RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 Q6ZSN1 163 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 FAM19A2Q8N3H0 131 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 OR4C5Q8NGB2 326 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 OR10D4PQ8NGN7 298 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
UBBP4-202ENST00000584755 IGHV4-28A0A0C4DH34 117 aa9.97□□□□□ -0.81
UBBP4-202ENST00000584755 LYRM9A8MSI8 78 aa9.97□□□□□ -0.81
UBBP4-202ENST00000584755 AKR1D1P51857 326 aa9.97□□□□□ -0.81
UBBP4-202ENST00000584755 ZNF479Q96JC4 524 aa9.97□□□□□ -0.81
UBBP4-202ENST00000584755 ST20Q9HBF5 79 aa9.97□□□□□ -0.81
UBBP4-202ENST00000584755 A0A096LNJ9 63 aa9.96□□□□□ -0.82
UBBP4-202ENST00000584755 IGHV3-73A0A0B4J1V6 119 aa9.96□□□□□ -0.82
UBBP4-202ENST00000584755 GAGE12BA1L429 117 aa9.96□□□□□ -0.82
UBBP4-202ENST00000584755 K7EMI3 77 aa9.96□□□□□ -0.82
UBBP4-202ENST00000584755 GAGE7O76087 117 aa9.96□□□□□ -0.82
UBBP4-202ENST00000584755 GAGE12FP0CL80 117 aa9.96□□□□□ -0.82
UBBP4-202ENST00000584755 GAGE12GP0CL81 117 aa9.96□□□□□ -0.82
UBBP4-202ENST00000584755 GAGE12IP0CL82 117 aa9.96□□□□□ -0.82
UBBP4-202ENST00000584755 TMEM70Q9BUB7 260 aa9.96□□□□□ -0.82
UBBP4-202ENST00000584755 K7EIL1 84 aa9.95□□□□□ -0.82
UBBP4-202ENST00000584755 EMP1P54849 157 aa9.95□□□□□ -0.82
UBBP4-202ENST00000584755 TRGV2A0A075B6R0 118 aa9.94□□□□□ -0.82
UBBP4-202ENST00000584755 TRBV27A0A0K0K1C4 114 aa9.94□□□□□ -0.82
UBBP4-202ENST00000584755 SDHAF1A6NFY7 115 aa9.94□□□□□ -0.82
UBBP4-202ENST00000584755 PMCHL1Q16048 86 aa9.94□□□□□ -0.82
UBBP4-202ENST00000584755 PCP4L1A6NKN8 68 aa9.93□□□□□ -0.82
UBBP4-202ENST00000584755 DNAJC30Q96LL9 226 aa9.93□□□□□ -0.82
UBBP4-202ENST00000584755 DKK2Q9UBU2 259 aa9.93□□□□□ -0.82
UBBP4-202ENST00000584755 VCYO14598 125 aa9.92□□□□□ -0.82
UBBP4-202ENST00000584755 HBDP02042 147 aa9.92□□□□□ -0.82
UBBP4-202ENST00000584755 P0DMU3 169 aa9.92□□□□□ -0.82
UBBP4-202ENST00000584755 FAM231AP0DMU4 169 aa9.92□□□□□ -0.82
UBBP4-202ENST00000584755 FAM231CP0DMU5 169 aa9.92□□□□□ -0.82
UBBP4-202ENST00000584755 FCER1GP30273 86 aa9.92□□□□□ -0.82
UBBP4-202ENST00000584755 LAGE3Q14657 143 aa9.92□□□□□ -0.82
UBBP4-202ENST00000584755 FAM222AQ5U5X8 452 aa9.92□□□□□ -0.82
UBBP4-202ENST00000584755 NEXN-AS1Q8NBZ9 246 aa9.92□□□□□ -0.82
UBBP4-202ENST00000584755 TRBV10-1A0A0K0K1A3 114 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 LEPROTL1O95214 131 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 PRB2P02812 416 aaPredicted RBP9.91□□□□□ -0.82
UBBP4-202ENST00000584755 BTF3P20290 206 aaKnown RBP9.91□□□□□ -0.82
UBBP4-202ENST00000584755 FHL2Q14192 279 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 K7EQD1 137 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 TCAPO15273 167 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 SMIM6P0DI80 62 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 JOSD1Q15040 202 aaPredicted RBP9.91□□□□□ -0.82
UBBP4-202ENST00000584755 ORMDL2Q53FV1 153 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 PYY3Q5JQD4 70 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 Q9UF83 564 aa9.91□□□□□ -0.82
UBBP4-202ENST00000584755 DEFB4AO15263 64 aa9.9□□□□□ -0.83
UBBP4-202ENST00000584755 DEFB130BP0DP73 79 aa9.9□□□□□ -0.83
UBBP4-202ENST00000584755 DEFB130AP0DP74 79 aa9.9□□□□□ -0.83
UBBP4-202ENST00000584755 NEGR1Q7Z3B1 354 aa9.9□□□□□ -0.83
UBBP4-202ENST00000584755 SBSPONQ8IVN8 264 aa9.9□□□□□ -0.83
UBBP4-202ENST00000584755 SLC25A29Q8N8R3 303 aa9.9□□□□□ -0.83
UBBP4-202ENST00000584755 RETNQ9HD89 108 aa9.9□□□□□ -0.83
UBBP4-202ENST00000584755 TEX48A0A1B0GUV7 120 aa9.89□□□□□ -0.83
UBBP4-202ENST00000584755 I3L3M4 83 aa9.89□□□□□ -0.83
UBBP4-202ENST00000584755 SPART-AS1P0CW21 52 aa9.89□□□□□ -0.83
UBBP4-202ENST00000584755 LINC00173Q6ZV60 143 aa9.89□□□□□ -0.83
UBBP4-202ENST00000584755 KIR2DL4Q99706 377 aa9.89□□□□□ -0.83
UBBP4-202ENST00000584755 C11orf68Q9H3H3 251 aaKnown RBP9.89□□□□□ -0.83
UBBP4-202ENST00000584755 HSPB8Q9UJY1 196 aa9.89□□□□□ -0.83
UBBP4-202ENST00000584755 CELA1Q9UNI1 258 aa9.89□□□□□ -0.83
UBBP4-202ENST00000584755 TNFRSF18Q9Y5U5 241 aa9.89□□□□□ -0.83
UBBP4-202ENST00000584755 DNHD1Q96M86 4753 aa9.88□□□□□ -0.83
UBBP4-202ENST00000584755 TRBV7-3A0A075B6L6 115 aa9.88□□□□□ -0.83
UBBP4-202ENST00000584755 C3orf79P0CE67 100 aa9.88□□□□□ -0.83
UBBP4-202ENST00000584755 TM2D3Q9BRN9 247 aa9.88□□□□□ -0.83
UBBP4-202ENST00000584755 TRGV4A0A0C4DH28 118 aa9.87□□□□□ -0.83
UBBP4-202ENST00000584755 TSHBP01222 138 aa9.87□□□□□ -0.83
UBBP4-202ENST00000584755 RHOHQ15669 191 aa9.87□□□□□ -0.83
UBBP4-202ENST00000584755 C12orf57Q99622 126 aa9.87□□□□□ -0.83
UBBP4-202ENST00000584755 NUDT3O95989 172 aa9.86□□□□□ -0.83
UBBP4-202ENST00000584755 G0S2P27469 103 aa9.86□□□□□ -0.83
UBBP4-202ENST00000584755 KRTDAPP60985 99 aa9.86□□□□□ -0.83
UBBP4-202ENST00000584755 DAD1P61803 113 aa9.86□□□□□ -0.83
UBBP4-202ENST00000584755 RPL36AP83881 106 aaKnown RBP9.86□□□□□ -0.83
UBBP4-202ENST00000584755 Q8N976 141 aa9.86□□□□□ -0.83
UBBP4-202ENST00000584755 RPL36ALQ969Q0 106 aaKnown RBP9.86□□□□□ -0.83
UBBP4-202ENST00000584755 TOMM6Q96B49 74 aa9.86□□□□□ -0.83
UBBP4-202ENST00000584755 SPATA25Q9BR10 227 aa9.86□□□□□ -0.83
UBBP4-202ENST00000584755 LINC01549A6NIU2 74 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 LINC00694P0DN24 101 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 UBE2D3P61077 147 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 UBE2D2P62837 147 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 ZNRF2Q8NHG8 242 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 HHLA3Q9XRX5 114 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 SYS1-DBNDD2H3BUS1 97 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 CRYBA4P53673 196 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 DEFB121Q5J5C9 76 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 SPATA12Q7Z6I5 190 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 PRADC1Q9BSG0 188 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 MAP1LC3CQ9BXW4 147 aa9.85□□□□□ -0.83
UBBP4-202ENST00000584755 TENM3Q9P273 2699 aa9.84□□□□□ -0.83
UBBP4-202ENST00000584755 ATP5G1P05496 136 aa9.84□□□□□ -0.83
UBBP4-202ENST00000584755 C2orf66Q6UXQ4 117 aa9.84□□□□□ -0.83
UBBP4-202ENST00000584755 DAZ4Q86SG3 579 aaKnown RBP9.84□□□□□ -0.83
UBBP4-202ENST00000584755 IFI27L1Q96BM0 104 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms