RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 RMI2Q96E14 147 aa13.05□□□□□ -0.32
TPM4-208ENST00000588410 TMEM262E9PQX1 116 aa13.04□□□□□ -0.32
TPM4-208ENST00000588410 F2Z2F3 143 aa13.04□□□□□ -0.32
TPM4-208ENST00000588410 MGPP08493 103 aa13.04□□□□□ -0.32
TPM4-208ENST00000588410 Q8N1X5 172 aa13.04□□□□□ -0.32
TPM4-208ENST00000588410 Q8N814 137 aa13.04□□□□□ -0.32
TPM4-208ENST00000588410 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
TPM4-208ENST00000588410 KRTAP4-5Q9BYR2 181 aa13.04□□□□□ -0.32
TPM4-208ENST00000588410 COX11Q9Y6N1 276 aa13.04□□□□□ -0.32
TPM4-208ENST00000588410 TRBV6-8A0A0A6YYG3 113 aa13.03□□□□□ -0.32
TPM4-208ENST00000588410 KRTAP10-1P60331 282 aa13.03□□□□□ -0.32
TPM4-208ENST00000588410 KLK12Q9UKR0 248 aa13.03□□□□□ -0.32
TPM4-208ENST00000588410 KIF25-AS1Q9Y6Z4 181 aa13.03□□□□□ -0.32
TPM4-208ENST00000588410 APOBP04114 4563 aaKnown RBP13.02□□□□□ -0.32
TPM4-208ENST00000588410 NUDT10Q8NFP7 164 aa13.02□□□□□ -0.33
TPM4-208ENST00000588410 NUDT11Q96G61 164 aa13.02□□□□□ -0.33
TPM4-208ENST00000588410 H7C1H1 209 aa13.01□□□□□ -0.33
TPM4-208ENST00000588410 TRGC1P0CF51 173 aa13.01□□□□□ -0.33
TPM4-208ENST00000588410 TMEM97Q5BJF2 176 aa13.01□□□□□ -0.33
TPM4-208ENST00000588410 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
TPM4-208ENST00000588410 UBE2WQ96B02 151 aa13.01□□□□□ -0.33
TPM4-208ENST00000588410 ABCA13Q86UQ4 5058 aa13□□□□□ -0.33
TPM4-208ENST00000588410 PKIAP61925 76 aa13□□□□□ -0.33
TPM4-208ENST00000588410 CHCHD5Q9BSY4 110 aa13□□□□□ -0.33
TPM4-208ENST00000588410 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
TPM4-208ENST00000588410 IGKV2D-24A0A075B6R9 120 aa12.99□□□□□ -0.33
TPM4-208ENST00000588410 TMEM250H0YL14 139 aa12.99□□□□□ -0.33
TPM4-208ENST00000588410 OCC1Q8TAD7 63 aa12.99□□□□□ -0.33
TPM4-208ENST00000588410 DNAJC30Q96LL9 226 aa12.99□□□□□ -0.33
TPM4-208ENST00000588410 LECT2O14960 151 aa12.98□□□□□ -0.33
TPM4-208ENST00000588410 NKX2-5P52952 324 aaPredicted RBP12.98□□□□□ -0.33
TPM4-208ENST00000588410 CEBPGP53567 150 aa12.98□□□□□ -0.33
TPM4-208ENST00000588410 Q0VG73 95 aa12.98□□□□□ -0.33
TPM4-208ENST00000588410 SUMO4Q6EEV6 95 aa12.98□□□□□ -0.33
TPM4-208ENST00000588410 RNASE7Q9H1E1 156 aaKnown RBP12.98□□□□□ -0.33
TPM4-208ENST00000588410 K7EN84 100 aa12.97□□□□□ -0.33
TPM4-208ENST00000588410 M0QY20 66 aa12.97□□□□□ -0.33
TPM4-208ENST00000588410 CRPP02741 224 aa12.97□□□□□ -0.33
TPM4-208ENST00000588410 NTF3P20783 257 aa12.97□□□□□ -0.33
TPM4-208ENST00000588410 WDR73Q6P4I2 378 aa12.97□□□□□ -0.33
TPM4-208ENST00000588410 BAALCQ8WXS3 180 aa12.97□□□□□ -0.33
TPM4-208ENST00000588410 DPH3P1Q9H4G8 78 aa12.97□□□□□ -0.33
TPM4-208ENST00000588410 CTRLP40313 264 aa12.96□□□□□ -0.33
TPM4-208ENST00000588410 WFDC2Q14508 124 aa12.96□□□□□ -0.33
TPM4-208ENST00000588410 TWIST1Q15672 202 aa12.96□□□□□ -0.33
TPM4-208ENST00000588410 C15orf54Q8N8G6 183 aa12.96□□□□□ -0.33
TPM4-208ENST00000588410 LYPD6BQ8NI32 183 aa12.96□□□□□ -0.33
TPM4-208ENST00000588410 EIF5A2Q9GZV4 153 aaKnown RBP12.96□□□□□ -0.33
TPM4-208ENST00000588410 TRBV25-1A0A075B6N4 114 aa12.95□□□□□ -0.34
TPM4-208ENST00000588410 ANGP03950 147 aaKnown RBP12.95□□□□□ -0.34
TPM4-208ENST00000588410 XGP55808 180 aa12.95□□□□□ -0.34
TPM4-208ENST00000588410 MPV17L2Q567V2 206 aa12.95□□□□□ -0.34
TPM4-208ENST00000588410 RASL11AQ6T310 242 aa12.95□□□□□ -0.34
TPM4-208ENST00000588410 A0A1B0GVG6 124 aa12.94□□□□□ -0.34
TPM4-208ENST00000588410 GATCO43716 136 aaKnown RBP12.94□□□□□ -0.34
TPM4-208ENST00000588410 NTM-AS1Q6ZSK4 140 aa12.94□□□□□ -0.34
TPM4-208ENST00000588410 C1orf43Q9BWL3 253 aa12.94□□□□□ -0.34
TPM4-208ENST00000588410 IGHV1-24A0A0C4DH33 117 aa12.93□□□□□ -0.34
TPM4-208ENST00000588410 EPM2AB3EWF7 344 aa12.93□□□□□ -0.34
TPM4-208ENST00000588410 GAGE6Q13070 117 aa12.93□□□□□ -0.34
TPM4-208ENST00000588410 SMIM15Q7Z3B0 74 aa12.93□□□□□ -0.34
TPM4-208ENST00000588410 Q8N976 141 aa12.93□□□□□ -0.34
TPM4-208ENST00000588410 TMEM70Q9BUB7 260 aa12.93□□□□□ -0.34
TPM4-208ENST00000588410 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.92□□□□□ -0.34
TPM4-208ENST00000588410 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
TPM4-208ENST00000588410 NIT2Q9NQR4 276 aa12.92□□□□□ -0.34
TPM4-208ENST00000588410 IQCJQ1A5X6 159 aa12.91□□□□□ -0.34
TPM4-208ENST00000588410 ENHOQ6UWT2 76 aa12.91□□□□□ -0.34
TPM4-208ENST00000588410 SMIM7Q9BQ49 75 aa12.91□□□□□ -0.34
TPM4-208ENST00000588410 CNFNQ9BYD5 112 aa12.91□□□□□ -0.34
TPM4-208ENST00000588410 A8MWL6 223 aa12.9□□□□□ -0.34
TPM4-208ENST00000588410 RBX1P62877 108 aa12.9□□□□□ -0.34
TPM4-208ENST00000588410 FAM231DQ6ZW35 169 aa12.9□□□□□ -0.34
TPM4-208ENST00000588410 FRZBQ92765 325 aa12.9□□□□□ -0.34
TPM4-208ENST00000588410 FAM210AQ96ND0 272 aa12.9□□□□□ -0.34
TPM4-208ENST00000588410 GTSF1Q8WW33 167 aa12.89□□□□□ -0.35
TPM4-208ENST00000588410 NDUFS6O75380 124 aaKnown RBP12.88□□□□□ -0.35
TPM4-208ENST00000588410 MIAQ16674 131 aa12.88□□□□□ -0.35
TPM4-208ENST00000588410 BORCS7Q96B45 105 aa12.88□□□□□ -0.35
TPM4-208ENST00000588410 PGLYRP4Q96LB8 373 aa12.88□□□□□ -0.35
TPM4-208ENST00000588410 TMEM243Q9BU79 118 aa12.88□□□□□ -0.35
TPM4-208ENST00000588410 ZNF727A8MUV8 499 aa12.87□□□□□ -0.35
TPM4-208ENST00000588410 HAMPP81172 84 aa12.87□□□□□ -0.35
TPM4-208ENST00000588410 C14orf177Q52M58 125 aa12.87□□□□□ -0.35
TPM4-208ENST00000588410 SMR3BP02814 79 aaPredicted RBP12.86□□□□□ -0.35
TPM4-208ENST00000588410 COTL1Q14019 142 aa12.86□□□□□ -0.35
TPM4-208ENST00000588410 CT83Q5H943 113 aa12.86□□□□□ -0.35
TPM4-208ENST00000588410 CLPSL2Q6UWE3 100 aa12.86□□□□□ -0.35
TPM4-208ENST00000588410 LINC00269Q8N2A0 174 aa12.86□□□□□ -0.35
TPM4-208ENST00000588410 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
TPM4-208ENST00000588410 UBE2L6O14933 153 aa12.85□□□□□ -0.35
TPM4-208ENST00000588410 SRP19P09132 144 aaKnown RBP12.85□□□□□ -0.35
TPM4-208ENST00000588410 Q5VSD8 79 aa12.85□□□□□ -0.35
TPM4-208ENST00000588410 LINC01551Q86U37 167 aa12.85□□□□□ -0.35
TPM4-208ENST00000588410 GATD1Q8NB37 220 aa12.85□□□□□ -0.35
TPM4-208ENST00000588410 HLA-DQA1P01909 254 aa12.84□□□□□ -0.35
TPM4-208ENST00000588410 AMTP48728 403 aa12.84□□□□□ -0.35
TPM4-208ENST00000588410 TEX261Q6UWH6 196 aa12.84□□□□□ -0.35
TPM4-208ENST00000588410 DEFB104AQ8WTQ1 72 aa12.84□□□□□ -0.35
TPM4-208ENST00000588410 PRR34Q9NV39 138 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms