RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 M0R2P5 195 aa11.4□□□□□ -0.58
CIRBP-228ENST00000590347 LY6HO94772 140 aa11.4□□□□□ -0.58
CIRBP-228ENST00000590347 IGLV1-47P01700 117 aa11.4□□□□□ -0.58
CIRBP-228ENST00000590347 GAGE2AQ6NT46 116 aa11.4□□□□□ -0.58
CIRBP-228ENST00000590347 TRAV13-1A0A0B4J241 112 aa11.4□□□□□ -0.59
CIRBP-228ENST00000590347 IGIPA6NJ69 53 aa11.4□□□□□ -0.59
CIRBP-228ENST00000590347 P0DMU3 169 aa11.4□□□□□ -0.59
CIRBP-228ENST00000590347 FAM231AP0DMU4 169 aa11.4□□□□□ -0.59
CIRBP-228ENST00000590347 FAM231CP0DMU5 169 aa11.4□□□□□ -0.59
CIRBP-228ENST00000590347 KLRB1Q12918 225 aa11.4□□□□□ -0.59
CIRBP-228ENST00000590347 RHOHQ15669 191 aa11.4□□□□□ -0.59
CIRBP-228ENST00000590347 LINC00477Q96M19 166 aa11.4□□□□□ -0.59
CIRBP-228ENST00000590347 J3KT08 172 aa11.39□□□□□ -0.59
CIRBP-228ENST00000590347 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
CIRBP-228ENST00000590347 NBR2O15453 112 aa11.39□□□□□ -0.59
CIRBP-228ENST00000590347 CLEC19AQ6UXS0 136 aa11.39□□□□□ -0.59
CIRBP-228ENST00000590347 GPHB5Q86YW7 130 aa11.39□□□□□ -0.59
CIRBP-228ENST00000590347 I3L3M4 83 aa11.38□□□□□ -0.59
CIRBP-228ENST00000590347 EBI3Q14213 229 aa11.38□□□□□ -0.59
CIRBP-228ENST00000590347 ITPR1Q14643 2758 aa11.38□□□□□ -0.59
CIRBP-228ENST00000590347 TMEM223A0PJW6 202 aa11.38□□□□□ -0.59
CIRBP-228ENST00000590347 SPG11Q96JI7 2443 aa11.38□□□□□ -0.59
CIRBP-228ENST00000590347 A0A0J9YXY3 114 aa11.38□□□□□ -0.59
CIRBP-228ENST00000590347 K7ENP7 123 aa11.38□□□□□ -0.59
CIRBP-228ENST00000590347 RPL11P62913 178 aaKnown RBP11.38□□□□□ -0.59
CIRBP-228ENST00000590347 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
CIRBP-228ENST00000590347 RNF152Q8N8N0 203 aa11.38□□□□□ -0.59
CIRBP-228ENST00000590347 C16orf92Q96LL3 132 aa11.37□□□□□ -0.59
CIRBP-228ENST00000590347 DYNLRB1Q9NP97 96 aa11.37□□□□□ -0.59
CIRBP-228ENST00000590347 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
CIRBP-228ENST00000590347 CDSNQ15517 529 aa11.37□□□□□ -0.59
CIRBP-228ENST00000590347 C15orf32Q32M92 178 aa11.37□□□□□ -0.59
CIRBP-228ENST00000590347 ZNF625Q96I27 306 aaPredicted RBP11.37□□□□□ -0.59
CIRBP-228ENST00000590347 ZFYVE26Q68DK2 2539 aa11.36□□□□□ -0.59
CIRBP-228ENST00000590347 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
CIRBP-228ENST00000590347 BUB3O43684 328 aa11.36□□□□□ -0.59
CIRBP-228ENST00000590347 C20orf173Q96LM9 149 aa11.36□□□□□ -0.59
CIRBP-228ENST00000590347 TRBV7-7A0A0K0K1E9 115 aa11.35□□□□□ -0.59
CIRBP-228ENST00000590347 OXTP01178 125 aa11.35□□□□□ -0.59
CIRBP-228ENST00000590347 TRAV25A0A0B4J276 109 aa11.34□□□□□ -0.59
CIRBP-228ENST00000590347 UQCRQO14949 82 aa11.34□□□□□ -0.59
CIRBP-228ENST00000590347 NXPH4O95158 308 aa11.34□□□□□ -0.59
CIRBP-228ENST00000590347 SRSF2Q01130 221 aaKnown RBP11.34□□□□□ -0.59
CIRBP-228ENST00000590347 ZNF876PQ49A33 203 aa11.34□□□□□ -0.59
CIRBP-228ENST00000590347 SDIM1Q6ZPB5 146 aa11.34□□□□□ -0.59
CIRBP-228ENST00000590347 HRNRQ86YZ3 2850 aaPredicted RBP11.34□□□□□ -0.59
CIRBP-228ENST00000590347 TRBV30A0A0K0K1B3 111 aa11.34□□□□□ -0.59
CIRBP-228ENST00000590347 COX6CP09669 75 aa11.34□□□□□ -0.59
CIRBP-228ENST00000590347 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
CIRBP-228ENST00000590347 HIVEP3Q5T1R4 2406 aa11.34□□□□□ -0.59
CIRBP-228ENST00000590347 A0A087WVE0 104 aa11.33□□□□□ -0.6
CIRBP-228ENST00000590347 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.33□□□□□ -0.6
CIRBP-228ENST00000590347 IGKV3D-7A0A0C4DH55 119 aa11.33□□□□□ -0.6
CIRBP-228ENST00000590347 LY6DQ14210 128 aa11.33□□□□□ -0.6
CIRBP-228ENST00000590347 CSMD2Q7Z408 3487 aa11.33□□□□□ -0.6
CIRBP-228ENST00000590347 G3V318 75 aa11.33□□□□□ -0.6
CIRBP-228ENST00000590347 CACNA1AO00555 2505 aa11.32□□□□□ -0.6
CIRBP-228ENST00000590347 M0R1W7 72 aa11.32□□□□□ -0.6
CIRBP-228ENST00000590347 IGHV3-30-3P0DP02 117 aa11.32□□□□□ -0.6
CIRBP-228ENST00000590347 PKD1L2Q7Z442 2459 aa11.32□□□□□ -0.6
CIRBP-228ENST00000590347 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.32□□□□□ -0.6
CIRBP-228ENST00000590347 E7EQL1 145 aa11.32□□□□□ -0.6
CIRBP-228ENST00000590347 CCL21O00585 134 aa11.32□□□□□ -0.6
CIRBP-228ENST00000590347 VMO1Q7Z5L0 202 aa11.32□□□□□ -0.6
CIRBP-228ENST00000590347 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
CIRBP-228ENST00000590347 F5H768 121 aa11.31□□□□□ -0.6
CIRBP-228ENST00000590347 LEPROTO15243 131 aa11.31□□□□□ -0.6
CIRBP-228ENST00000590347 IGKV3-20P01619 116 aa11.31□□□□□ -0.6
CIRBP-228ENST00000590347 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
CIRBP-228ENST00000590347 PAPPA-AS1Q5QFB9 102 aa11.31□□□□□ -0.6
CIRBP-228ENST00000590347 ACACBO00763 2458 aa11.31□□□□□ -0.6
CIRBP-228ENST00000590347 LST1O00453 97 aa11.3□□□□□ -0.6
CIRBP-228ENST00000590347 RNASE3P12724 160 aaKnown RBP11.3□□□□□ -0.6
CIRBP-228ENST00000590347 IGHV3-73A0A0B4J1V6 119 aa11.3□□□□□ -0.6
CIRBP-228ENST00000590347 H3BT86 120 aa11.3□□□□□ -0.6
CIRBP-228ENST00000590347 OR13C6PQ8NH95 151 aa11.3□□□□□ -0.6
CIRBP-228ENST00000590347 IGHV4-4A0A075B6R2 117 aa11.29□□□□□ -0.6
CIRBP-228ENST00000590347 DAZ2Q13117 558 aaKnown RBP11.29□□□□□ -0.6
CIRBP-228ENST00000590347 DAZ4Q86SG3 579 aaKnown RBP11.29□□□□□ -0.6
CIRBP-228ENST00000590347 ZFAND2AQ8N6M9 145 aa11.29□□□□□ -0.6
CIRBP-228ENST00000590347 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
CIRBP-228ENST00000590347 Q9HAA7 133 aa11.29□□□□□ -0.6
CIRBP-228ENST00000590347 DAZ1Q9NQZ3 744 aaKnown RBP11.29□□□□□ -0.6
CIRBP-228ENST00000590347 DAZ3Q9NR90 486 aaKnown RBP11.29□□□□□ -0.6
CIRBP-228ENST00000590347 CENPEQ02224 2701 aa11.29□□□□□ -0.6
CIRBP-228ENST00000590347 ZFAND3Q9H8U3 227 aa11.29□□□□□ -0.6
CIRBP-228ENST00000590347 COX7CP15954 63 aa11.28□□□□□ -0.6
CIRBP-228ENST00000590347 C8orf31Q8N9H6 132 aa11.28□□□□□ -0.6
CIRBP-228ENST00000590347 C10orf105Q8TEF2 133 aa11.28□□□□□ -0.6
CIRBP-228ENST00000590347 NDUFA12Q9UI09 145 aa11.28□□□□□ -0.6
CIRBP-228ENST00000590347 LRRC75A-AS1Q8N1F1 130 aa11.28□□□□□ -0.6
CIRBP-228ENST00000590347 LITAFQ99732 161 aa11.28□□□□□ -0.6
CIRBP-228ENST00000590347 TIMM21Q9BVV7 248 aa11.28□□□□□ -0.6
CIRBP-228ENST00000590347 OVOL1O14753 267 aa11.27□□□□□ -0.6
CIRBP-228ENST00000590347 CRYBG3Q68DQ2 2970 aa11.27□□□□□ -0.61
CIRBP-228ENST00000590347 POLR2KP53803 58 aaKnown RBP11.27□□□□□ -0.61
CIRBP-228ENST00000590347 NUP37Q8NFH4 326 aa11.27□□□□□ -0.61
CIRBP-228ENST00000590347 CFAP46Q8IYW2 2715 aa11.27□□□□□ -0.61
CIRBP-228ENST00000590347 A0A1B0GX51 115 aa11.26□□□□□ -0.61
CIRBP-228ENST00000590347 VCYO14598 125 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms