RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 HIST1H2BAQ96A08 127 aa5.33□□□□□ -1.56
SRSF1-207ENST00000584668 ZFP30Q9Y2G7 519 aa5.33□□□□□ -1.56
SRSF1-207ENST00000584668 IGKV2-24A0A0C4DH68 120 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 TRBV6-1A0A0K0K1D8 114 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 GRIFINA4D1Z8 144 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 H7C1H1 209 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 PEX7O00628 323 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 UBE2L6O14933 153 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 SH2D1AO60880 128 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 SIX6O95475 246 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 LINC01559Q495D7 138 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 STPG4Q8N801 248 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 RAB24Q969Q5 203 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 FMC1Q96HJ9 113 aa5.32□□□□□ -1.56
SRSF1-207ENST00000584668 ZNF471Q9BX82 626 aaPredicted RBP5.32□□□□□ -1.56
SRSF1-207ENST00000584668 ACTR3CQ9C0K3 210 aaPredicted RBP5.32□□□□□ -1.56
SRSF1-207ENST00000584668 TMSB15BA0A087X1C1 80 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 TRAV34A0A0B4J273 112 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 H0YIZ8 118 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 MPC2O95563 127 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 RPS10P46783 165 aaKnown RBP5.31□□□□□ -1.56
SRSF1-207ENST00000584668 SULT1A2P50226 295 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 SERF2P84101 59 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 COX6A2Q02221 97 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 IQCJQ1A5X6 159 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 SPANXN1Q5VSR9 72 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 Q6ZRP5 223 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 AP1S3Q96PC3 154 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 TCEAL7Q9BRU2 100 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 PSMG3Q9BT73 122 aaPredicted RBP5.31□□□□□ -1.56
SRSF1-207ENST00000584668 VAX2Q9UIW0 290 aa5.31□□□□□ -1.56
SRSF1-207ENST00000584668 TRAV26-2A0A0B4J265 109 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 A0A1B0GUV1 79 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 SSNA1O43805 119 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 PRR27Q6MZM9 219 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 KRTAP26-1Q6PEX3 210 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 ZNF664Q8N3J9 261 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 LYPD6BQ8NI32 183 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 AQP10Q96PS8 301 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 TMEM243Q9BU79 118 aa5.3□□□□□ -1.56
SRSF1-207ENST00000584668 CXCL1P09341 107 aa5.29□□□□□ -1.56
SRSF1-207ENST00000584668 ZNF674Q2M3X9 581 aa5.29□□□□□ -1.56
SRSF1-207ENST00000584668 COX8CQ7Z4L0 72 aa5.29□□□□□ -1.56
SRSF1-207ENST00000584668 TNFSF18Q9UNG2 199 aa5.29□□□□□ -1.56
SRSF1-207ENST00000584668 RAB5CP51148 216 aa5.28□□□□□ -1.56
SRSF1-207ENST00000584668 H2BFSP57053 126 aa5.28□□□□□ -1.56
SRSF1-207ENST00000584668 UBE2G2P60604 165 aa5.28□□□□□ -1.56
SRSF1-207ENST00000584668 NTM-AS1Q6ZSK4 140 aa5.28□□□□□ -1.56
SRSF1-207ENST00000584668 STOML3Q8TAV4 291 aa5.28□□□□□ -1.56
SRSF1-207ENST00000584668 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
SRSF1-207ENST00000584668 CTXND1A0A1B0GTU2 59 aa5.27□□□□□ -1.57
SRSF1-207ENST00000584668 ATP6V0CP27449 155 aa5.27□□□□□ -1.57
SRSF1-207ENST00000584668 AKR1C3P42330 323 aa5.27□□□□□ -1.57
SRSF1-207ENST00000584668 CACNG7P62955 275 aa5.27□□□□□ -1.57
SRSF1-207ENST00000584668 C20orf203Q8NBC4 194 aa5.27□□□□□ -1.57
SRSF1-207ENST00000584668 OR10AG1Q8NH19 301 aa5.27□□□□□ -1.57
SRSF1-207ENST00000584668 WFDC1Q9HC57 220 aa5.27□□□□□ -1.57
SRSF1-207ENST00000584668 NDUFA13Q9P0J0 144 aa5.27□□□□□ -1.57
SRSF1-207ENST00000584668 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
SRSF1-207ENST00000584668 LPAP08519 4548 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 GAGE12HA6NDE8 117 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 FAM74A7A6NL05 159 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 INMT-MINDY4F8WBC2 141 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 LTAP01374 205 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 SLPIP03973 132 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 S100A9P06702 114 aaKnown RBP5.26□□□□□ -1.57
SRSF1-207ENST00000584668 MGPP08493 103 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 OR5AL1P0C617 328 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 CRIP1P50238 77 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 HIGD2BQ4VC39 106 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 C15orf56Q8N910 161 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 PRSS3P2Q8NHM4 247 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 PGLYRP4Q96LB8 373 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 MED28Q9H204 178 aa5.26□□□□□ -1.57
SRSF1-207ENST00000584668 A0A096LNI7 61 aa5.25□□□□□ -1.57
SRSF1-207ENST00000584668 GVQW2A0A096LPI5 108 aaPredicted RBP5.25□□□□□ -1.57
SRSF1-207ENST00000584668 BORCS7-ASMTA0A0B4J1R7 106 aa5.25□□□□□ -1.57
SRSF1-207ENST00000584668 IGKV3OR2-268A0A0C4DH90 116 aa5.25□□□□□ -1.57
SRSF1-207ENST00000584668 SNAI2O43623 268 aa5.25□□□□□ -1.57
SRSF1-207ENST00000584668 AMTP48728 403 aa5.25□□□□□ -1.57
SRSF1-207ENST00000584668 COTL1Q14019 142 aa5.25□□□□□ -1.57
SRSF1-207ENST00000584668 AMMECR1LQ6DCA0 310 aa5.25□□□□□ -1.57
SRSF1-207ENST00000584668 S100ZQ8WXG8 99 aa5.25□□□□□ -1.57
SRSF1-207ENST00000584668 CARD19Q96LW7 228 aa5.25□□□□□ -1.57
SRSF1-207ENST00000584668 IGLV4-60A0A075B6I1 120 aa5.24□□□□□ -1.57
SRSF1-207ENST00000584668 MT-ND6P03923 174 aa5.24□□□□□ -1.57
SRSF1-207ENST00000584668 FHITP49789 147 aa5.24□□□□□ -1.57
SRSF1-207ENST00000584668 SRSF9Q13242 221 aaKnown RBP eCLIP5.24□□□□□ -1.571e-9■□□□□ 11.3
SRSF1-207ENST00000584668 AKR1C8PQ5T2L2 129 aa5.24□□□□□ -1.57
SRSF1-207ENST00000584668 CST9LP1Q5W188 147 aa5.24□□□□□ -1.57
SRSF1-207ENST00000584668 ISOC2Q96AB3 205 aa5.24□□□□□ -1.57
SRSF1-207ENST00000584668 MUC2Q02817 5179 aa5.24□□□□□ -1.57
SRSF1-207ENST00000584668 MUC21A0A0G2JKD1 596 aa5.23□□□□□ -1.57
SRSF1-207ENST00000584668 PFDN1O60925 122 aa5.23□□□□□ -1.57
SRSF1-207ENST00000584668 NKX2-5P52952 324 aaPredicted RBP5.23□□□□□ -1.57
SRSF1-207ENST00000584668 SSTP61278 116 aa5.23□□□□□ -1.57
SRSF1-207ENST00000584668 RASL11AQ6T310 242 aa5.23□□□□□ -1.57
SRSF1-207ENST00000584668 LINC00299Q6ZSB3 139 aa5.23□□□□□ -1.57
SRSF1-207ENST00000584668 CHCHD10Q8WYQ3 142 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms