RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 GRIFINA4D1Z8 144 aa6.81□□□□□ -1.32
CASC3-208ENST00000583649 GAGE12HA6NDE8 117 aa6.81□□□□□ -1.32
CASC3-208ENST00000583649 FAM162BQ5T6X4 162 aa6.81□□□□□ -1.32
CASC3-208ENST00000583649 PRR27Q6MZM9 219 aa6.81□□□□□ -1.32
CASC3-208ENST00000583649 NTM-AS1Q6ZSK4 140 aa6.81□□□□□ -1.32
CASC3-208ENST00000583649 TMEM243Q9BU79 118 aa6.81□□□□□ -1.32
CASC3-208ENST00000583649 TMEM167BQ9NRX6 74 aa6.81□□□□□ -1.32
CASC3-208ENST00000583649 ARL2-SNX15V9GYD0 113 aa6.81□□□□□ -1.32
CASC3-208ENST00000583649 GVQW2A0A096LPI5 108 aaPredicted RBP6.8□□□□□ -1.32
CASC3-208ENST00000583649 ARL14EPLP0DKL9 152 aa6.8□□□□□ -1.32
CASC3-208ENST00000583649 IL15RAQ13261 267 aa6.8□□□□□ -1.32
CASC3-208ENST00000583649 C15orf56Q8N910 161 aa6.8□□□□□ -1.32
CASC3-208ENST00000583649 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
CASC3-208ENST00000583649 INO80EQ8NBZ0 244 aaPredicted RBP6.8□□□□□ -1.32
CASC3-208ENST00000583649 ZNF471Q9BX82 626 aaPredicted RBP6.8□□□□□ -1.32
CASC3-208ENST00000583649 HMGB3O15347 200 aaKnown RBP6.79□□□□□ -1.32
CASC3-208ENST00000583649 CYCSP99999 105 aaKnown RBP6.79□□□□□ -1.32
CASC3-208ENST00000583649 C1orf137Q5JT78 98 aa6.79□□□□□ -1.32
CASC3-208ENST00000583649 CRCT1Q9UGL9 99 aa6.79□□□□□ -1.32
CASC3-208ENST00000583649 ZFP30Q9Y2G7 519 aa6.79□□□□□ -1.32
CASC3-208ENST00000583649 TRAV34A0A0B4J273 112 aa6.78□□□□□ -1.32
CASC3-208ENST00000583649 EIF3GO75821 320 aaKnown RBP eCLIP6.78□□□□□ -1.32
CASC3-208ENST00000583649 PET100P0DJ07 73 aa6.78□□□□□ -1.32
CASC3-208ENST00000583649 CDC34P49427 236 aaPredicted RBP6.78□□□□□ -1.32
CASC3-208ENST00000583649 ZNF674Q2M3X9 581 aa6.78□□□□□ -1.32
CASC3-208ENST00000583649 LRRC37A5PQ49AS3 106 aa6.78□□□□□ -1.32
CASC3-208ENST00000583649 TSKUQ8WUA8 353 aa6.78□□□□□ -1.32
CASC3-208ENST00000583649 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
CASC3-208ENST00000583649 TMSB15BA0A087X1C1 80 aa6.77□□□□□ -1.33
CASC3-208ENST00000583649 SH2D1AO60880 128 aa6.77□□□□□ -1.33
CASC3-208ENST00000583649 CXorf1O96002 111 aa6.77□□□□□ -1.33
CASC3-208ENST00000583649 GCHFRP30047 84 aa6.77□□□□□ -1.33
CASC3-208ENST00000583649 EIF5AP63241 154 aaKnown RBP6.77□□□□□ -1.33
CASC3-208ENST00000583649 LINC01559Q495D7 138 aa6.77□□□□□ -1.33
CASC3-208ENST00000583649 SPANXN1Q5VSR9 72 aa6.77□□□□□ -1.33
CASC3-208ENST00000583649 SUN5Q8TC36 379 aa6.77□□□□□ -1.33
CASC3-208ENST00000583649 ISOC2Q96AB3 205 aa6.77□□□□□ -1.33
CASC3-208ENST00000583649 SEC22CQ9BRL7 303 aa6.77□□□□□ -1.33
CASC3-208ENST00000583649 IGLV4-60A0A075B6I1 120 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 IGKV3OR2-268A0A0C4DH90 116 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 STAG3L2P0CL84 134 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 STAG3L3P0CL85 134 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 BTCP35070 178 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 HIST1H2BAQ96A08 127 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 NKX6-2Q9C056 277 aaPredicted RBP6.76□□□□□ -1.33
CASC3-208ENST00000583649 GFRA4Q9GZZ7 299 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 NUDT15Q9NV35 164 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
CASC3-208ENST00000583649 LOC107984640A0A0U1RRK4 108 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 A0A1W2PRE2 83 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 H0Y9J4 135 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 MBP02144 154 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 UBE2G1P62253 170 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 LCE2DQ5TA82 110 aaPredicted RBP6.75□□□□□ -1.33
CASC3-208ENST00000583649 Q86TA4 180 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 AP1S3Q96PC3 154 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 MLST8Q9BVC4 326 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 HSPB11Q9Y547 144 aa6.75□□□□□ -1.33
CASC3-208ENST00000583649 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 PEX7O00628 323 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 LYRM1O43325 122 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 IGLV7-43P04211 117 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 H2AFB2P0C5Z0 115 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 FGF6P10767 208 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 RPL12P30050 165 aaKnown RBP6.74□□□□□ -1.33
CASC3-208ENST00000583649 AMTP48728 403 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 GAGE2BQ13066 116 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 AMMECR1LQ6DCA0 310 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 CHCHD10Q8WYQ3 142 aaPredicted RBP6.74□□□□□ -1.33
CASC3-208ENST00000583649 FMC1Q96HJ9 113 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 SMIM3Q9BZL3 60 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 MED28Q9H204 178 aa6.74□□□□□ -1.33
CASC3-208ENST00000583649 CRIP1P50238 77 aa6.73□□□□□ -1.33
CASC3-208ENST00000583649 SYCNQ0VAF6 134 aa6.73□□□□□ -1.33
CASC3-208ENST00000583649 COTL1Q14019 142 aa6.73□□□□□ -1.33
CASC3-208ENST00000583649 COX8CQ7Z4L0 72 aa6.73□□□□□ -1.33
CASC3-208ENST00000583649 RAB24Q969Q5 203 aa6.73□□□□□ -1.33
CASC3-208ENST00000583649 PGLYRP4Q96LB8 373 aa6.73□□□□□ -1.33
CASC3-208ENST00000583649 CCDC160A6NGH7 325 aa6.72□□□□□ -1.33
CASC3-208ENST00000583649 CXCL1P09341 107 aa6.72□□□□□ -1.33
CASC3-208ENST00000583649 IL7P13232 177 aa6.72□□□□□ -1.33
CASC3-208ENST00000583649 OR10AG1Q8NH19 301 aa6.72□□□□□ -1.33
CASC3-208ENST00000583649 SDHCQ99643 169 aaPredicted RBP6.72□□□□□ -1.33
CASC3-208ENST00000583649 ACTR3CQ9C0K3 210 aaPredicted RBP6.72□□□□□ -1.33
CASC3-208ENST00000583649 A0A087WZ39 114 aa6.71□□□□□ -1.34
CASC3-208ENST00000583649 LINC01547P58512 204 aaPredicted RBP6.71□□□□□ -1.34
CASC3-208ENST00000583649 CDIP1Q9H305 208 aa6.71□□□□□ -1.34
CASC3-208ENST00000583649 CARHSP1Q9Y2V2 147 aaKnown RBP6.71□□□□□ -1.34
CASC3-208ENST00000583649 MGPP08493 103 aa6.7□□□□□ -1.34
CASC3-208ENST00000583649 OR5AL1P0C617 328 aa6.7□□□□□ -1.34
CASC3-208ENST00000583649 NKX2-5P52952 324 aaPredicted RBP6.7□□□□□ -1.34
CASC3-208ENST00000583649 C9orf116Q5BN46 136 aaPredicted RBP6.7□□□□□ -1.34
CASC3-208ENST00000583649 CCDC32Q9BV29 185 aa6.7□□□□□ -1.34
CASC3-208ENST00000583649 FAM240BA0A1B0GVZ2 78 aa6.69□□□□□ -1.34
CASC3-208ENST00000583649 M0QY20 66 aa6.69□□□□□ -1.34
CASC3-208ENST00000583649 TSPAN13O95857 204 aa6.69□□□□□ -1.34
CASC3-208ENST00000583649 CAMPP49913 170 aa6.69□□□□□ -1.34
CASC3-208ENST00000583649 SSTP61278 116 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms