RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 C15orf53Q8NAA6 179 aa13.9□□□□□ -0.18
DNMT1-216ENST00000588952 NEXN-AS1Q8NBZ9 246 aa13.9□□□□□ -0.18
DNMT1-216ENST00000588952 NCR2O95944 276 aa13.89□□□□□ -0.19
DNMT1-216ENST00000588952 S100A1P23297 94 aa13.89□□□□□ -0.19
DNMT1-216ENST00000588952 RPL39LQ96EH5 51 aaKnown RBP13.89□□□□□ -0.19
DNMT1-216ENST00000588952 ICOSQ9Y6W8 199 aa13.89□□□□□ -0.19
DNMT1-216ENST00000588952 TRBV24-1A0A075B6N3 115 aa13.88□□□□□ -0.19
DNMT1-216ENST00000588952 TRBV10-1A0A0K0K1A3 114 aa13.88□□□□□ -0.19
DNMT1-216ENST00000588952 RPS10P46783 165 aaKnown RBP13.87□□□□□ -0.19
DNMT1-216ENST00000588952 ZNRF2Q8NHG8 242 aa13.87□□□□□ -0.19
DNMT1-216ENST00000588952 TENM2Q9NT68 2774 aa13.87□□□□□ -0.19
DNMT1-216ENST00000588952 MRPL23Q16540 153 aaKnown RBP13.86□□□□□ -0.19
DNMT1-216ENST00000588952 MRAP2Q96G30 205 aa13.86□□□□□ -0.19
DNMT1-216ENST00000588952 LYSTQ99698 3801 aa13.85□□□□□ -0.19
DNMT1-216ENST00000588952 H7C1H1 209 aa13.85□□□□□ -0.19
DNMT1-216ENST00000588952 SRIP30626 198 aa13.85□□□□□ -0.19
DNMT1-216ENST00000588952 NRACQ8N912 160 aa13.85□□□□□ -0.19
DNMT1-216ENST00000588952 GNB1LQ9BYB4 327 aa13.85□□□□□ -0.19
DNMT1-216ENST00000588952 TRBV7-3A0A075B6L6 115 aa13.84□□□□□ -0.19
DNMT1-216ENST00000588952 TCTAP57738 103 aa13.84□□□□□ -0.19
DNMT1-216ENST00000588952 UBE2D3P61077 147 aa13.84□□□□□ -0.19
DNMT1-216ENST00000588952 UBE2D2P62837 147 aa13.84□□□□□ -0.19
DNMT1-216ENST00000588952 RPL36AP83881 106 aaKnown RBP13.84□□□□□ -0.19
DNMT1-216ENST00000588952 FRZBQ92765 325 aa13.84□□□□□ -0.19
DNMT1-216ENST00000588952 RPL36ALQ969Q0 106 aaKnown RBP13.84□□□□□ -0.19
DNMT1-216ENST00000588952 NIT2Q9NQR4 276 aa13.84□□□□□ -0.19
DNMT1-216ENST00000588952 D6R8Y8 96 aa13.83□□□□□ -0.2
DNMT1-216ENST00000588952 ALMS1Q8TCU4 4167 aa13.83□□□□□ -0.2
DNMT1-216ENST00000588952 HLA-DQA1P01909 254 aa13.82□□□□□ -0.2
DNMT1-216ENST00000588952 CKS2P33552 79 aa13.82□□□□□ -0.2
DNMT1-216ENST00000588952 ESRGQ1W209 222 aa13.82□□□□□ -0.2
DNMT1-216ENST00000588952 KIAA1644Q3SXP7 199 aa13.82□□□□□ -0.2
DNMT1-216ENST00000588952 OR10J3Q5JRS4 329 aa13.82□□□□□ -0.2
DNMT1-216ENST00000588952 NEGR1Q7Z3B1 354 aa13.82□□□□□ -0.2
DNMT1-216ENST00000588952 DNAJC30Q96LL9 226 aa13.82□□□□□ -0.2
DNMT1-216ENST00000588952 VPS13DQ5THJ4 4388 aa13.81□□□□□ -0.2
DNMT1-216ENST00000588952 IGHV3-38A0A0C4DH36 116 aa13.81□□□□□ -0.2
DNMT1-216ENST00000588952 COLCA2A8K830 154 aa13.81□□□□□ -0.2
DNMT1-216ENST00000588952 APCSP02743 223 aa13.81□□□□□ -0.2
DNMT1-216ENST00000588952 ATP6V0E2Q8NHE4 81 aa13.81□□□□□ -0.2
DNMT1-216ENST00000588952 TNFRSF18Q9Y5U5 241 aa13.81□□□□□ -0.2
DNMT1-216ENST00000588952 TRBV6-5A0A0K0K1A5 114 aa13.8□□□□□ -0.2
DNMT1-216ENST00000588952 COX19Q49B96 90 aa13.8□□□□□ -0.2
DNMT1-216ENST00000588952 LYPD5Q6UWN5 251 aa13.8□□□□□ -0.2
DNMT1-216ENST00000588952 MRPL18Q9H0U6 180 aaKnown RBP13.8□□□□□ -0.2
DNMT1-216ENST00000588952 DNAH1Q9P2D7 4330 aa13.8□□□□□ -0.2
DNMT1-216ENST00000588952 NPYP01303 97 aa13.79□□□□□ -0.2
DNMT1-216ENST00000588952 LINC00588Q9Y4M8 146 aa13.79□□□□□ -0.2
DNMT1-216ENST00000588952 TNFRSF6BO95407 300 aa13.78□□□□□ -0.2
DNMT1-216ENST00000588952 MT-ND6P03923 174 aa13.78□□□□□ -0.2
DNMT1-216ENST00000588952 SH2D6Q7Z4S9 175 aa13.78□□□□□ -0.2
DNMT1-216ENST00000588952 ORMDL3Q8N138 153 aa13.78□□□□□ -0.2
DNMT1-216ENST00000588952 DEFB104AQ8WTQ1 72 aa13.78□□□□□ -0.2
DNMT1-216ENST00000588952 PRELID3AQ96N28 172 aa13.78□□□□□ -0.2
DNMT1-216ENST00000588952 SDHAF1A6NFY7 115 aa13.77□□□□□ -0.21
DNMT1-216ENST00000588952 PPBPP02775 128 aa13.77□□□□□ -0.21
DNMT1-216ENST00000588952 GTSF1LQ9H1H1 148 aa13.77□□□□□ -0.21
DNMT1-216ENST00000588952 ST20Q9HBF5 79 aa13.77□□□□□ -0.21
DNMT1-216ENST00000588952 TRAPPC1Q9Y5R8 145 aa13.77□□□□□ -0.21
DNMT1-216ENST00000588952 FABP9Q0Z7S8 132 aa13.76□□□□□ -0.21
DNMT1-216ENST00000588952 TMEM70Q9BUB7 260 aa13.76□□□□□ -0.21
DNMT1-216ENST00000588952 POLR2KP53803 58 aaKnown RBP13.75□□□□□ -0.21
DNMT1-216ENST00000588952 TIRAPP58753 221 aa13.75□□□□□ -0.21
DNMT1-216ENST00000588952 NTM-AS1Q6ZSK4 140 aa13.75□□□□□ -0.21
DNMT1-216ENST00000588952 DAZ4Q86SG3 579 aaKnown RBP13.75□□□□□ -0.21
DNMT1-216ENST00000588952 DAZ3Q9NR90 486 aaKnown RBP13.75□□□□□ -0.21
DNMT1-216ENST00000588952 CCL18P55774 89 aa13.74□□□□□ -0.21
DNMT1-216ENST00000588952 SUMO2P61956 95 aaKnown RBP13.74□□□□□ -0.21
DNMT1-216ENST00000588952 MRPS16Q9Y3D3 137 aaKnown RBP13.74□□□□□ -0.21
DNMT1-216ENST00000588952 PHOX2AO14813 284 aa13.73□□□□□ -0.21
DNMT1-216ENST00000588952 PPP1R17O96001 155 aa13.73□□□□□ -0.21
DNMT1-216ENST00000588952 RAB5AP20339 215 aa13.73□□□□□ -0.21
DNMT1-216ENST00000588952 LINC00476Q8WZB0 136 aa13.73□□□□□ -0.21
DNMT1-216ENST00000588952 C20orf78Q9BR46 151 aa13.73□□□□□ -0.21
DNMT1-216ENST00000588952 ALKBH7Q9BT30 221 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-216ENST00000588952 LELP1Q5T871 98 aa13.72□□□□□ -0.21
DNMT1-216ENST00000588952 LGALS9CQ6DKI2 356 aa13.72□□□□□ -0.21
DNMT1-216ENST00000588952 UBE2DNLQ8IWF7 75 aa13.72□□□□□ -0.21
DNMT1-216ENST00000588952 SACSQ9NZJ4 4579 aa13.71□□□□□ -0.21
DNMT1-216ENST00000588952 TRBV27A0A0K0K1C4 114 aa13.71□□□□□ -0.21
DNMT1-216ENST00000588952 LAMTOR2Q9Y2Q5 125 aa13.71□□□□□ -0.21
DNMT1-216ENST00000588952 TRBV6-8A0A0A6YYG3 113 aa13.7□□□□□ -0.22
DNMT1-216ENST00000588952 I3L3M4 83 aa13.7□□□□□ -0.22
DNMT1-216ENST00000588952 TSHBP01222 138 aa13.7□□□□□ -0.22
DNMT1-216ENST00000588952 RPL32P62910 135 aaKnown RBP13.7□□□□□ -0.22
DNMT1-216ENST00000588952 WFDC10BQ8IUB3 73 aa13.7□□□□□ -0.22
DNMT1-216ENST00000588952 SMIM2Q9BVW6 85 aa13.7□□□□□ -0.22
DNMT1-216ENST00000588952 IGLV2-18A0A075B6J9 118 aa13.69□□□□□ -0.22
DNMT1-216ENST00000588952 LOC389332A0A1B0GUA5 103 aa13.69□□□□□ -0.22
DNMT1-216ENST00000588952 PRSS47A8MTI9 375 aa13.69□□□□□ -0.22
DNMT1-216ENST00000588952 LY6G6CO95867 125 aa13.69□□□□□ -0.22
DNMT1-216ENST00000588952 TRGC2P03986 189 aa13.69□□□□□ -0.22
DNMT1-216ENST00000588952 PMCHP20382 165 aa13.69□□□□□ -0.22
DNMT1-216ENST00000588952 UPK3BQ9BT76 320 aa13.69□□□□□ -0.22
DNMT1-216ENST00000588952 VCYO14598 125 aa13.68□□□□□ -0.22
DNMT1-216ENST00000588952 COTL1Q14019 142 aa13.68□□□□□ -0.22
DNMT1-216ENST00000588952 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-216ENST00000588952 MAP1LC3AQ9H492 121 aa13.68□□□□□ -0.22
DNMT1-216ENST00000588952 IQCJQ1A5X6 159 aa13.67□□□□□ -0.22
DNMT1-216ENST00000588952 DNAH6Q9C0G6 4158 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms