RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 A0A0J9YY99 117 aa11.87□□□□□ -0.51
SCAMP4-211ENST00000588907 IGLL5B9A064 214 aa11.87□□□□□ -0.51
SCAMP4-211ENST00000588907 GYPEP15421 78 aa11.87□□□□□ -0.51
SCAMP4-211ENST00000588907 CKS2P33552 79 aa11.87□□□□□ -0.51
SCAMP4-211ENST00000588907 PHOX2AO14813 284 aa11.86□□□□□ -0.51
SCAMP4-211ENST00000588907 SCO1O75880 301 aa11.86□□□□□ -0.51
SCAMP4-211ENST00000588907 SRIP30626 198 aa11.86□□□□□ -0.51
SCAMP4-211ENST00000588907 TRAPPC1Q9Y5R8 145 aa11.86□□□□□ -0.51
SCAMP4-211ENST00000588907 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
SCAMP4-211ENST00000588907 TRAV26-2A0A0B4J265 109 aa11.85□□□□□ -0.51
SCAMP4-211ENST00000588907 TRBV6-5A0A0K0K1A5 114 aa11.85□□□□□ -0.51
SCAMP4-211ENST00000588907 OR10J3Q5JRS4 329 aa11.85□□□□□ -0.51
SCAMP4-211ENST00000588907 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
SCAMP4-211ENST00000588907 COLCA2A8K830 154 aa11.84□□□□□ -0.51
SCAMP4-211ENST00000588907 D6R8Y8 96 aa11.84□□□□□ -0.51
SCAMP4-211ENST00000588907 DAZ4Q86SG3 579 aaKnown RBP11.84□□□□□ -0.51
SCAMP4-211ENST00000588907 NEXN-AS1Q8NBZ9 246 aa11.84□□□□□ -0.51
SCAMP4-211ENST00000588907 DAZ3Q9NR90 486 aaKnown RBP11.84□□□□□ -0.51
SCAMP4-211ENST00000588907 NUDT3O95989 172 aa11.83□□□□□ -0.52
SCAMP4-211ENST00000588907 LINC00694P0DN24 101 aa11.83□□□□□ -0.52
SCAMP4-211ENST00000588907 RAB5AP20339 215 aa11.83□□□□□ -0.52
SCAMP4-211ENST00000588907 FABP9Q0Z7S8 132 aa11.83□□□□□ -0.52
SCAMP4-211ENST00000588907 NEGR1Q7Z3B1 354 aa11.83□□□□□ -0.52
SCAMP4-211ENST00000588907 PRELID3AQ96N28 172 aa11.83□□□□□ -0.52
SCAMP4-211ENST00000588907 C20orf78Q9BR46 151 aa11.83□□□□□ -0.52
SCAMP4-211ENST00000588907 ST20Q9HBF5 79 aa11.83□□□□□ -0.52
SCAMP4-211ENST00000588907 GAGE12JA6NER3 117 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 P0DMU3 169 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 FAM231AP0DMU4 169 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 FAM231CP0DMU5 169 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 RPS10P46783 165 aaKnown RBP11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 GAGE1Q13065 139 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 GAGE4Q13068 117 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 GAGE5Q13069 117 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 GAGE13Q4V321 117 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 TMEM97Q5BJF2 176 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 ZNRF2Q8NHG8 242 aa11.82□□□□□ -0.52
SCAMP4-211ENST00000588907 A0A096LPF7 62 aa11.81□□□□□ -0.52
SCAMP4-211ENST00000588907 NCR2O95944 276 aa11.81□□□□□ -0.52
SCAMP4-211ENST00000588907 UBE2D3P61077 147 aa11.81□□□□□ -0.52
SCAMP4-211ENST00000588907 UBE2D2P62837 147 aa11.81□□□□□ -0.52
SCAMP4-211ENST00000588907 ZFAND6Q6FIF0 208 aa11.81□□□□□ -0.52
SCAMP4-211ENST00000588907 NRACQ8N912 160 aa11.81□□□□□ -0.52
SCAMP4-211ENST00000588907 LOC100131303A0A0U1RQF7 123 aa11.8□□□□□ -0.52
SCAMP4-211ENST00000588907 TNFRSF6BO95407 300 aa11.8□□□□□ -0.52
SCAMP4-211ENST00000588907 TIRAPP58753 221 aa11.8□□□□□ -0.52
SCAMP4-211ENST00000588907 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-211ENST00000588907 RPL32P62910 135 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-211ENST00000588907 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
SCAMP4-211ENST00000588907 RPL39LQ96EH5 51 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-211ENST00000588907 CSMD3Q7Z407 3707 aa11.8□□□□□ -0.52
SCAMP4-211ENST00000588907 SDHAF1A6NFY7 115 aa11.79□□□□□ -0.52
SCAMP4-211ENST00000588907 SMKR1H3BMG3 65 aa11.79□□□□□ -0.52
SCAMP4-211ENST00000588907 TCAPO15273 167 aa11.79□□□□□ -0.52
SCAMP4-211ENST00000588907 CASC10Q5T4H9 136 aa11.79□□□□□ -0.52
SCAMP4-211ENST00000588907 GTSF1LQ9H1H1 148 aa11.79□□□□□ -0.52
SCAMP4-211ENST00000588907 MAP1LC3AQ9H492 121 aa11.79□□□□□ -0.52
SCAMP4-211ENST00000588907 APLNQ9ULZ1 77 aa11.79□□□□□ -0.52
SCAMP4-211ENST00000588907 STARD9Q9P2P6 4700 aa11.78□□□□□ -0.52
SCAMP4-211ENST00000588907 VCYO14598 125 aa11.78□□□□□ -0.52
SCAMP4-211ENST00000588907 TRBV27A0A0K0K1C4 114 aa11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 PRSS47A8MTI9 375 aa11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 I3L3M4 83 aa11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 NPYP01303 97 aa11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 CCL18P55774 89 aa11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 KIAA1644Q3SXP7 199 aa11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 KIR2DL4Q99706 377 aa11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 ALKBH7Q9BT30 221 aaPredicted RBP11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 TMEM70Q9BUB7 260 aa11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 Q9UF83 564 aa11.77□□□□□ -0.53
SCAMP4-211ENST00000588907 GAS8-AS1O95177 125 aa11.76□□□□□ -0.53
SCAMP4-211ENST00000588907 PMCHP20382 165 aa11.76□□□□□ -0.53
SCAMP4-211ENST00000588907 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
SCAMP4-211ENST00000588907 SMIM2Q9BVW6 85 aa11.76□□□□□ -0.53
SCAMP4-211ENST00000588907 K7EMI3 77 aa11.75□□□□□ -0.53
SCAMP4-211ENST00000588907 TRGC2P03986 189 aa11.75□□□□□ -0.53
SCAMP4-211ENST00000588907 COTL1Q14019 142 aa11.75□□□□□ -0.53
SCAMP4-211ENST00000588907 NXT2Q9NPJ8 142 aaKnown RBP11.75□□□□□ -0.53
SCAMP4-211ENST00000588907 PLECQ15149 4684 aaKnown RBP11.74□□□□□ -0.53
SCAMP4-211ENST00000588907 PKIAP61925 76 aa11.73□□□□□ -0.53
SCAMP4-211ENST00000588907 LELP1Q5T871 98 aa11.73□□□□□ -0.53
SCAMP4-211ENST00000588907 LYPD5Q6UWN5 251 aa11.73□□□□□ -0.53
SCAMP4-211ENST00000588907 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
SCAMP4-211ENST00000588907 TRBV6-8A0A0A6YYG3 113 aa11.72□□□□□ -0.53
SCAMP4-211ENST00000588907 TRAV8-6A0A0B4J262 113 aa11.71□□□□□ -0.53
SCAMP4-211ENST00000588907 IGHV1-24A0A0C4DH33 117 aa11.71□□□□□ -0.53
SCAMP4-211ENST00000588907 IGHV3-38A0A0C4DH36 116 aa11.71□□□□□ -0.53
SCAMP4-211ENST00000588907 FCER1GP30273 86 aa11.71□□□□□ -0.53
SCAMP4-211ENST00000588907 RAB5BP61020 215 aa11.71□□□□□ -0.53
SCAMP4-211ENST00000588907 ESRGQ1W209 222 aa11.71□□□□□ -0.53
SCAMP4-211ENST00000588907 UBE2DNLQ8IWF7 75 aa11.71□□□□□ -0.53
SCAMP4-211ENST00000588907 Q8N8P6 123 aa11.71□□□□□ -0.53
SCAMP4-211ENST00000588907 MRPS16Q9Y3D3 137 aaKnown RBP11.71□□□□□ -0.53
SCAMP4-211ENST00000588907 G0S2P27469 103 aa11.7□□□□□ -0.54
SCAMP4-211ENST00000588907 IQCJQ1A5X6 159 aa11.7□□□□□ -0.54
SCAMP4-211ENST00000588907 PRSS3P2Q8NHM4 247 aa11.7□□□□□ -0.54
SCAMP4-211ENST00000588907 UPK3BQ9BT76 320 aa11.7□□□□□ -0.54
SCAMP4-211ENST00000588907 LOC389332A0A1B0GUA5 103 aa11.69□□□□□ -0.54
SCAMP4-211ENST00000588907 AMTP48728 403 aa11.69□□□□□ -0.54
SCAMP4-211ENST00000588907 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms