RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 RHOHQ15669 191 aa8.44□□□□□ -1.06
CCDC57-216ENST00000582885 C20orf78Q9BR46 151 aa8.44□□□□□ -1.06
CCDC57-216ENST00000582885 PRADC1Q9BSG0 188 aa8.44□□□□□ -1.06
CCDC57-216ENST00000582885 TGP01266 2768 aa8.43□□□□□ -1.06
CCDC57-216ENST00000582885 TRAV10A0A0B4J240 114 aa8.43□□□□□ -1.06
CCDC57-216ENST00000582885 F5H768 121 aa8.43□□□□□ -1.06
CCDC57-216ENST00000582885 NPYP01303 97 aa8.43□□□□□ -1.06
CCDC57-216ENST00000582885 RPL32P62910 135 aaKnown RBP8.43□□□□□ -1.06
CCDC57-216ENST00000582885 OR10J3Q5JRS4 329 aa8.43□□□□□ -1.06
CCDC57-216ENST00000582885 RPL39LQ96EH5 51 aaKnown RBP8.43□□□□□ -1.06
CCDC57-216ENST00000582885 TRBV7-3A0A075B6L6 115 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 DEFB131BA0A096LNP1 70 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 PAX4O43316 350 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST1H2BKO60814 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST1H2BJP06899 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST1H2BOP23527 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST1H2BBP33778 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST1H2BDP58876 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 RAB5BP61020 215 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST1H2BCP62807 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 Q0VG73 95 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST2H2BEQ16778 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.42□□□□□ -1.06
CCDC57-216ENST00000582885 NEXN-AS1Q8NBZ9 246 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 C18orf32Q8TCD1 76 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST1H2BHQ93079 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 VSIG2Q96IQ7 327 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST1H2BNQ99877 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 HIST1H2BMQ99879 126 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 TNFRSF18Q9Y5U5 241 aa8.42□□□□□ -1.06
CCDC57-216ENST00000582885 P0DMU3 169 aa8.41□□□□□ -1.06
CCDC57-216ENST00000582885 FAM231AP0DMU4 169 aa8.41□□□□□ -1.06
CCDC57-216ENST00000582885 FAM231CP0DMU5 169 aa8.41□□□□□ -1.06
CCDC57-216ENST00000582885 LINC00694P0DN24 101 aa8.41□□□□□ -1.06
CCDC57-216ENST00000582885 HTN3P15516 51 aa8.41□□□□□ -1.06
CCDC57-216ENST00000582885 POLR2KP53803 58 aaKnown RBP8.41□□□□□ -1.06
CCDC57-216ENST00000582885 RPL36AP83881 106 aaKnown RBP8.41□□□□□ -1.06
CCDC57-216ENST00000582885 RPL36ALQ969Q0 106 aaKnown RBP8.41□□□□□ -1.06
CCDC57-216ENST00000582885 TRAV26-1A0A087WT03 109 aa8.4□□□□□ -1.06
CCDC57-216ENST00000582885 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
CCDC57-216ENST00000582885 TMEM70Q9BUB7 260 aa8.4□□□□□ -1.06
CCDC57-216ENST00000582885 NXT2Q9NPJ8 142 aaKnown RBP8.4□□□□□ -1.06
CCDC57-216ENST00000582885 Q9UF83 564 aa8.4□□□□□ -1.06
CCDC57-216ENST00000582885 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 K7EMI3 77 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 VCYO14598 125 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 GYPEP15421 78 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 PMCHP20382 165 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 UBE2D3P61077 147 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 UBE2D2P62837 147 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 SH2D6Q7Z4S9 175 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 Q8N8P6 123 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 ZNRF2Q8NHG8 242 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 PHLDA1Q8WV24 401 aaPredicted RBP8.39□□□□□ -1.07
CCDC57-216ENST00000582885 SMIM2Q9BVW6 85 aa8.39□□□□□ -1.07
CCDC57-216ENST00000582885 IGLV2-18A0A075B6J9 118 aa8.38□□□□□ -1.07
CCDC57-216ENST00000582885 LOC100131303A0A0U1RQF7 123 aa8.38□□□□□ -1.07
CCDC57-216ENST00000582885 LINC01546A6NGU7 62 aa8.38□□□□□ -1.07
CCDC57-216ENST00000582885 TCAPO15273 167 aa8.38□□□□□ -1.07
CCDC57-216ENST00000582885 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
CCDC57-216ENST00000582885 COA6Q5JTJ3 125 aaKnown RBP8.38□□□□□ -1.07
CCDC57-216ENST00000582885 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
CCDC57-216ENST00000582885 PRSS3P2Q8NHM4 247 aa8.38□□□□□ -1.07
CCDC57-216ENST00000582885 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
CCDC57-216ENST00000582885 A0A0J9YY99 117 aa8.37□□□□□ -1.07
CCDC57-216ENST00000582885 LOC389332A0A1B0GUA5 103 aa8.37□□□□□ -1.07
CCDC57-216ENST00000582885 GAGE12JA6NER3 117 aa8.37□□□□□ -1.07
CCDC57-216ENST00000582885 I3L3M4 83 aa8.37□□□□□ -1.07
CCDC57-216ENST00000582885 IFI27P40305 119 aaPredicted RBP8.37□□□□□ -1.07
CCDC57-216ENST00000582885 GAGE1Q13065 139 aa8.37□□□□□ -1.07
CCDC57-216ENST00000582885 GAGE4Q13068 117 aa8.37□□□□□ -1.07
CCDC57-216ENST00000582885 GAGE5Q13069 117 aa8.37□□□□□ -1.07
CCDC57-216ENST00000582885 GAGE13Q4V321 117 aa8.37□□□□□ -1.07
CCDC57-216ENST00000582885 ICOSQ9Y6W8 199 aa8.37□□□□□ -1.07
CCDC57-216ENST00000582885 LINC00614P0C842 121 aa8.36□□□□□ -1.07
CCDC57-216ENST00000582885 IQCJQ1A5X6 159 aa8.36□□□□□ -1.07
CCDC57-216ENST00000582885 TMEM97Q5BJF2 176 aa8.36□□□□□ -1.07
CCDC57-216ENST00000582885 NIT1Q86X76 327 aa8.36□□□□□ -1.07
CCDC57-216ENST00000582885 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
CCDC57-216ENST00000582885 C15orf53Q8NAA6 179 aa8.36□□□□□ -1.07
CCDC57-216ENST00000582885 ATP6V0E2Q8NHE4 81 aa8.36□□□□□ -1.07
CCDC57-216ENST00000582885 CHCHD1Q96BP2 118 aaKnown RBP8.36□□□□□ -1.07
CCDC57-216ENST00000582885 KIR2DL4Q99706 377 aa8.36□□□□□ -1.07
CCDC57-216ENST00000582885 A0A096LPF7 62 aa8.35□□□□□ -1.07
CCDC57-216ENST00000582885 FA2HQ7L5A8 372 aa8.35□□□□□ -1.07
CCDC57-216ENST00000582885 NEGR1Q7Z3B1 354 aa8.35□□□□□ -1.07
CCDC57-216ENST00000582885 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
CCDC57-216ENST00000582885 GTSF1LQ9H1H1 148 aa8.35□□□□□ -1.07
CCDC57-216ENST00000582885 NUPR2A6NF83 97 aa8.34□□□□□ -1.07
CCDC57-216ENST00000582885 TSHBP01222 138 aa8.34□□□□□ -1.07
CCDC57-216ENST00000582885 ESDP10768 282 aa8.34□□□□□ -1.07
CCDC57-216ENST00000582885 NDUFA6P56556 154 aa8.34□□□□□ -1.07
CCDC57-216ENST00000582885 TIRAPP58753 221 aa8.34□□□□□ -1.07
CCDC57-216ENST00000582885 CEMP1Q6PRD7 247 aaPredicted RBP8.34□□□□□ -1.07
CCDC57-216ENST00000582885 AP5S1Q9NUS5 200 aa8.34□□□□□ -1.07
CCDC57-216ENST00000582885 SERF1AO75920 110 aa8.33□□□□□ -1.08
CCDC57-216ENST00000582885 S100A6P06703 90 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms