RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 RAB4BP61018 213 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 ADIRFQ15847 76 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 FAM74A4Q5TZK3 123 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 CFAP161Q6P656 301 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 LYZL1Q6UWQ5 148 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 TSKUQ8WUA8 353 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 GTSF1Q8WW33 167 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 UPK3BQ9BT76 320 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 LINC00588Q9Y4M8 146 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 SACSQ9NZJ4 4579 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 MUC21A0A0G2JKD1 596 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 MUC21A0A140T8X8 626 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 F5H697 171 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 LINC00694P0DN24 101 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 TIRAPP58753 221 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 PNRC1Q12796 327 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-204ENST00000586253 ESRGQ1W209 222 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 DGAT2L7PQ6IED9 249 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 Q6ZSN1 163 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 OR10G8Q8NGN5 311 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 MRPS16Q9Y3D3 137 aaKnown RBP5.53□□□□□ -1.52
SMAD4-204ENST00000586253 KIF25-AS1Q9Y6Z4 181 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 V9GYV3 84 aa5.53□□□□□ -1.52
SMAD4-204ENST00000586253 DNAH6Q9C0G6 4158 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 LOC100131303A0A0U1RQF7 123 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 LINC00862A6NCI5 91 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 HIGD1CA8MV81 97 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 TRIAP1O43715 76 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 NTF3P20783 257 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 SSTP61278 116 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 TWIST1Q15672 202 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 ZNF56Q15929 161 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 LYPD5Q6UWN5 251 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 Q8N1X5 172 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 C14orf178Q8N769 122 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-204ENST00000586253 ZNRF2Q8NHG8 242 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 BORCS7Q96B45 105 aa5.52□□□□□ -1.53
SMAD4-204ENST00000586253 A0A1B0GUT8 65 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 TMEM218A2RU14 115 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 PPP1R2P9O14990 202 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 EVI2AP22794 236 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 LINC00315P59091 139 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 SMIM15Q7Z3B0 74 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 COMMD7Q86VX2 200 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 PGLYRP4Q96LB8 373 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 DPH3P1Q9H4G8 78 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 MSRB1Q9NZV6 116 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 NAT8BQ9UHF3 227 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 VPS13DQ5THJ4 4388 aa5.51□□□□□ -1.53
SMAD4-204ENST00000586253 TRBV7-3A0A075B6L6 115 aa5.5□□□□□ -1.53
SMAD4-204ENST00000586253 SMIM27A0A1W2PRY6 76 aa5.5□□□□□ -1.53
SMAD4-204ENST00000586253 H7C1H1 209 aa5.5□□□□□ -1.53
SMAD4-204ENST00000586253 RPL36AP83881 106 aaKnown RBP5.5□□□□□ -1.53
SMAD4-204ENST00000586253 NUP35Q8NFH5 326 aa5.5□□□□□ -1.53
SMAD4-204ENST00000586253 ATP6V0E2Q8NHE4 81 aa5.5□□□□□ -1.53
SMAD4-204ENST00000586253 RPL36ALQ969Q0 106 aaKnown RBP5.5□□□□□ -1.53
SMAD4-204ENST00000586253 GTSF1LQ9H1H1 148 aa5.5□□□□□ -1.53
SMAD4-204ENST00000586253 Q9H8V8 135 aa5.5□□□□□ -1.53
SMAD4-204ENST00000586253 A0A087WWC5 75 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 GAGE12JA6NER3 117 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 F8W036 122 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 K7EP13 123 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 M0QY20 66 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 MT-ND4LP03901 98 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 MGPP08493 103 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 ADCYAP1P18509 176 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 GAGE1Q13065 139 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 GAGE4Q13068 117 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 GAGE5Q13069 117 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 RIGQ13278 110 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 TTC32Q5I0X7 151 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 LELP1Q5T871 98 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 Q6ZR54 194 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 FRZBQ92765 325 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 DNAJC30Q96LL9 226 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 SEC11CQ9BY50 192 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 Q9UF83 564 aa5.49□□□□□ -1.53
SMAD4-204ENST00000586253 TRAV8-6A0A0B4J262 113 aa5.48□□□□□ -1.53
SMAD4-204ENST00000586253 NBDYA0A0U1RRE5 68 aa5.48□□□□□ -1.53
SMAD4-204ENST00000586253 A0A1B0GW15 77 aa5.48□□□□□ -1.53
SMAD4-204ENST00000586253 SIVA1O15304 175 aa5.48□□□□□ -1.53
SMAD4-204ENST00000586253 UBE2D3P61077 147 aa5.48□□□□□ -1.53
SMAD4-204ENST00000586253 UBE2D2P62837 147 aa5.48□□□□□ -1.53
SMAD4-204ENST00000586253 SUMO4Q6EEV6 95 aa5.48□□□□□ -1.53
SMAD4-204ENST00000586253 DAZ4Q86SG3 579 aaKnown RBP5.48□□□□□ -1.53
SMAD4-204ENST00000586253 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.48□□□□□ -1.53
SMAD4-204ENST00000586253 NEXN-AS1Q8NBZ9 246 aa5.48□□□□□ -1.53
SMAD4-204ENST00000586253 TMEM191AQ9H0A3 160 aa5.48□□□□□ -1.53
SMAD4-204ENST00000586253 DAZ3Q9NR90 486 aaKnown RBP5.48□□□□□ -1.53
SMAD4-204ENST00000586253 HYDINQ4G0P3 5121 aa5.47□□□□□ -1.53
SMAD4-204ENST00000586253 IGLV2-18A0A075B6J9 118 aa5.47□□□□□ -1.53
SMAD4-204ENST00000586253 SLPIP03973 132 aa5.47□□□□□ -1.53
SMAD4-204ENST00000586253 DNAH10OSP0CZ25 163 aa5.47□□□□□ -1.53
SMAD4-204ENST00000586253 TMEM97Q5BJF2 176 aa5.47□□□□□ -1.53
SMAD4-204ENST00000586253 C10orf91Q5T1B1 145 aa5.47□□□□□ -1.53
SMAD4-204ENST00000586253 RASL11AQ6T310 242 aa5.47□□□□□ -1.53
SMAD4-204ENST00000586253 NIT2Q9NQR4 276 aa5.47□□□□□ -1.53
SMAD4-204ENST00000586253 CARHSP1Q9Y2V2 147 aaKnown RBP5.47□□□□□ -1.53
SMAD4-204ENST00000586253 RYR2Q92736 4967 aa5.47□□□□□ -1.53
SMAD4-204ENST00000586253 RYR3Q15413 4870 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms