RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 MUC4Q99102 2169 aa11□□□□□ -0.65
RETREG3-208ENST00000589797 DNAJC9-AS1A6NH13 148 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 RPL13AP40429 203 aaKnown RBP10.99□□□□□ -0.65
RETREG3-208ENST00000589797 UBE2V1Q13404 147 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 IGLC6P0CF74 106 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 LINC01545Q5VT33 79 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 ZFAND2AQ8N6M9 145 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 A0A0J9YX75 114 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 DEFB4AO15263 64 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 COX6CP09669 75 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 PMVKQ15126 192 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 AMTNQ6UX39 209 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 I3L3M4 83 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 PAX2Q02962 417 aa10.99□□□□□ -0.65
RETREG3-208ENST00000589797 CEMP1Q6PRD7 247 aaPredicted RBP10.99□□□□□ -0.65
RETREG3-208ENST00000589797 K7EP13 123 aa10.98□□□□□ -0.65
RETREG3-208ENST00000589797 MRPS12O15235 138 aaKnown RBP10.98□□□□□ -0.65
RETREG3-208ENST00000589797 HLA-DRB4P13762 266 aa10.98□□□□□ -0.65
RETREG3-208ENST00000589797 PGPEP1Q9NXJ5 209 aa10.98□□□□□ -0.65
RETREG3-208ENST00000589797 HLA-DRB4X5D2U9 266 aa10.98□□□□□ -0.65
RETREG3-208ENST00000589797 H3BRM9 83 aa10.97□□□□□ -0.65
RETREG3-208ENST00000589797 K7EMT4 169 aa10.97□□□□□ -0.65
RETREG3-208ENST00000589797 Q6YL49 198 aa10.97□□□□□ -0.65
RETREG3-208ENST00000589797 SPATA12Q7Z6I5 190 aa10.97□□□□□ -0.65
RETREG3-208ENST00000589797 OR5A1Q8NGJ0 315 aa10.97□□□□□ -0.65
RETREG3-208ENST00000589797 CLPSL2Q6UWE3 100 aa10.96□□□□□ -0.65
RETREG3-208ENST00000589797 A0A087WX48 190 aa10.96□□□□□ -0.65
RETREG3-208ENST00000589797 A0A0J9YXV3 536 aa10.96□□□□□ -0.66
RETREG3-208ENST00000589797 A8MWV9 139 aa10.96□□□□□ -0.66
RETREG3-208ENST00000589797 GAGE6Q13070 117 aa10.96□□□□□ -0.66
RETREG3-208ENST00000589797 C20orf78Q9BR46 151 aa10.96□□□□□ -0.66
RETREG3-208ENST00000589797 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 TSSC4Q9Y5U2 329 aaPredicted RBP10.95□□□□□ -0.66
RETREG3-208ENST00000589797 TRBV25-1A0A075B6N4 114 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 PSMB8P28062 276 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 PROK1P58294 105 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 TEX15Q9BXT5 2789 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 TRBV6-1A0A0K0K1D8 114 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 SMAGPQ0VAQ4 97 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 ZFP2Q6ZN57 461 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 ZNF493Q6ZR52 646 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 Q6ZSV7 163 aa10.95□□□□□ -0.66
RETREG3-208ENST00000589797 M0R2P5 195 aa10.94□□□□□ -0.66
RETREG3-208ENST00000589797 URB1-AS1Q96HZ7 61 aa10.94□□□□□ -0.66
RETREG3-208ENST00000589797 A0A1B0GV72 72 aa10.94□□□□□ -0.66
RETREG3-208ENST00000589797 A0A0J9YY99 117 aa10.94□□□□□ -0.66
RETREG3-208ENST00000589797 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
RETREG3-208ENST00000589797 WFDC10AQ9H1F0 79 aa10.93□□□□□ -0.66
RETREG3-208ENST00000589797 K7EQG2 157 aa10.93□□□□□ -0.66
RETREG3-208ENST00000589797 DEFB121Q5J5C9 76 aa10.93□□□□□ -0.66
RETREG3-208ENST00000589797 RASL10AQ92737 203 aa10.93□□□□□ -0.66
RETREG3-208ENST00000589797 RNF185Q96GF1 192 aa10.93□□□□□ -0.66
RETREG3-208ENST00000589797 C1QTNF4Q9BXJ3 329 aa10.93□□□□□ -0.66
RETREG3-208ENST00000589797 SPINK8P0C7L1 97 aa10.93□□□□□ -0.66
RETREG3-208ENST00000589797 LINC00158P58513 81 aa10.93□□□□□ -0.66
RETREG3-208ENST00000589797 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
RETREG3-208ENST00000589797 ODF1Q14990 250 aa10.92□□□□□ -0.66
RETREG3-208ENST00000589797 CRYBG3Q68DQ2 2970 aa10.92□□□□□ -0.66
RETREG3-208ENST00000589797 PRIMA1Q86XR5 153 aa10.92□□□□□ -0.66
RETREG3-208ENST00000589797 MYMXA0A1B0GTQ4 84 aa10.92□□□□□ -0.66
RETREG3-208ENST00000589797 C3orf56Q8N813 242 aa10.92□□□□□ -0.66
RETREG3-208ENST00000589797 SCRT2Q9NQ03 307 aa10.92□□□□□ -0.66
RETREG3-208ENST00000589797 ZANQ9Y493 2812 aa10.92□□□□□ -0.66
RETREG3-208ENST00000589797 F5H768 121 aa10.91□□□□□ -0.66
RETREG3-208ENST00000589797 FXYD2P54710 66 aa10.91□□□□□ -0.66
RETREG3-208ENST00000589797 ZNF702PQ9H963 129 aa10.91□□□□□ -0.66
RETREG3-208ENST00000589797 GCN1Q92616 2671 aaKnown RBP10.91□□□□□ -0.66
RETREG3-208ENST00000589797 CCL25O15444 150 aa10.91□□□□□ -0.66
RETREG3-208ENST00000589797 RHODO00212 210 aa10.9□□□□□ -0.66
RETREG3-208ENST00000589797 J3QQQ9 107 aa10.9□□□□□ -0.66
RETREG3-208ENST00000589797 MAP6D1Q9H9H5 199 aa10.9□□□□□ -0.66
RETREG3-208ENST00000589797 ERG28Q9UKR5 140 aa10.9□□□□□ -0.66
RETREG3-208ENST00000589797 IGKV2D-26A0A0A0MRZ7 120 aa10.9□□□□□ -0.67
RETREG3-208ENST00000589797 H3BMG7 143 aa10.89□□□□□ -0.67
RETREG3-208ENST00000589797 TRBV7-9A0A0J9YWB2 115 aa10.89□□□□□ -0.67
RETREG3-208ENST00000589797 INAFM1C9JVW0 142 aa10.89□□□□□ -0.67
RETREG3-208ENST00000589797 IGLV1-40P01703 118 aa10.89□□□□□ -0.67
RETREG3-208ENST00000589797 ETDBQ3ZM63 59 aa10.89□□□□□ -0.67
RETREG3-208ENST00000589797 MALP21145 153 aa10.89□□□□□ -0.67
RETREG3-208ENST00000589797 PFN2P35080 140 aa10.89□□□□□ -0.67
RETREG3-208ENST00000589797 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
RETREG3-208ENST00000589797 H3BMM0 161 aa10.88□□□□□ -0.67
RETREG3-208ENST00000589797 RNASE3P12724 160 aaKnown RBP10.88□□□□□ -0.67
RETREG3-208ENST00000589797 DEFB125Q8N687 156 aa10.88□□□□□ -0.67
RETREG3-208ENST00000589797 BAALCQ8WXS3 180 aa10.88□□□□□ -0.67
RETREG3-208ENST00000589797 NDUFA12Q9UI09 145 aa10.88□□□□□ -0.67
RETREG3-208ENST00000589797 DEFB114Q30KQ6 69 aa10.87□□□□□ -0.67
RETREG3-208ENST00000589797 C6orf226Q5I0X4 101 aa10.87□□□□□ -0.67
RETREG3-208ENST00000589797 PLEKHB2Q96CS7 222 aa10.87□□□□□ -0.67
RETREG3-208ENST00000589797 DAND5Q8N907 189 aa10.87□□□□□ -0.67
RETREG3-208ENST00000589797 TMEM141Q96I45 108 aa10.87□□□□□ -0.67
RETREG3-208ENST00000589797 TMEM238C9JI98 176 aa10.87□□□□□ -0.67
RETREG3-208ENST00000589797 DCANP1Q8TF63 244 aa10.87□□□□□ -0.67
RETREG3-208ENST00000589797 UBR5O95071 2799 aaPredicted RBP10.87□□□□□ -0.67
RETREG3-208ENST00000589797 Q6ZTI0 123 aa10.86□□□□□ -0.67
RETREG3-208ENST00000589797 C4orf3Q8WVX3 66 aa10.86□□□□□ -0.67
RETREG3-208ENST00000589797 C9orf118A6NHY6 69 aa10.86□□□□□ -0.67
RETREG3-208ENST00000589797 CMC4P56277 68 aaPredicted RBP10.86□□□□□ -0.67
RETREG3-208ENST00000589797 CEND1Q8N111 149 aa10.86□□□□□ -0.67
RETREG3-208ENST00000589797 TRAV8-3A0A0A6YYJ7 113 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms