RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 GAGE13Q4V321 117 aa12.84□□□□□ -0.35
ERBB2-212ENST00000582788 DCANP1Q8TF63 244 aa12.84□□□□□ -0.35
ERBB2-212ENST00000582788 PRO0461Q9UI25 63 aa12.84□□□□□ -0.35
ERBB2-212ENST00000582788 KIF25-AS1Q9Y6Z4 181 aa12.84□□□□□ -0.35
ERBB2-212ENST00000582788 RNASE1P07998 156 aaKnown RBP12.84□□□□□ -0.35
ERBB2-212ENST00000582788 LINC00315P59091 139 aa12.84□□□□□ -0.35
ERBB2-212ENST00000582788 C4orf3Q8WVX3 66 aa12.84□□□□□ -0.35
ERBB2-212ENST00000582788 LY6G6DO95868 133 aa12.83□□□□□ -0.36
ERBB2-212ENST00000582788 KHDC1LQ5JSQ8 128 aa12.83□□□□□ -0.36
ERBB2-212ENST00000582788 PRADC1Q9BSG0 188 aa12.83□□□□□ -0.36
ERBB2-212ENST00000582788 RPL32P62910 135 aaKnown RBP12.83□□□□□ -0.36
ERBB2-212ENST00000582788 SCGB2A2Q13296 93 aa12.83□□□□□ -0.36
ERBB2-212ENST00000582788 DUX3Q96PT4 197 aa12.83□□□□□ -0.36
ERBB2-212ENST00000582788 SPAG8Q99932 426 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-212ENST00000582788 KLLNB2CW77 178 aa12.82□□□□□ -0.36
ERBB2-212ENST00000582788 H3BMG7 143 aa12.82□□□□□ -0.36
ERBB2-212ENST00000582788 SMAGPQ0VAQ4 97 aa12.82□□□□□ -0.36
ERBB2-212ENST00000582788 ATP6V0E2Q8NHE4 81 aa12.82□□□□□ -0.36
ERBB2-212ENST00000582788 MUC4Q99102 2169 aa12.81□□□□□ -0.36
ERBB2-212ENST00000582788 KLHL30-AS1Q8NEE0 82 aa12.81□□□□□ -0.36
ERBB2-212ENST00000582788 NF1P21359 2839 aa12.81□□□□□ -0.36
ERBB2-212ENST00000582788 DUSP14O95147 198 aaKnown RBP12.81□□□□□ -0.36
ERBB2-212ENST00000582788 HILS1P60008 231 aa12.81□□□□□ -0.36
ERBB2-212ENST00000582788 ZNF418Q8TF45 676 aaPredicted RBP12.81□□□□□ -0.36
ERBB2-212ENST00000582788 CRYGDP07320 174 aa12.8□□□□□ -0.36
ERBB2-212ENST00000582788 ETDBQ3ZM63 59 aa12.8□□□□□ -0.36
ERBB2-212ENST00000582788 LINC01006Q8NI28 216 aa12.8□□□□□ -0.36
ERBB2-212ENST00000582788 CYSLTR1Q9Y271 337 aa12.8□□□□□ -0.36
ERBB2-212ENST00000582788 TSHBP01222 138 aa12.79□□□□□ -0.36
ERBB2-212ENST00000582788 MORN3Q6PF18 240 aaPredicted RBP12.79□□□□□ -0.36
ERBB2-212ENST00000582788 C11orf44Q8N8P7 122 aa12.79□□□□□ -0.36
ERBB2-212ENST00000582788 ZNF815PA8K554 130 aa12.79□□□□□ -0.36
ERBB2-212ENST00000582788 ID1P41134 155 aa12.79□□□□□ -0.36
ERBB2-212ENST00000582788 C16orf95Q9H693 158 aa12.79□□□□□ -0.36
ERBB2-212ENST00000582788 MTORP42345 2549 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 IGLV4-69A0A075B6H9 119 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 TMEM238LA0A1B0GVL6 79 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 IGIPA6NJ69 53 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 A6NJY4 79 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 POLR2KP53803 58 aaKnown RBP12.78□□□□□ -0.36
ERBB2-212ENST00000582788 SH2D6Q7Z4S9 175 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 CD28P10747 220 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 SUMO4Q6EEV6 95 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 AMTNQ6UX39 209 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 DLX4Q92988 240 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-212ENST00000582788 PLEKHB2Q96CS7 222 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 TP53TG1Q9Y2A0 90 aa12.78□□□□□ -0.36
ERBB2-212ENST00000582788 LINC01549A6NIU2 74 aa12.77□□□□□ -0.37
ERBB2-212ENST00000582788 C11orf86A6NJI1 115 aa12.77□□□□□ -0.37
ERBB2-212ENST00000582788 K7EQG2 157 aa12.77□□□□□ -0.37
ERBB2-212ENST00000582788 ZFP2Q6ZN57 461 aa12.77□□□□□ -0.37
ERBB2-212ENST00000582788 JPT2Q9H910 190 aa12.77□□□□□ -0.37
ERBB2-212ENST00000582788 ZNF688P0C7X2 276 aa12.76□□□□□ -0.37
ERBB2-212ENST00000582788 FAM159AQ6UWV7 190 aa12.76□□□□□ -0.37
ERBB2-212ENST00000582788 WFDC12Q8WWY7 111 aa12.76□□□□□ -0.37
ERBB2-212ENST00000582788 HIVEP2P31629 2446 aa12.75□□□□□ -0.37
ERBB2-212ENST00000582788 UBE2D1P51668 147 aa12.75□□□□□ -0.37
ERBB2-212ENST00000582788 PAPPA-AS1Q5QFB9 102 aa12.75□□□□□ -0.37
ERBB2-212ENST00000582788 C1QTNF4Q9BXJ3 329 aa12.75□□□□□ -0.37
ERBB2-212ENST00000582788 A0A1W2PRX2 142 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 PMVKQ15126 192 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 LYRM7Q5U5X0 104 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 TMEM141Q96I45 108 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 RAX2Q96IS3 184 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 PEMTQ9UBM1 199 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 VCYO14598 125 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 APOMO95445 188 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 CFAP126Q5VTH2 177 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 SCGB1D4Q6XE38 83 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 MTURNQ8N3F0 131 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 TIMM17AQ99595 171 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 CITED2Q99967 270 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-212ENST00000582788 PGPEP1Q9NXJ5 209 aa12.74□□□□□ -0.37
ERBB2-212ENST00000582788 A0A087WWL8 130 aa12.73□□□□□ -0.37
ERBB2-212ENST00000582788 TRBV6-5A0A0K0K1A5 114 aa12.73□□□□□ -0.37
ERBB2-212ENST00000582788 SNRPD3P62318 126 aaKnown RBP12.73□□□□□ -0.37
ERBB2-212ENST00000582788 RPL39P62891 51 aaKnown RBP12.73□□□□□ -0.37
ERBB2-212ENST00000582788 FOXI1Q12951 378 aa12.73□□□□□ -0.37
ERBB2-212ENST00000582788 TRAV12-3A0A0B4J271 114 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 CD7P09564 240 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 HERVK_113P61574 105 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 C9orf85Q96MD7 179 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 KIR2DL4Q99706 377 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 VCX2Q9H322 139 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 TRBV27A0A0K0K1C4 114 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 INAFM1C9JVW0 142 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 FHL3Q13643 280 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
ERBB2-212ENST00000582788 IGHV3-16A0A0C4DH30 117 aa12.71□□□□□ -0.37
ERBB2-212ENST00000582788 A0A0J9YY99 117 aa12.71□□□□□ -0.37
ERBB2-212ENST00000582788 SDHAF1A6NFY7 115 aa12.71□□□□□ -0.37
ERBB2-212ENST00000582788 EMP1P54849 157 aa12.71□□□□□ -0.37
ERBB2-212ENST00000582788 MRPL16Q9NX20 251 aaKnown RBP12.71□□□□□ -0.37
ERBB2-212ENST00000582788 A0A0J9YX75 114 aa12.71□□□□□ -0.38
ERBB2-212ENST00000582788 NDUFA7O95182 113 aa12.71□□□□□ -0.38
ERBB2-212ENST00000582788 SRSF9Q13242 221 aaKnown RBP eCLIP12.71□□□□□ -0.38
ERBB2-212ENST00000582788 DEFB104AQ8WTQ1 72 aa12.71□□□□□ -0.38
ERBB2-212ENST00000582788 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-212ENST00000582788 F5H697 171 aa12.7□□□□□ -0.38
ERBB2-212ENST00000582788 CCL24O00175 119 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms