RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 GIG44P09565 113 aaPredicted RBP7.52□□□□□ -1.21
LIG3-203ENST00000585370 PKIAP61925 76 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 DAZ2Q13117 558 aaKnown RBP7.52□□□□□ -1.21
LIG3-203ENST00000585370 SUMO4Q6EEV6 95 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 ZFP2Q6ZN57 461 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 ZNF705AQ6ZN79 300 aaPredicted RBP7.52□□□□□ -1.21
LIG3-203ENST00000585370 TEX43Q6ZNM6 134 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 KIR2DL5AQ8N109 375 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 CSNK1G2-AS1Q8NCQ2 148 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 KIR2DL5BQ8NHK3 375 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 JPT2Q9H910 190 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 HUWE1Q7Z6Z7 4374 aaKnown RBP7.52□□□□□ -1.21
LIG3-203ENST00000585370 STAB2Q8WWQ8 2551 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 IGHV3OR16-12A0A075B7B8 117 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 SMIM9A6NGZ8 99 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 TSTD3H0UI37 97 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 M0QY20 66 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 RS1O15537 224 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 ATP5LO75964 103 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 POLR2KP53803 58 aaKnown RBP7.51□□□□□ -1.21
LIG3-203ENST00000585370 ZNF56Q15929 161 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 RRN3P1Q2M238 152 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 FAM74A4Q5TZK3 123 aa7.51□□□□□ -1.21
LIG3-203ENST00000585370 RNASE8Q8TDE3 154 aaKnown RBP7.51□□□□□ -1.21
LIG3-203ENST00000585370 A0A096LNJ9 63 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 AZU1P20160 251 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 APOC4P55056 127 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 Q8N976 141 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 IL17DQ8TAD2 202 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 IFI27L1Q96BM0 104 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 B9D2Q9BPU9 175 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 OVOL2Q9BRP0 275 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 WFDC10AQ9H1F0 79 aa7.5□□□□□ -1.21
LIG3-203ENST00000585370 DNAH7Q8WXX0 4024 aa7.49□□□□□ -1.21
LIG3-203ENST00000585370 TRBV27A0A0K0K1C4 114 aa7.49□□□□□ -1.21
LIG3-203ENST00000585370 NUDT3O95989 172 aa7.49□□□□□ -1.21
LIG3-203ENST00000585370 CFAP126Q5VTH2 177 aa7.49□□□□□ -1.21
LIG3-203ENST00000585370 UFSP1Q6NVU6 142 aa7.49□□□□□ -1.21
LIG3-203ENST00000585370 RPL39LQ96EH5 51 aaKnown RBP7.49□□□□□ -1.21
LIG3-203ENST00000585370 VAMP8Q9BV40 100 aa7.49□□□□□ -1.21
LIG3-203ENST00000585370 SDHAF1A6NFY7 115 aa7.48□□□□□ -1.21
LIG3-203ENST00000585370 PCP4L1A6NKN8 68 aa7.48□□□□□ -1.21
LIG3-203ENST00000585370 IGHV3-53P01767 116 aa7.48□□□□□ -1.21
LIG3-203ENST00000585370 LINC01545Q5VT33 79 aa7.48□□□□□ -1.21
LIG3-203ENST00000585370 LGALS9CQ6DKI2 356 aa7.48□□□□□ -1.21
LIG3-203ENST00000585370 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
LIG3-203ENST00000585370 ZNF664Q8N3J9 261 aa7.48□□□□□ -1.21
LIG3-203ENST00000585370 OR4C5Q8NGB2 326 aa7.48□□□□□ -1.21
LIG3-203ENST00000585370 WWC2-AS2Q96NR7 200 aa7.48□□□□□ -1.21
LIG3-203ENST00000585370 TRAV9-2A0A087WT02 112 aa7.47□□□□□ -1.21
LIG3-203ENST00000585370 TRGV1A0A0A0MS02 117 aa7.47□□□□□ -1.21
LIG3-203ENST00000585370 TRAV4A0A0B4J268 109 aa7.47□□□□□ -1.21
LIG3-203ENST00000585370 I3L3M4 83 aa7.47□□□□□ -1.21
LIG3-203ENST00000585370 PRM2P04554 102 aa7.47□□□□□ -1.21
LIG3-203ENST00000585370 RHOHQ15669 191 aa7.47□□□□□ -1.21
LIG3-203ENST00000585370 LINC00173Q6ZV60 143 aa7.47□□□□□ -1.21
LIG3-203ENST00000585370 TOMM6Q96B49 74 aa7.47□□□□□ -1.21
LIG3-203ENST00000585370 MRPL16Q9NX20 251 aaKnown RBP7.47□□□□□ -1.21
LIG3-203ENST00000585370 TNFRSF18Q9Y5U5 241 aa7.47□□□□□ -1.21
LIG3-203ENST00000585370 SACSQ9NZJ4 4579 aa7.46□□□□□ -1.21
LIG3-203ENST00000585370 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.22
LIG3-203ENST00000585370 HSBP1L1C9JCN9 74 aa7.46□□□□□ -1.22
LIG3-203ENST00000585370 DYNC2H1Q8NCM8 4307 aaKnown RBP7.46□□□□□ -1.22
LIG3-203ENST00000585370 A8MZ25 164 aa7.45□□□□□ -1.22
LIG3-203ENST00000585370 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.45□□□□□ -1.22
LIG3-203ENST00000585370 PRSS1P07477 247 aa7.45□□□□□ -1.22
LIG3-203ENST00000585370 SCGB3A1Q96QR1 104 aa7.45□□□□□ -1.22
LIG3-203ENST00000585370 NOP10Q9NPE3 64 aaKnown RBP7.45□□□□□ -1.22
LIG3-203ENST00000585370 CYSLTR1Q9Y271 337 aa7.45□□□□□ -1.22
LIG3-203ENST00000585370 PLAC8L1A1L4L8 177 aa7.44□□□□□ -1.22
LIG3-203ENST00000585370 NHLRC4P0CG21 123 aaPredicted RBP7.44□□□□□ -1.22
LIG3-203ENST00000585370 C2orf66Q6UXQ4 117 aa7.44□□□□□ -1.22
LIG3-203ENST00000585370 Q6ZN92 141 aa7.44□□□□□ -1.22
LIG3-203ENST00000585370 ERASQ7Z444 233 aa7.44□□□□□ -1.22
LIG3-203ENST00000585370 TMEM141Q96I45 108 aa7.44□□□□□ -1.22
LIG3-203ENST00000585370 C18orf15Q96N68 181 aa7.44□□□□□ -1.22
LIG3-203ENST00000585370 TRGV2A0A075B6R0 118 aa7.43□□□□□ -1.22
LIG3-203ENST00000585370 IGHV3-73A0A0B4J1V6 119 aa7.43□□□□□ -1.22
LIG3-203ENST00000585370 TRAV12-1A0A0B4J245 112 aa7.43□□□□□ -1.22
LIG3-203ENST00000585370 SPATA45Q537H7 98 aa7.43□□□□□ -1.22
LIG3-203ENST00000585370 Q6ZTI0 123 aa7.43□□□□□ -1.22
LIG3-203ENST00000585370 PRO1933Q9H354 126 aa7.43□□□□□ -1.22
LIG3-203ENST00000585370 ZMAT4Q9H898 229 aa7.43□□□□□ -1.22
LIG3-203ENST00000585370 PAM16Q9Y3D7 125 aa7.43□□□□□ -1.22
LIG3-203ENST00000585370 TENM2Q9NT68 2774 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 LYRM9A8MSI8 78 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 NPSP0C0P6 89 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 DDTP30046 118 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 RPL36AP83881 106 aaKnown RBP7.42□□□□□ -1.22
LIG3-203ENST00000585370 PAPPA-AS1Q5QFB9 102 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 LINC00612Q8N6U2 182 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 RPL36ALQ969Q0 106 aaKnown RBP7.42□□□□□ -1.22
LIG3-203ENST00000585370 TIMM17AQ99595 171 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 MIEN1Q9BRT3 115 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 X6R8D5 127 aa7.42□□□□□ -1.22
LIG3-203ENST00000585370 RYR2Q92736 4967 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 CSMD3Q7Z407 3707 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms