RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 K7EP13 123 aa14.05□□□□□ -0.16
PRKCSH-209ENST00000589838 SCGB2A2Q13296 93 aa14.05□□□□□ -0.16
PRKCSH-209ENST00000589838 CSMD2Q7Z408 3487 aa14.04□□□□□ -0.16
PRKCSH-209ENST00000589838 H3BUT2 72 aa14.04□□□□□ -0.16
PRKCSH-209ENST00000589838 INSP01308 110 aa14.04□□□□□ -0.16
PRKCSH-209ENST00000589838 FHL3Q13643 280 aa14.04□□□□□ -0.16
PRKCSH-209ENST00000589838 LINC01587Q99440 93 aa14.04□□□□□ -0.16
PRKCSH-209ENST00000589838 SPXQ9BT56 116 aa14.04□□□□□ -0.16
PRKCSH-209ENST00000589838 FOSL1P15407 271 aa14.04□□□□□ -0.16
PRKCSH-209ENST00000589838 FXYD2P54710 66 aa14.04□□□□□ -0.16
PRKCSH-209ENST00000589838 PRADC1Q9BSG0 188 aa14.04□□□□□ -0.16
PRKCSH-209ENST00000589838 CCL24O00175 119 aa14.03□□□□□ -0.16
PRKCSH-209ENST00000589838 RAB37Q96AX2 223 aa14.03□□□□□ -0.16
PRKCSH-209ENST00000589838 HIST1H4GQ99525 98 aa14.03□□□□□ -0.16
PRKCSH-209ENST00000589838 ESM1Q9NQ30 184 aa14.03□□□□□ -0.16
PRKCSH-209ENST00000589838 YAE1D1Q9NRH1 226 aa14.03□□□□□ -0.16
PRKCSH-209ENST00000589838 IGLV4-69A0A075B6H9 119 aa14.02□□□□□ -0.16
PRKCSH-209ENST00000589838 J3QKU1 62 aa14.02□□□□□ -0.16
PRKCSH-209ENST00000589838 C20orf203Q8NBC4 194 aa14.02□□□□□ -0.16
PRKCSH-209ENST00000589838 C11orf86A6NJI1 115 aa14.01□□□□□ -0.17
PRKCSH-209ENST00000589838 C16orf95Q9H693 158 aa14.01□□□□□ -0.17
PRKCSH-209ENST00000589838 TSSC4Q9Y5U2 329 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-209ENST00000589838 APCP25054 2843 aa14.01□□□□□ -0.17
PRKCSH-209ENST00000589838 RHODO00212 210 aa14.01□□□□□ -0.17
PRKCSH-209ENST00000589838 DEFB104AQ8WTQ1 72 aa14.01□□□□□ -0.17
PRKCSH-209ENST00000589838 RNASE1P07998 156 aaKnown RBP14□□□□□ -0.17
PRKCSH-209ENST00000589838 CD28P10747 220 aa14□□□□□ -0.17
PRKCSH-209ENST00000589838 TNFRSF18Q9Y5U5 241 aa14□□□□□ -0.17
PRKCSH-209ENST00000589838 A0A1W2PPM0 123 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 A0A1W2PRX2 142 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 PLA2G2AP14555 144 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 CMC4P56277 68 aaPredicted RBP13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 HIST2H2BCQ6DN03 193 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 UFSP1Q6NVU6 142 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 STHQ8IWL8 128 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 ZNF815PA8K554 130 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 K7EP34 96 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 P0DMU3 169 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 FAM231AP0DMU4 169 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 FAM231CP0DMU5 169 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 KRTAP1-1Q07627 177 aa13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 NHP2Q9NX24 153 aaKnown RBP13.99□□□□□ -0.17
PRKCSH-209ENST00000589838 KMT2BQ9UMN6 2715 aaPredicted RBP13.98□□□□□ -0.17
PRKCSH-209ENST00000589838 FABP2P12104 132 aa13.98□□□□□ -0.17
PRKCSH-209ENST00000589838 SAMD5Q5TGI4 173 aa13.98□□□□□ -0.17
PRKCSH-209ENST00000589838 TRBV7-3A0A075B6L6 115 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 BEAN1Q3B7T3 259 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 ODF3L2Q3SX64 289 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 NFE4Q86UQ8 179 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 C11orf44Q8N8P7 122 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 C11orf72Q8NBR9 251 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 IGHV3-73A0A0B4J1V6 119 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 CFAP126Q5VTH2 177 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 OR5A1Q8NGJ0 315 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 DNAJC30Q96LL9 226 aa13.97□□□□□ -0.17
PRKCSH-209ENST00000589838 TMEM170BQ5T4T1 132 aa13.96□□□□□ -0.17
PRKCSH-209ENST00000589838 SCGB1D4Q6XE38 83 aa13.96□□□□□ -0.17
PRKCSH-209ENST00000589838 LINC01006Q8NI28 216 aa13.96□□□□□ -0.17
PRKCSH-209ENST00000589838 CITED2Q99967 270 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-209ENST00000589838 PYGO1Q9Y3Y4 419 aa13.96□□□□□ -0.17
PRKCSH-209ENST00000589838 ITPR3Q14573 2671 aa13.96□□□□□ -0.18
PRKCSH-209ENST00000589838 GAGE12BA1L429 117 aa13.95□□□□□ -0.18
PRKCSH-209ENST00000589838 HIST2H2BDQ6DRA6 164 aa13.95□□□□□ -0.18
PRKCSH-209ENST00000589838 PHLDA1Q8WV24 401 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-209ENST00000589838 VCX2Q9H322 139 aa13.95□□□□□ -0.18
PRKCSH-209ENST00000589838 CRYBA4P53673 196 aa13.95□□□□□ -0.18
PRKCSH-209ENST00000589838 EMP1P54849 157 aa13.95□□□□□ -0.18
PRKCSH-209ENST00000589838 ZNF418Q8TF45 676 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-209ENST00000589838 NAA38Q9BRA0 125 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-209ENST00000589838 SPCS1Q9Y6A9 102 aa13.95□□□□□ -0.18
PRKCSH-209ENST00000589838 RS1O15537 224 aa13.94□□□□□ -0.18
PRKCSH-209ENST00000589838 C12orf74Q32Q52 190 aa13.94□□□□□ -0.18
PRKCSH-209ENST00000589838 IGHV3-53P01767 116 aa13.93□□□□□ -0.18
PRKCSH-209ENST00000589838 PRM2P04554 102 aa13.93□□□□□ -0.18
PRKCSH-209ENST00000589838 PROK1P58294 105 aa13.93□□□□□ -0.18
PRKCSH-209ENST00000589838 ZNRF2Q8NHG8 242 aa13.93□□□□□ -0.18
PRKCSH-209ENST00000589838 XCL2Q9UBD3 114 aa13.93□□□□□ -0.18
PRKCSH-209ENST00000589838 TMEM238LA0A1B0GVL6 79 aa13.93□□□□□ -0.18
PRKCSH-209ENST00000589838 A6NJY4 79 aa13.93□□□□□ -0.18
PRKCSH-209ENST00000589838 IGLV4-3A0A075B6K6 122 aa13.92□□□□□ -0.18
PRKCSH-209ENST00000589838 K7ERJ3 54 aa13.92□□□□□ -0.18
PRKCSH-209ENST00000589838 MYO9AB2RTY4 2548 aa13.91□□□□□ -0.18
PRKCSH-209ENST00000589838 SRSF9Q13242 221 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRKCSH-209ENST00000589838 RNASE8Q8TDE3 154 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-209ENST00000589838 OPRPNQ99935 248 aaPredicted RBP13.91□□□□□ -0.18
PRKCSH-209ENST00000589838 MRPL16Q9NX20 251 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-209ENST00000589838 CBY1Q9Y3M2 126 aa13.91□□□□□ -0.18
PRKCSH-209ENST00000589838 CHD6Q8TD26 2715 aa13.91□□□□□ -0.18
PRKCSH-209ENST00000589838 NACAE9PAV3 2078 aa13.91□□□□□ -0.18
PRKCSH-209ENST00000589838 A0A1B0GWB2 263 aa13.91□□□□□ -0.18
PRKCSH-209ENST00000589838 IGLL5B9A064 214 aa13.9□□□□□ -0.18
PRKCSH-209ENST00000589838 LGALS3P17931 250 aaKnown RBP13.9□□□□□ -0.18
PRKCSH-209ENST00000589838 J3QQQ9 107 aa13.89□□□□□ -0.19
PRKCSH-209ENST00000589838 LEPROTO15243 131 aa13.89□□□□□ -0.19
PRKCSH-209ENST00000589838 C1orf158Q8N1D5 194 aa13.89□□□□□ -0.19
PRKCSH-209ENST00000589838 SPANXA1Q9NS26 97 aa13.89□□□□□ -0.19
PRKCSH-209ENST00000589838 TMEM223A0PJW6 202 aa13.89□□□□□ -0.19
PRKCSH-209ENST00000589838 Q6ZSN1 163 aa13.89□□□□□ -0.19
PRKCSH-209ENST00000589838 PLEKHB2Q96CS7 222 aa13.89□□□□□ -0.19
PRKCSH-209ENST00000589838 FAM110AQ9BQ89 295 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms