RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 A0A1B0GV72 72 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 LINC01619G3V211 115 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 PPP1R17O96001 155 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 SCGB1A1P11684 91 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 PSMB8P28062 276 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 ID1P41134 155 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 RNASE13Q5GAN3 156 aaKnown RBP11.28□□□□□ -0.6
SAFB-205ENST00000588852 CEMP1Q6PRD7 247 aaPredicted RBP11.28□□□□□ -0.6
SAFB-205ENST00000588852 NDUFA11Q86Y39 141 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 ADARB2-AS1A8MUL3 147 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 H3BUA1 57 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 CFAP126Q5VTH2 177 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 AMELXQ99217 191 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 USP24Q9UPU5 2620 aa11.28□□□□□ -0.6
SAFB-205ENST00000588852 NIPBLQ6KC79 2804 aaeCLIP11.28□□□□□ -0.6
SAFB-205ENST00000588852 TRBV27A0A0K0K1C4 114 aa11.27□□□□□ -0.6
SAFB-205ENST00000588852 H7C2G1 150 aa11.27□□□□□ -0.6
SAFB-205ENST00000588852 J3QR89 54 aa11.27□□□□□ -0.6
SAFB-205ENST00000588852 ZNF876PQ49A33 203 aa11.27□□□□□ -0.6
SAFB-205ENST00000588852 SPATA25Q9BR10 227 aa11.27□□□□□ -0.6
SAFB-205ENST00000588852 A0A0J9YX75 114 aa11.27□□□□□ -0.61
SAFB-205ENST00000588852 NDUFS8O00217 210 aa11.27□□□□□ -0.61
SAFB-205ENST00000588852 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
SAFB-205ENST00000588852 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
SAFB-205ENST00000588852 PTPN13Q12923 2485 aa11.27□□□□□ -0.61
SAFB-205ENST00000588852 LRRK2Q5S007 2527 aa11.27□□□□□ -0.61
SAFB-205ENST00000588852 SETD2Q9BYW2 2564 aaPredicted RBP11.27□□□□□ -0.61
SAFB-205ENST00000588852 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.61
SAFB-205ENST00000588852 TCL1BO95988 128 aa11.27□□□□□ -0.61
SAFB-205ENST00000588852 C9orf85Q96MD7 179 aa11.27□□□□□ -0.61
SAFB-205ENST00000588852 NF1P21359 2839 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 KNCNA6PVL3 124 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 J3QQQ9 107 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 LGALS9O00182 355 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 RBMY1A1P0DJD3 496 aaKnown RBP11.26□□□□□ -0.61
SAFB-205ENST00000588852 RBMY1CP0DJD4 496 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 FHL3Q13643 280 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 RBMY1FQ15415 496 aaKnown RBP11.26□□□□□ -0.61
SAFB-205ENST00000588852 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 TMEM238LA0A1B0GVL6 79 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 A6NJY4 79 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 CKS1BP61024 79 aa11.26□□□□□ -0.61
SAFB-205ENST00000588852 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
SAFB-205ENST00000588852 TRBV7-9A0A0J9YWB2 115 aa11.25□□□□□ -0.61
SAFB-205ENST00000588852 BRI3O95415 125 aa11.25□□□□□ -0.61
SAFB-205ENST00000588852 HERVK_113P61574 105 aa11.25□□□□□ -0.61
SAFB-205ENST00000588852 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
SAFB-205ENST00000588852 WNK1Q9H4A3 2382 aa11.25□□□□□ -0.61
SAFB-205ENST00000588852 C18orf65Q6ZTR6 163 aa11.25□□□□□ -0.61
SAFB-205ENST00000588852 SLC25A29Q8N8R3 303 aa11.25□□□□□ -0.61
SAFB-205ENST00000588852 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
SAFB-205ENST00000588852 CHD6Q8TD26 2715 aa11.25□□□□□ -0.61
SAFB-205ENST00000588852 C2CD3Q4AC94 2353 aa11.24□□□□□ -0.61
SAFB-205ENST00000588852 K7EMT4 169 aa11.24□□□□□ -0.61
SAFB-205ENST00000588852 FOXI1Q12951 378 aa11.24□□□□□ -0.61
SAFB-205ENST00000588852 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
SAFB-205ENST00000588852 SONP18583 2426 aaKnown RBP11.24□□□□□ -0.61
SAFB-205ENST00000588852 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
SAFB-205ENST00000588852 UBE2D3P61077 147 aa11.24□□□□□ -0.61
SAFB-205ENST00000588852 UBE2D2P62837 147 aa11.24□□□□□ -0.61
SAFB-205ENST00000588852 TMEM141Q96I45 108 aa11.24□□□□□ -0.61
SAFB-205ENST00000588852 TRAV2A0A0B4J234 112 aa11.23□□□□□ -0.61
SAFB-205ENST00000588852 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
SAFB-205ENST00000588852 A4D1N5 150 aa11.23□□□□□ -0.61
SAFB-205ENST00000588852 K7EQG2 157 aa11.23□□□□□ -0.61
SAFB-205ENST00000588852 LGALS3P17931 250 aaKnown RBP11.23□□□□□ -0.61
SAFB-205ENST00000588852 SNRPD3P62318 126 aaKnown RBP11.23□□□□□ -0.61
SAFB-205ENST00000588852 PRORYQ9H606 182 aa11.23□□□□□ -0.61
SAFB-205ENST00000588852 SPXQ9BT56 116 aa11.22□□□□□ -0.61
SAFB-205ENST00000588852 TRAV26-1A0A087WT03 109 aa11.22□□□□□ -0.61
SAFB-205ENST00000588852 A8MZ25 164 aa11.22□□□□□ -0.61
SAFB-205ENST00000588852 RPL32P62910 135 aaKnown RBP11.22□□□□□ -0.61
SAFB-205ENST00000588852 CARD19Q96LW7 228 aa11.22□□□□□ -0.61
SAFB-205ENST00000588852 SCGB1C2P0DMR2 95 aa11.22□□□□□ -0.61
SAFB-205ENST00000588852 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
SAFB-205ENST00000588852 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.61
SAFB-205ENST00000588852 PAPPA-AS1Q5QFB9 102 aa11.21□□□□□ -0.61
SAFB-205ENST00000588852 TRPT1Q86TN4 253 aaKnown RBP11.21□□□□□ -0.61
SAFB-205ENST00000588852 PRRC2AP48634 2157 aaKnown RBP11.21□□□□□ -0.62
SAFB-205ENST00000588852 TRAV8-3A0A0A6YYJ7 113 aa11.21□□□□□ -0.62
SAFB-205ENST00000588852 B4DSR2 109 aa11.21□□□□□ -0.62
SAFB-205ENST00000588852 ELANEP08246 267 aa11.21□□□□□ -0.62
SAFB-205ENST00000588852 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.62
SAFB-205ENST00000588852 C20orf203Q8NBC4 194 aa11.21□□□□□ -0.62
SAFB-205ENST00000588852 TMEM223A0PJW6 202 aa11.2□□□□□ -0.62
SAFB-205ENST00000588852 MUSTN1Q8IVN3 82 aa11.2□□□□□ -0.62
SAFB-205ENST00000588852 C10orf126Q8N4M7 172 aa11.2□□□□□ -0.62
SAFB-205ENST00000588852 IGLV4-3A0A075B6K6 122 aa11.2□□□□□ -0.62
SAFB-205ENST00000588852 HOXD3P31249 432 aaPredicted RBP11.2□□□□□ -0.62
SAFB-205ENST00000588852 Q6ZSN1 163 aa11.2□□□□□ -0.62
SAFB-205ENST00000588852 FAM104AQ969W3 186 aa11.2□□□□□ -0.62
SAFB-205ENST00000588852 CDIP1Q9H305 208 aa11.2□□□□□ -0.62
SAFB-205ENST00000588852 PRO1854Q9UHT4 67 aa11.19□□□□□ -0.62
SAFB-205ENST00000588852 RHODO00212 210 aa11.19□□□□□ -0.62
SAFB-205ENST00000588852 NPC2P61916 151 aa11.19□□□□□ -0.62
SAFB-205ENST00000588852 VCX2Q9H322 139 aa11.19□□□□□ -0.62
SAFB-205ENST00000588852 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
SAFB-205ENST00000588852 NBPF19A0A087WUL8 3843 aa11.19□□□□□ -0.62
SAFB-205ENST00000588852 SLURP1P55000 103 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 255.1 ms