RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 TRBV24-1A0A075B6N3 115 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 IGHV3-73A0A0B4J1V6 119 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 TRAV4A0A0B4J268 109 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 A0A1B0GXF2 115 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 H0Y8G0 127 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 RHODO00212 210 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 RS1O15537 224 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 S100A6P06703 90 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 EVI2AP22794 236 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 CTAG1AP78358 180 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 ZNF56Q15929 161 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 PIK3CD-AS1Q5SR53 167 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 CFAP126Q5VTH2 177 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 RASL11AQ6T310 242 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 C11orf45Q8TAV5 145 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 NTN5Q8WTR8 489 aaPredicted RBP3.77□□□□□ -1.81
LIG3-210ENST00000588109 TMEM191AQ9H0A3 160 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 DPH3P1Q9H4G8 78 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 JPT2Q9H910 190 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 CELA1Q9UNI1 258 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 U3KQK5 164 aa3.77□□□□□ -1.81
LIG3-210ENST00000588109 HUWE1Q7Z6Z7 4374 aaKnown RBP3.77□□□□□ -1.81
LIG3-210ENST00000588109 DNAH9Q9NYC9 4486 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 TRGV4A0A0C4DH28 118 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 CIDEAO60543 219 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 HLA-DQA1P01909 254 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 APCSP02743 223 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 MT-ND6P03923 174 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 ATP5G1P05496 136 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 HTN3P15516 51 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 RAB5AP20339 215 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 RPS10P46783 165 aaKnown RBP3.76□□□□□ -1.81
LIG3-210ENST00000588109 NANOS2P60321 138 aaKnown RBP3.76□□□□□ -1.81
LIG3-210ENST00000588109 TMEM136Q6ZRR5 245 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 AMN1Q8IY45 258 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 LINC00612Q8N6U2 182 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 ZNF479Q96JC4 524 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 YPEL4Q96NS1 127 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 GNB1LQ9BYB4 327 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 SAMD10Q9BYL1 202 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 TRAPPC1Q9Y5R8 145 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 MUC4Q99102 2169 aa3.76□□□□□ -1.81
LIG3-210ENST00000588109 NBEAL2Q6ZNJ1 2754 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 COLCA2A8K830 154 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 F5H768 121 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 H7C1H1 209 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 CRYGDP07320 174 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 RAB4AP20338 218 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 CKS2P33552 79 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 FABP9Q0Z7S8 132 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 C12orf74Q32Q52 190 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 FAM104BQ5XKR9 115 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 ZFP2Q6ZN57 461 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 Q6ZTC4 211 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 POM121L12Q8N7R1 296 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 GATD1Q8NB37 220 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 C18orf15Q96N68 181 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 VCX2Q9H322 139 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 MEGF8Q7Z7M0 2845 aa3.75□□□□□ -1.81
LIG3-210ENST00000588109 TRAV26-2A0A0B4J265 109 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 C5orf52A6NGY3 159 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 D6R8Y8 96 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 SMKR1H3BMG3 65 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 NCR2O95944 276 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 LINC00315P59091 139 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 SLAQ13239 276 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 KIAA1644Q3SXP7 199 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 MRPL51Q4U2R6 128 aaKnown RBP3.74□□□□□ -1.81
LIG3-210ENST00000588109 ORMDL3Q8N138 153 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 MRAP2Q96G30 205 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 RNF185Q96GF1 192 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 PRADC1Q9BSG0 188 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 HHLA3Q9XRX5 114 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 KIF25-AS1Q9Y6Z4 181 aa3.74□□□□□ -1.81
LIG3-210ENST00000588109 PRKDCP78527 4128 aaKnown RBP3.73□□□□□ -1.81
LIG3-210ENST00000588109 TRAV26-1A0A087WT03 109 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 DEFB131BA0A096LNP1 70 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 TRAV10A0A0B4J240 114 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 A0A0J9YY99 117 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 TRBV6-4A0A1B0GX49 114 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 K7EQD1 137 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 PPP1R17O96001 155 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 PPBPP02775 128 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 TRGC2P03986 189 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 GATA1P15976 413 aaPredicted RBP3.73□□□□□ -1.81
LIG3-210ENST00000588109 SRIP30626 198 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 CRYBA4P53673 196 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 RHOHQ15669 191 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 OR10J3Q5JRS4 329 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 UFSP1Q6NVU6 142 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 SLC25A29Q8N8R3 303 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 RPL39LQ96EH5 51 aaKnown RBP3.73□□□□□ -1.81
LIG3-210ENST00000588109 PRELID3AQ96N28 172 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 EDA2RQ9HAV5 297 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 PRO0255Q9UI72 69 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 TNFRSF18Q9Y5U5 241 aa3.73□□□□□ -1.81
LIG3-210ENST00000588109 TRBV10-1A0A0K0K1A3 114 aa3.72□□□□□ -1.81
LIG3-210ENST00000588109 GAGE12JA6NER3 117 aa3.72□□□□□ -1.81
LIG3-210ENST00000588109 C1orf196B1AJZ1 125 aa3.72□□□□□ -1.81
LIG3-210ENST00000588109 HSBP1L1C9JCN9 74 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms