RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
APBA3-205ENST00000590064 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
APBA3-205ENST00000590064 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
APBA3-205ENST00000590064 UBE2D1P51668 147 aa12.22□□□□□ -0.45
APBA3-205ENST00000590064 IGHV3-53P01767 116 aa12.22□□□□□ -0.45
APBA3-205ENST00000590064 MED14OSP0DP75 135 aa12.22□□□□□ -0.45
APBA3-205ENST00000590064 CEMP1Q6PRD7 247 aaPredicted RBP12.22□□□□□ -0.45
APBA3-205ENST00000590064 CLPSL1A2RUU4 121 aa12.21□□□□□ -0.46
APBA3-205ENST00000590064 IGHV3-30-3P0DP02 117 aa12.21□□□□□ -0.46
APBA3-205ENST00000590064 SIRPDQ9H106 197 aa12.21□□□□□ -0.46
APBA3-205ENST00000590064 ZNF415Q09FC8 603 aa12.2□□□□□ -0.46
APBA3-205ENST00000590064 EDA2RQ9HAV5 297 aa12.2□□□□□ -0.46
APBA3-205ENST00000590064 TRAV4A0A0B4J268 109 aa12.2□□□□□ -0.46
APBA3-205ENST00000590064 C20orf203Q8NBC4 194 aa12.2□□□□□ -0.46
APBA3-205ENST00000590064 IGHV4-4A0A075B6R2 117 aa12.2□□□□□ -0.46
APBA3-205ENST00000590064 RS1O15537 224 aa12.2□□□□□ -0.46
APBA3-205ENST00000590064 NCOR2Q9Y618 2525 aa12.19□□□□□ -0.46
APBA3-205ENST00000590064 RNASE3P12724 160 aaKnown RBP12.19□□□□□ -0.46
APBA3-205ENST00000590064 A0A0J9YXY3 114 aa12.19□□□□□ -0.46
APBA3-205ENST00000590064 CRPP02741 224 aa12.19□□□□□ -0.46
APBA3-205ENST00000590064 LINC00158P58513 81 aa12.19□□□□□ -0.46
APBA3-205ENST00000590064 CDIP1Q9H305 208 aa12.19□□□□□ -0.46
APBA3-205ENST00000590064 K7ENP7 123 aa12.18□□□□□ -0.46
APBA3-205ENST00000590064 LY6DQ14210 128 aa12.18□□□□□ -0.46
APBA3-205ENST00000590064 EBI3Q14213 229 aa12.18□□□□□ -0.46
APBA3-205ENST00000590064 ZNF22P17026 224 aaPredicted RBP12.18□□□□□ -0.46
APBA3-205ENST00000590064 Q8N6K4 173 aa12.18□□□□□ -0.46
APBA3-205ENST00000590064 ZNRF2Q8NHG8 242 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 TRGV1A0A0A0MS02 117 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 CRIP2P52943 208 aaPredicted RBP12.17□□□□□ -0.46
APBA3-205ENST00000590064 IGF2-ASQ6U949 168 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 PRO0461Q9UI25 63 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 A0A0B4J2C4 111 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 FAM236AA0A1B0GUQ0 79 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 FAM236BA0A1B0GV22 79 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 UBE2D3P61077 147 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 UBE2D2P62837 147 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 PSMG3-AS1Q96PY0 264 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 Q9H8V8 135 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 TRIAP1O43715 76 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 TSPEAR-AS2P59090 65 aa12.17□□□□□ -0.46
APBA3-205ENST00000590064 USP9YO00507 2555 aaPredicted RBP12.16□□□□□ -0.46
APBA3-205ENST00000590064 SMCPP49901 116 aaPredicted RBP12.16□□□□□ -0.46
APBA3-205ENST00000590064 UBE2E2Q96LR5 201 aa12.16□□□□□ -0.46
APBA3-205ENST00000590064 PRO3102Q9H379 93 aa12.16□□□□□ -0.46
APBA3-205ENST00000590064 SETD2Q9BYW2 2564 aaPredicted RBP12.16□□□□□ -0.46
APBA3-205ENST00000590064 P0DMU3 169 aa12.15□□□□□ -0.46
APBA3-205ENST00000590064 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
APBA3-205ENST00000590064 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
APBA3-205ENST00000590064 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
APBA3-205ENST00000590064 TRGV2A0A075B6R0 118 aa12.15□□□□□ -0.46
APBA3-205ENST00000590064 RPL36AP83881 106 aaKnown RBP12.14□□□□□ -0.47
APBA3-205ENST00000590064 RPL36ALQ969Q0 106 aaKnown RBP12.14□□□□□ -0.47
APBA3-205ENST00000590064 TMEM223A0PJW6 202 aa12.14□□□□□ -0.47
APBA3-205ENST00000590064 H3BT86 120 aa12.14□□□□□ -0.47
APBA3-205ENST00000590064 IGHV4-38-2P0DP08 117 aa12.14□□□□□ -0.47
APBA3-205ENST00000590064 HERV-K104P63124 156 aa12.14□□□□□ -0.47
APBA3-205ENST00000590064 POLR2KP53803 58 aaKnown RBP12.14□□□□□ -0.47
APBA3-205ENST00000590064 C11orf68Q9H3H3 251 aaKnown RBP12.14□□□□□ -0.47
APBA3-205ENST00000590064 FREM2Q5SZK8 3169 aa12.14□□□□□ -0.47
APBA3-205ENST00000590064 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
APBA3-205ENST00000590064 TLN2Q9Y4G6 2542 aa12.14□□□□□ -0.47
APBA3-205ENST00000590064 IGIPA6NJ69 53 aa12.13□□□□□ -0.47
APBA3-205ENST00000590064 IGLV4-69A0A075B6H9 119 aa12.13□□□□□ -0.47
APBA3-205ENST00000590064 PAX4O43316 350 aa12.13□□□□□ -0.47
APBA3-205ENST00000590064 GATA3P23771 443 aa12.13□□□□□ -0.47
APBA3-205ENST00000590064 LGALS9O00182 355 aa12.13□□□□□ -0.47
APBA3-205ENST00000590064 C11orf44Q8N8P7 122 aa12.12□□□□□ -0.47
APBA3-205ENST00000590064 XCL2Q9UBD3 114 aa12.12□□□□□ -0.47
APBA3-205ENST00000590064 USP9XQ93008 2570 aaPredicted RBP12.12□□□□□ -0.47
APBA3-205ENST00000590064 HIST1H4AP62805 103 aaKnown RBP12.12□□□□□ -0.47
APBA3-205ENST00000590064 CHCHD5Q9BSY4 110 aa12.12□□□□□ -0.47
APBA3-205ENST00000590064 IGLV4-3A0A075B6K6 122 aa12.12□□□□□ -0.47
APBA3-205ENST00000590064 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
APBA3-205ENST00000590064 A8MZ25 164 aa12.12□□□□□ -0.47
APBA3-205ENST00000590064 BAALC-AS2P0C853 105 aa12.12□□□□□ -0.47
APBA3-205ENST00000590064 STHQ8IWL8 128 aa12.11□□□□□ -0.47
APBA3-205ENST00000590064 INAFM2P0DMQ5 153 aa12.11□□□□□ -0.47
APBA3-205ENST00000590064 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
APBA3-205ENST00000590064 TRBV27A0A0K0K1C4 114 aa12.11□□□□□ -0.47
APBA3-205ENST00000590064 LINC01546A6NGU7 62 aa12.11□□□□□ -0.47
APBA3-205ENST00000590064 ADORA2A-AS1P86434 159 aa12.11□□□□□ -0.47
APBA3-205ENST00000590064 IGHV4OR15-8A0A075B7B6 117 aa12.11□□□□□ -0.47
APBA3-205ENST00000590064 A0A087WW49 117 aa12.11□□□□□ -0.47
APBA3-205ENST00000590064 HOXD3P31249 432 aaPredicted RBP12.11□□□□□ -0.47
APBA3-205ENST00000590064 PRRC2AP48634 2157 aaKnown RBP12.1□□□□□ -0.47
APBA3-205ENST00000590064 GPHB5Q86YW7 130 aa12.1□□□□□ -0.47
APBA3-205ENST00000590064 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
APBA3-205ENST00000590064 M0QY20 66 aa12.1□□□□□ -0.47
APBA3-205ENST00000590064 H3BUA1 57 aa12.1□□□□□ -0.47
APBA3-205ENST00000590064 RBMY1BA6NDE4 496 aaKnown RBP12.09□□□□□ -0.47
APBA3-205ENST00000590064 RBMY1EA6NEQ0 496 aaKnown RBP12.09□□□□□ -0.47
APBA3-205ENST00000590064 RBMY1DP0C7P1 496 aaKnown RBP12.09□□□□□ -0.47
APBA3-205ENST00000590064 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
APBA3-205ENST00000590064 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
APBA3-205ENST00000590064 PEMTQ9UBM1 199 aa12.09□□□□□ -0.47
APBA3-205ENST00000590064 MGAQ8IWI9 3026 aa12.09□□□□□ -0.47
APBA3-205ENST00000590064 MSMBP08118 114 aa12.09□□□□□ -0.47
APBA3-205ENST00000590064 TMEM263Q8WUH6 116 aaKnown RBP12.09□□□□□ -0.47
APBA3-205ENST00000590064 IGHV4-61A0A0C4DH41 118 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms