RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 TRBV6-8A0A0A6YYG3 113 aa13.65□□□□□ -0.22
CIRBP-226ENST00000590171 SMIM17P0DL12 118 aa13.65□□□□□ -0.22
CIRBP-226ENST00000590171 CHCHD7Q9BUK0 85 aa13.65□□□□□ -0.22
CIRBP-226ENST00000590171 A0A087WX48 190 aa13.64□□□□□ -0.23
CIRBP-226ENST00000590171 P01737 135 aa13.64□□□□□ -0.23
CIRBP-226ENST00000590171 TAGLN2P37802 199 aaKnown RBP13.64□□□□□ -0.23
CIRBP-226ENST00000590171 ALKAL2Q6UX46 152 aa13.64□□□□□ -0.23
CIRBP-226ENST00000590171 NKX2-5P52952 324 aaPredicted RBP13.63□□□□□ -0.23
CIRBP-226ENST00000590171 XKRY2A2RUG3 117 aa13.62□□□□□ -0.23
CIRBP-226ENST00000590171 LECT2O14960 151 aa13.62□□□□□ -0.23
CIRBP-226ENST00000590171 CACNG7P62955 275 aa13.62□□□□□ -0.23
CIRBP-226ENST00000590171 UBE2WQ96B02 151 aa13.62□□□□□ -0.23
CIRBP-226ENST00000590171 BIN3Q9NQY0 253 aa13.62□□□□□ -0.23
CIRBP-226ENST00000590171 MGPP08493 103 aa13.61□□□□□ -0.23
CIRBP-226ENST00000590171 ELOBQ15370 118 aa13.61□□□□□ -0.23
CIRBP-226ENST00000590171 KCNIP4Q6PIL6 250 aa13.61□□□□□ -0.23
CIRBP-226ENST00000590171 NUDT10Q8NFP7 164 aa13.61□□□□□ -0.23
CIRBP-226ENST00000590171 RMI2Q96E14 147 aa13.61□□□□□ -0.23
CIRBP-226ENST00000590171 NUDT11Q96G61 164 aa13.61□□□□□ -0.23
CIRBP-226ENST00000590171 COX11Q9Y6N1 276 aa13.61□□□□□ -0.23
CIRBP-226ENST00000590171 IGKV2D-24A0A075B6R9 120 aa13.6□□□□□ -0.23
CIRBP-226ENST00000590171 TMEM262E9PQX1 116 aa13.6□□□□□ -0.23
CIRBP-226ENST00000590171 LYZL1Q6UWQ5 148 aa13.6□□□□□ -0.23
CIRBP-226ENST00000590171 NTM-AS1Q6ZSK4 140 aa13.6□□□□□ -0.23
CIRBP-226ENST00000590171 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.6□□□□□ -0.23
CIRBP-226ENST00000590171 BAALCQ8WXS3 180 aa13.6□□□□□ -0.23
CIRBP-226ENST00000590171 FAT1Q14517 4588 aa13.59□□□□□ -0.23
CIRBP-226ENST00000590171 EPM2AB3EWF7 344 aa13.59□□□□□ -0.23
CIRBP-226ENST00000590171 F2Z2F3 143 aa13.59□□□□□ -0.23
CIRBP-226ENST00000590171 K7EN84 100 aa13.59□□□□□ -0.23
CIRBP-226ENST00000590171 M0QY20 66 aa13.59□□□□□ -0.23
CIRBP-226ENST00000590171 BLOC1S1P78537 153 aa13.59□□□□□ -0.23
CIRBP-226ENST00000590171 HAMPP81172 84 aa13.59□□□□□ -0.23
CIRBP-226ENST00000590171 MPV17L2Q567V2 206 aa13.59□□□□□ -0.23
CIRBP-226ENST00000590171 SUMO4Q6EEV6 95 aa13.58□□□□□ -0.24
CIRBP-226ENST00000590171 ATRAIDQ6UW56 229 aa13.58□□□□□ -0.24
CIRBP-226ENST00000590171 OCC1Q8TAD7 63 aa13.58□□□□□ -0.24
CIRBP-226ENST00000590171 CHCHD5Q9BSY4 110 aa13.58□□□□□ -0.24
CIRBP-226ENST00000590171 TMEM70Q9BUB7 260 aa13.58□□□□□ -0.24
CIRBP-226ENST00000590171 RNASE7Q9H1E1 156 aaKnown RBP13.58□□□□□ -0.24
CIRBP-226ENST00000590171 CTRLP40313 264 aa13.57□□□□□ -0.24
CIRBP-226ENST00000590171 TMEM97Q5BJF2 176 aa13.57□□□□□ -0.24
CIRBP-226ENST00000590171 LYPD6BQ8NI32 183 aa13.57□□□□□ -0.24
CIRBP-226ENST00000590171 DNAH8Q96JB1 4490 aa13.57□□□□□ -0.24
CIRBP-226ENST00000590171 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.56□□□□□ -0.24
CIRBP-226ENST00000590171 H7C1H1 209 aa13.56□□□□□ -0.24
CIRBP-226ENST00000590171 TRGC1P0CF51 173 aa13.56□□□□□ -0.24
CIRBP-226ENST00000590171 NTF3P20783 257 aa13.56□□□□□ -0.24
CIRBP-226ENST00000590171 ENHOQ6UWT2 76 aa13.56□□□□□ -0.24
CIRBP-226ENST00000590171 C15orf54Q8N8G6 183 aa13.56□□□□□ -0.24
CIRBP-226ENST00000590171 RPP21Q9H633 154 aaKnown RBP13.56□□□□□ -0.24
CIRBP-226ENST00000590171 TMEM250H0YL14 139 aa13.55□□□□□ -0.24
CIRBP-226ENST00000590171 Q0VG73 95 aa13.55□□□□□ -0.24
CIRBP-226ENST00000590171 Q8N976 141 aa13.55□□□□□ -0.24
CIRBP-226ENST00000590171 DPH3P1Q9H4G8 78 aa13.55□□□□□ -0.24
CIRBP-226ENST00000590171 FAM30AQ9NZY2 134 aa13.55□□□□□ -0.24
CIRBP-226ENST00000590171 SMR3BP02814 79 aaPredicted RBP13.54□□□□□ -0.24
CIRBP-226ENST00000590171 ANGP03950 147 aaKnown RBP13.54□□□□□ -0.24
CIRBP-226ENST00000590171 Q5VSD8 79 aa13.54□□□□□ -0.24
CIRBP-226ENST00000590171 WDR73Q6P4I2 378 aa13.54□□□□□ -0.24
CIRBP-226ENST00000590171 CNFNQ9BYD5 112 aa13.54□□□□□ -0.24
CIRBP-226ENST00000590171 TRBV25-1A0A075B6N4 114 aa13.53□□□□□ -0.24
CIRBP-226ENST00000590171 CRPP02741 224 aa13.53□□□□□ -0.24
CIRBP-226ENST00000590171 PKIAP61925 76 aa13.53□□□□□ -0.24
CIRBP-226ENST00000590171 RASL11AQ6T310 242 aa13.53□□□□□ -0.24
CIRBP-226ENST00000590171 FRZBQ92765 325 aa13.53□□□□□ -0.24
CIRBP-226ENST00000590171 GAGE6Q13070 117 aa13.52□□□□□ -0.25
CIRBP-226ENST00000590171 IQCJQ1A5X6 159 aa13.52□□□□□ -0.25
CIRBP-226ENST00000590171 C1orf43Q9BWL3 253 aa13.52□□□□□ -0.25
CIRBP-226ENST00000590171 RBX1P62877 108 aa13.51□□□□□ -0.25
CIRBP-226ENST00000590171 TWIST1Q15672 202 aa13.51□□□□□ -0.25
CIRBP-226ENST00000590171 GTSF1Q8WW33 167 aa13.51□□□□□ -0.25
CIRBP-226ENST00000590171 IGHV1-24A0A0C4DH33 117 aa13.5□□□□□ -0.25
CIRBP-226ENST00000590171 CEBPGP53567 150 aa13.5□□□□□ -0.25
CIRBP-226ENST00000590171 NIT2Q9NQR4 276 aa13.5□□□□□ -0.25
CIRBP-226ENST00000590171 LINC01620Q4KN68 170 aa13.49□□□□□ -0.25
CIRBP-226ENST00000590171 Q6ZSA8 131 aa13.49□□□□□ -0.25
CIRBP-226ENST00000590171 PRR34Q9NV39 138 aa13.49□□□□□ -0.25
CIRBP-226ENST00000590171 GATCO43716 136 aaKnown RBP13.48□□□□□ -0.25
CIRBP-226ENST00000590171 MIAQ16674 131 aa13.48□□□□□ -0.25
CIRBP-226ENST00000590171 CLPSL2Q6UWE3 100 aa13.48□□□□□ -0.25
CIRBP-226ENST00000590171 FAM231DQ6ZW35 169 aa13.48□□□□□ -0.25
CIRBP-226ENST00000590171 LINC00269Q8N2A0 174 aa13.47□□□□□ -0.25
CIRBP-226ENST00000590171 DEFB104AQ8WTQ1 72 aa13.47□□□□□ -0.25
CIRBP-226ENST00000590171 FAM210AQ96ND0 272 aa13.47□□□□□ -0.25
CIRBP-226ENST00000590171 EIF5A2Q9GZV4 153 aaKnown RBP13.47□□□□□ -0.25
CIRBP-226ENST00000590171 TRAV26-2A0A0B4J265 109 aa13.46□□□□□ -0.25
CIRBP-226ENST00000590171 GATD1Q8NB37 220 aa13.46□□□□□ -0.25
CIRBP-226ENST00000590171 PGLYRP4Q96LB8 373 aa13.46□□□□□ -0.25
CIRBP-226ENST00000590171 HLA-DQA1P01909 254 aa13.45□□□□□ -0.26
CIRBP-226ENST00000590171 INAFM2P0DMQ5 153 aa13.45□□□□□ -0.26
CIRBP-226ENST00000590171 FOXA3P55318 350 aaPredicted RBP13.45□□□□□ -0.26
CIRBP-226ENST00000590171 SMIM7Q9BQ49 75 aa13.45□□□□□ -0.26
CIRBP-226ENST00000590171 TMEM243Q9BU79 118 aa13.45□□□□□ -0.26
CIRBP-226ENST00000590171 A8MWL6 223 aa13.44□□□□□ -0.26
CIRBP-226ENST00000590171 NDUFS6O75380 124 aaKnown RBP13.44□□□□□ -0.26
CIRBP-226ENST00000590171 KRTAP26-1Q6PEX3 210 aa13.44□□□□□ -0.26
CIRBP-226ENST00000590171 C20orf203Q8NBC4 194 aa13.44□□□□□ -0.26
CIRBP-226ENST00000590171 VPS13BQ7Z7G8 4022 aa13.44□□□□□ -0.26
CIRBP-226ENST00000590171 FAM229AH3BQW9 127 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms