075B6K6 122 aa12.77□□□□□ -0.37
SMARCA4-215ENST00000590574 HERV-K104P63124 156 aa12.77□□□□□ -0.37
SMARCA4-215ENST00000590574 ZMAT4Q9H898 229 aa12.77□□□□□ -0.37
SMARCA4-215ENST00000590574 MAP6D1Q9H9H5 199 aa12.77□□□□□ -0.37
SMARCA4-215ENST00000590574 KLLNB2CW77 178 aa12.77□□□□□ -0.37
SMARCA4-215ENST00000590574 TRBV27A0A0K0K1C4 114 aa12.76□□□□□ -0.37
SMARCA4-215ENST00000590574 BAALC-AS2P0C853 105 aa12.76□□□□□ -0.37
SMARCA4-215ENST00000590574 TRBV10-2A0A0K0K1G8 114 aa12.75□□□□□ -0.37
SMARCA4-215ENST00000590574 A0A1W2PPR1 153 aa12.75□□□□□ -0.37
SMARCA4-215ENST00000590574 LAMTOR3Q9UHA4 124 aa12.75□□□□□ -0.37
SMARCA4-215ENST00000590574 IGF2RP11717 2491 aa12.75□□□□□ -0.37
SMARCA4-215ENST00000590574 CDH23Q9H251 3354 aa12.75□□□□□ -0.37
SMARCA4-215ENST00000590574 A0A0B4J2C4 111 aa12.75□□□□□ -0.37
SMARCA4-215ENST00000590574 PSMB8P28062 276 aa12.75□□□□□ -0.37
SMARCA4-215ENST00000590574 PROK1P58294 105 aa12.75□□□□□ -0.37
SMARCA4-215ENST00000590574 EDN2P20800 178 aa12.74□□□□□ -0.37
SMARCA4-215ENST00000590574 EDA2RQ9HAV5 297 aa12.74□□□□□ -0.37
SMARCA4-215ENST00000590574 TINCRA0A1B0GVN0 87 aa12.74□□□□□ -0.37
SMARCA4-215ENST00000590574 XCL1P47992 114 aa12.74□□□□□ -0.37
SMARCA4-215ENST00000590574 POLR2KP53803 58 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-215ENST00000590574 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
SMARCA4-215ENST00000590574 C16orf74Q96GX8 76 aa12.74□□□□□ -0.37
SMARCA4-215ENST00000590574 IGLV1-40P01703 118 aa12.73□□□□□ -0.37
SMARCA4-215ENST00000590574 MIAQ16674 131 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms