RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 PRELID3AQ96N28 172 aa14.9□□□□□ -0.02
R3HDM4-204ENST00000589428 APLNQ9ULZ1 77 aa14.9□□□□□ -0.02
R3HDM4-204ENST00000589428 HOXA5P20719 270 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 NRACQ8N912 160 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 RPL39LQ96EH5 51 aaKnown RBP14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 TRGV4A0A0C4DH28 118 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST1H2BKO60814 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 NPYP01303 97 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST1H2BJP06899 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST1H2BOP23527 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST1H2BBP33778 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST1H2BDP58876 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST1H2BCP62807 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST2H2BEQ16778 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST1H2BHQ93079 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST1H2BNQ99877 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 HIST1H2BMQ99879 126 aa14.89□□□□□ -0.03
R3HDM4-204ENST00000589428 P0DMU3 169 aa14.88□□□□□ -0.03
R3HDM4-204ENST00000589428 FAM231AP0DMU4 169 aa14.88□□□□□ -0.03
R3HDM4-204ENST00000589428 FAM231CP0DMU5 169 aa14.88□□□□□ -0.03
R3HDM4-204ENST00000589428 SLC25A29Q8N8R3 303 aa14.87□□□□□ -0.03
R3HDM4-204ENST00000589428 C15orf53Q8NAA6 179 aa14.87□□□□□ -0.03
R3HDM4-204ENST00000589428 Q9UF83 564 aa14.87□□□□□ -0.03
R3HDM4-204ENST00000589428 ALMS1Q8TCU4 4167 aa14.87□□□□□ -0.03
R3HDM4-204ENST00000589428 KMT2CQ8NEZ4 4911 aaKnown RBP14.87□□□□□ -0.03
R3HDM4-204ENST00000589428 LCE6AA0A183 80 aa14.86□□□□□ -0.03
R3HDM4-204ENST00000589428 TNFRSF6BO95407 300 aa14.86□□□□□ -0.03
R3HDM4-204ENST00000589428 TRAV26-1A0A087WT03 109 aa14.86□□□□□ -0.03
R3HDM4-204ENST00000589428 H7C1H1 209 aa14.86□□□□□ -0.03
R3HDM4-204ENST00000589428 K7EQD1 137 aa14.86□□□□□ -0.03
R3HDM4-204ENST00000589428 LYSTQ99698 3801 aa14.86□□□□□ -0.03
R3HDM4-204ENST00000589428 LAMTOR2Q9Y2Q5 125 aa14.86□□□□□ -0.03
R3HDM4-204ENST00000589428 RAB5BP61020 215 aa14.85□□□□□ -0.03
R3HDM4-204ENST00000589428 OR10J3Q5JRS4 329 aa14.85□□□□□ -0.03
R3HDM4-204ENST00000589428 C18orf32Q8TCD1 76 aa14.85□□□□□ -0.03
R3HDM4-204ENST00000589428 LINC00476Q8WZB0 136 aa14.85□□□□□ -0.03
R3HDM4-204ENST00000589428 TRBV6-4A0A1B0GX49 114 aa14.84□□□□□ -0.03
R3HDM4-204ENST00000589428 A0A0J9YY99 117 aa14.83□□□□□ -0.03
R3HDM4-204ENST00000589428 IQCJQ1A5X6 159 aa14.83□□□□□ -0.03
R3HDM4-204ENST00000589428 NIT2Q9NQR4 276 aa14.83□□□□□ -0.03
R3HDM4-204ENST00000589428 HHLA3Q9XRX5 114 aa14.83□□□□□ -0.03
R3HDM4-204ENST00000589428 LY6G6CO95867 125 aa14.83□□□□□ -0.04
R3HDM4-204ENST00000589428 NUDT3O95989 172 aa14.83□□□□□ -0.04
R3HDM4-204ENST00000589428 PPP1R17O96001 155 aa14.83□□□□□ -0.04
R3HDM4-204ENST00000589428 NEXN-AS1Q8NBZ9 246 aa14.83□□□□□ -0.04
R3HDM4-204ENST00000589428 SACSQ9NZJ4 4579 aa14.82□□□□□ -0.04
R3HDM4-204ENST00000589428 CRYBA4P53673 196 aa14.82□□□□□ -0.04
R3HDM4-204ENST00000589428 LGALS9CQ6DKI2 356 aa14.82□□□□□ -0.04
R3HDM4-204ENST00000589428 PRO0255Q9UI72 69 aa14.82□□□□□ -0.04
R3HDM4-204ENST00000589428 TRBV6-5A0A0K0K1A5 114 aa14.81□□□□□ -0.04
R3HDM4-204ENST00000589428 RHOHQ15669 191 aa14.81□□□□□ -0.04
R3HDM4-204ENST00000589428 DNAH1Q9P2D7 4330 aa14.81□□□□□ -0.04
R3HDM4-204ENST00000589428 TRBV10-1A0A0K0K1A3 114 aa14.8□□□□□ -0.04
R3HDM4-204ENST00000589428 LOC100131303A0A0U1RQF7 123 aa14.8□□□□□ -0.04
R3HDM4-204ENST00000589428 H3BNG1 76 aa14.8□□□□□ -0.04
R3HDM4-204ENST00000589428 SUMO2P61956 95 aaKnown RBP14.8□□□□□ -0.04
R3HDM4-204ENST00000589428 C20orf78Q9BR46 151 aa14.8□□□□□ -0.04
R3HDM4-204ENST00000589428 MAP1LC3AQ9H492 121 aa14.8□□□□□ -0.04
R3HDM4-204ENST00000589428 LOC389332A0A1B0GUA5 103 aa14.8□□□□□ -0.04
R3HDM4-204ENST00000589428 Q0VG73 95 aa14.8□□□□□ -0.04
R3HDM4-204ENST00000589428 ST20Q9HBF5 79 aa14.8□□□□□ -0.04
R3HDM4-204ENST00000589428 PAX4O43316 350 aa14.79□□□□□ -0.04
R3HDM4-204ENST00000589428 VSIG2Q96IQ7 327 aa14.79□□□□□ -0.04
R3HDM4-204ENST00000589428 SDHAF1A6NFY7 115 aa14.78□□□□□ -0.04
R3HDM4-204ENST00000589428 DNAJC30Q96LL9 226 aa14.78□□□□□ -0.04
R3HDM4-204ENST00000589428 PRADC1Q9BSG0 188 aa14.78□□□□□ -0.04
R3HDM4-204ENST00000589428 TMEM70Q9BUB7 260 aa14.78□□□□□ -0.04
R3HDM4-204ENST00000589428 TNFRSF18Q9Y5U5 241 aa14.78□□□□□ -0.04
R3HDM4-204ENST00000589428 PRSS47A8MTI9 375 aa14.78□□□□□ -0.04
R3HDM4-204ENST00000589428 SMIM2Q9BVW6 85 aa14.78□□□□□ -0.04
R3HDM4-204ENST00000589428 GAGE12JA6NER3 117 aa14.77□□□□□ -0.05
R3HDM4-204ENST00000589428 IFI27P40305 119 aaPredicted RBP14.77□□□□□ -0.05
R3HDM4-204ENST00000589428 POLR2KP53803 58 aaKnown RBP14.77□□□□□ -0.05
R3HDM4-204ENST00000589428 GAGE1Q13065 139 aa14.77□□□□□ -0.05
R3HDM4-204ENST00000589428 GAGE4Q13068 117 aa14.77□□□□□ -0.05
R3HDM4-204ENST00000589428 GAGE5Q13069 117 aa14.77□□□□□ -0.05
R3HDM4-204ENST00000589428 GAGE13Q4V321 117 aa14.77□□□□□ -0.05
R3HDM4-204ENST00000589428 NEGR1Q7Z3B1 354 aa14.77□□□□□ -0.05
R3HDM4-204ENST00000589428 UBE2DNLQ8IWF7 75 aa14.77□□□□□ -0.05
R3HDM4-204ENST00000589428 IGLV2-18A0A075B6J9 118 aa14.76□□□□□ -0.05
R3HDM4-204ENST00000589428 TRBV7-3A0A075B6L6 115 aa14.76□□□□□ -0.05
R3HDM4-204ENST00000589428 GYPEP15421 78 aa14.76□□□□□ -0.05
R3HDM4-204ENST00000589428 LINC00310P59036 64 aa14.76□□□□□ -0.05
R3HDM4-204ENST00000589428 RPL36AP83881 106 aaKnown RBP14.76□□□□□ -0.05
R3HDM4-204ENST00000589428 BAGE3Q86Y29 109 aa14.76□□□□□ -0.05
R3HDM4-204ENST00000589428 ZNRF2Q8NHG8 242 aa14.76□□□□□ -0.05
R3HDM4-204ENST00000589428 RPL36ALQ969Q0 106 aaKnown RBP14.76□□□□□ -0.05
R3HDM4-204ENST00000589428 URB1-AS1Q96HZ7 61 aa14.76□□□□□ -0.05
R3HDM4-204ENST00000589428 LINC00694P0DN24 101 aa14.75□□□□□ -0.05
R3HDM4-204ENST00000589428 RPL32P62910 135 aaKnown RBP14.75□□□□□ -0.05
R3HDM4-204ENST00000589428 ICOSQ9Y6W8 199 aa14.75□□□□□ -0.05
R3HDM4-204ENST00000589428 TRBV27A0A0K0K1C4 114 aa14.75□□□□□ -0.05
R3HDM4-204ENST00000589428 PMCHP20382 165 aa14.75□□□□□ -0.05
R3HDM4-204ENST00000589428 NDUFA6P56556 154 aa14.75□□□□□ -0.05
R3HDM4-204ENST00000589428 PRSS3P2Q8NHM4 247 aa14.75□□□□□ -0.05
R3HDM4-204ENST00000589428 LOC105371267A0A1B0GV96 52 aa14.74□□□□□ -0.05
R3HDM4-204ENST00000589428 UBE2D3P61077 147 aa14.74□□□□□ -0.05
R3HDM4-204ENST00000589428 UBE2D2P62837 147 aa14.74□□□□□ -0.05
R3HDM4-204ENST00000589428 COA6Q5JTJ3 125 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms