RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	SLC25A29	Q8N8R3	303 aa		6.64	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	6.64	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	MRAP2	Q96G30	205 aa		6.64	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	DNAJC30	Q96LL9	226 aa		6.64	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	VPS13D	Q5THJ4	4388 aa		6.64	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	TRAV26-1	A0A087WT03	109 aa		6.63	□□□□□ -1.35
U2AF1L4-208	ENST00000587987		K7EQD1	137 aa		6.63	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	HLA-DQA1	P01909	254 aa		6.63	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	PPBP	P02775	128 aa		6.63	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	MRPL23	Q16540	153 aa	Known RBP	6.63	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	IGLL5	B9A064	214 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987		M0QY20	66 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	RPL36A	P83881	106 aa	Known RBP	6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	LGALS9C	Q6DKI2	356 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	SUMO4	Q6EEV6	95 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	TMEM88	Q6PEY1	159 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	TMEM136	Q6ZRR5	245 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	RPL36AL	Q969Q0	106 aa	Known RBP	6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	VSIG2	Q96IQ7	327 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	YPEL4	Q96NS1	127 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	NIT2	Q9NQR4	276 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	TNFRSF18	Q9Y5U5	241 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	ICOS	Q9Y6W8	199 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	NACA	E9PAV3	2078 aa		6.62	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	DYNC1H1	Q14204	4646 aa	Known RBP	6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	TRBV7-3	A0A075B6L6	115 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	TGIF2-C20orf24	A0A0A6YYL0	155 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987		A0A0J9YY99	117 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	APCS	P02743	223 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	GYPE	P15421	78 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	SRI	P30626	198 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	CKS2	P33552	79 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987		Q6ZSN1	163 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	CBLN2	Q8IUK8	224 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	AMN1	Q8IY45	258 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	RNF185	Q96GF1	192 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	LAMTOR2	Q9Y2Q5	125 aa		6.61	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	PHOX2A	O14813	284 aa		6.6	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	MRPL51	Q4U2R6	128 aa	Known RBP	6.6	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	TMEM97	Q5BJF2	176 aa		6.6	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	NEGR1	Q7Z3B1	354 aa		6.6	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	DAZ4	Q86SG3	579 aa	Known RBP	6.6	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	ORMDL3	Q8N138	153 aa		6.6	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	DAZ3	Q9NR90	486 aa	Known RBP	6.6	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	TRAPPC1	Q9Y5R8	145 aa		6.6	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	DNAH11	Q96DT5	4516 aa		6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	TRBV6-5	A0A0K0K1A5	114 aa		6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	NUDT3	O95989	172 aa		6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	FABP9	Q0Z7S8	132 aa		6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	OR10J3	Q5JRS4	329 aa		6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	NEXN-AS1	Q8NBZ9	246 aa		6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	ZNRF2	Q8NHG8	242 aa		6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	C20orf78	Q9BR46	151 aa		6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	MRPL18	Q9H0U6	180 aa	Known RBP	6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987	ST20	Q9HBF5	79 aa		6.59	□□□□□ -1.35
U2AF1L4-208	ENST00000587987		A0A096LPF7	62 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	TRAV26-2	A0A0B4J265	109 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	COLCA2	A8K830	154 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987		D6R8Y8	96 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	TCAP	O15273	167 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	TIRAP	P58753	221 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	UBE2D3	P61077	147 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	UBE2D2	P62837	147 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	ATP6V0E2	Q8NHE4	81 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	APLN	Q9ULZ1	77 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	DNAH17	Q9UFH2	4485 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	PKHD1	P08F94	4074 aa		6.58	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	GAGE12J	A6NER3	117 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	PRSS47	A8MTI9	375 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	VCY	O14598	125 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987		P0DMU3	169 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	FAM231A	P0DMU4	169 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	FAM231C	P0DMU5	169 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	RAB5A	P20339	215 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	RPS10	P46783	165 aa	Known RBP	6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	CCL18	P55774	89 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	RPL32	P62910	135 aa	Known RBP	6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	GAGE1	Q13065	139 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	GAGE4	Q13068	117 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	GAGE5	Q13069	117 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	GAGE13	Q4V321	117 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	PRELID3A	Q96N28	172 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	GTSF1L	Q9H1H1	148 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	FAT2	Q9NYQ8	4349 aa		6.57	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	LOC100131303	A0A0U1RQF7	123 aa		6.56	□□□□□ -1.36
U2AF1L4-208	ENST00000587987		I3L3M4	83 aa		6.56	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	SCO1	O75880	301 aa		6.56	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	TNFRSF6B	O95407	300 aa		6.56	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	NCR2	O95944	276 aa		6.56	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	LINC00694	P0DN24	101 aa		6.56	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	SUMO2	P61956	95 aa	Known RBP	6.56	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	LYPD5	Q6UWN5	251 aa		6.56	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	NRAC	Q8N912	160 aa		6.56	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	DNAH2	Q9P225	4427 aa		6.55	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	TRBV27	A0A0K0K1C4	114 aa		6.55	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	SDHAF1	A6NFY7	115 aa		6.55	□□□□□ -1.36
U2AF1L4-208	ENST00000587987		K7EMI3	77 aa		6.55	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	PMCH	P20382	165 aa		6.55	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	POLR2K	P53803	58 aa	Known RBP	6.55	□□□□□ -1.36
U2AF1L4-208	ENST00000587987	RPL39L	Q96EH5	51 aa	Known RBP	6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms