RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 AMELXQ99217 191 aa10.14□□□□□ -0.79
RNF43-205ENST00000581868 IGHV3-73A0A0B4J1V6 119 aa10.13□□□□□ -0.79
RNF43-205ENST00000581868 SCGB1A1P11684 91 aa10.13□□□□□ -0.79
RNF43-205ENST00000581868 TRPT1Q86TN4 253 aaKnown RBP10.13□□□□□ -0.79
RNF43-205ENST00000581868 DEFB112Q30KQ8 113 aa10.13□□□□□ -0.79
RNF43-205ENST00000581868 RAX2Q96IS3 184 aa10.13□□□□□ -0.79
RNF43-205ENST00000581868 A0A0J9YXV3 536 aa10.12□□□□□ -0.79
RNF43-205ENST00000581868 H7C2G1 150 aa10.12□□□□□ -0.79
RNF43-205ENST00000581868 K7EQG2 157 aa10.12□□□□□ -0.79
RNF43-205ENST00000581868 LYRM7Q5U5X0 104 aa10.12□□□□□ -0.79
RNF43-205ENST00000581868 C10orf126Q8N4M7 172 aa10.12□□□□□ -0.79
RNF43-205ENST00000581868 PRO1854Q9UHT4 67 aa10.12□□□□□ -0.79
RNF43-205ENST00000581868 TRAV2A0A0B4J234 112 aa10.12□□□□□ -0.79
RNF43-205ENST00000581868 NSUN5P1Q3KNT7 163 aa10.12□□□□□ -0.79
RNF43-205ENST00000581868 CREBBPQ92793 2442 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 TMEM223A0PJW6 202 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 A4D1N5 150 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 RHOHQ15669 191 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 C20orf203Q8NBC4 194 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 NRGNQ92686 78 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 ODF3Q96PU9 254 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 ZNF580Q9UK33 172 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 B4DSR2 109 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 I3L3M4 83 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 LEPROTO15243 131 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 VCX2Q9H322 139 aa10.11□□□□□ -0.79
RNF43-205ENST00000581868 ZNF22P17026 224 aaPredicted RBP10.1□□□□□ -0.79
RNF43-205ENST00000581868 ATP6V0E2Q8NHE4 81 aa10.1□□□□□ -0.79
RNF43-205ENST00000581868 RHODO00212 210 aa10.1□□□□□ -0.79
RNF43-205ENST00000581868 PRORYQ9H606 182 aa10.1□□□□□ -0.79
RNF43-205ENST00000581868 CSMD2Q7Z408 3487 aa10.1□□□□□ -0.79
RNF43-205ENST00000581868 UTP20O75691 2785 aaKnown RBP10.09□□□□□ -0.79
RNF43-205ENST00000581868 IGLV4-3A0A075B6K6 122 aa10.09□□□□□ -0.79
RNF43-205ENST00000581868 ADARB2-AS1A8MUL3 147 aa10.09□□□□□ -0.79
RNF43-205ENST00000581868 PRM2P04554 102 aa10.09□□□□□ -0.79
RNF43-205ENST00000581868 PROK1P58294 105 aa10.09□□□□□ -0.79
RNF43-205ENST00000581868 CARD19Q96LW7 228 aa10.09□□□□□ -0.79
RNF43-205ENST00000581868 MUSTN1Q8IVN3 82 aa10.09□□□□□ -0.79
RNF43-205ENST00000581868 SPXQ9BT56 116 aa10.09□□□□□ -0.79
RNF43-205ENST00000581868 CDIP1Q9H305 208 aa10.09□□□□□ -0.79
RNF43-205ENST00000581868 TRBV20-1A0A075B6N2 111 aa10.08□□□□□ -0.8
RNF43-205ENST00000581868 A8MWV9 139 aa10.08□□□□□ -0.8
RNF43-205ENST00000581868 RNASE13Q5GAN3 156 aaKnown RBP10.08□□□□□ -0.8
RNF43-205ENST00000581868 CEMP1Q6PRD7 247 aaPredicted RBP10.08□□□□□ -0.8
RNF43-205ENST00000581868 MAPK1IP1LQ8NDC0 245 aa10.08□□□□□ -0.8
RNF43-205ENST00000581868 FLNCQ14315 2725 aa10.08□□□□□ -0.8
RNF43-205ENST00000581868 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
RNF43-205ENST00000581868 EIF4EBP3O60516 100 aaPredicted RBP10.08□□□□□ -0.8
RNF43-205ENST00000581868 FHL3Q13643 280 aa10.08□□□□□ -0.8
RNF43-205ENST00000581868 TEN1Q86WV5 123 aa10.08□□□□□ -0.8
RNF43-205ENST00000581868 RBMY1A1P0DJD3 496 aaKnown RBP10.07□□□□□ -0.8
RNF43-205ENST00000581868 RBMY1CP0DJD4 496 aa10.07□□□□□ -0.8
RNF43-205ENST00000581868 RBMY1FQ15415 496 aaKnown RBP10.07□□□□□ -0.8
RNF43-205ENST00000581868 PPDPFLQ8WWR9 84 aa10.07□□□□□ -0.8
RNF43-205ENST00000581868 CFAP46Q8IYW2 2715 aa10.07□□□□□ -0.8
RNF43-205ENST00000581868 TRGV11A0A075B6L2 103 aa10.06□□□□□ -0.8
RNF43-205ENST00000581868 CD28P10747 220 aa10.06□□□□□ -0.8
RNF43-205ENST00000581868 HOXD3P31249 432 aaPredicted RBP10.06□□□□□ -0.8
RNF43-205ENST00000581868 IGHV3-33P01772 117 aa10.06□□□□□ -0.8
RNF43-205ENST00000581868 Q1RN00 199 aa10.06□□□□□ -0.8
RNF43-205ENST00000581868 ANKRD29Q8N6D5 301 aa10.06□□□□□ -0.8
RNF43-205ENST00000581868 ERG28Q9UKR5 140 aa10.06□□□□□ -0.8
RNF43-205ENST00000581868 ZANQ9Y493 2812 aa10.06□□□□□ -0.8
RNF43-205ENST00000581868 A0A1B0GV72 72 aa10.05□□□□□ -0.8
RNF43-205ENST00000581868 MT-ATP8P03928 68 aa10.05□□□□□ -0.8
RNF43-205ENST00000581868 TMEM263Q8WUH6 116 aaKnown RBP10.05□□□□□ -0.8
RNF43-205ENST00000581868 CLUHP3Q96NS8 147 aa10.05□□□□□ -0.8
RNF43-205ENST00000581868 Q9UF83 564 aa10.05□□□□□ -0.8
RNF43-205ENST00000581868 USP9YO00507 2555 aaPredicted RBP10.05□□□□□ -0.8
RNF43-205ENST00000581868 TRAV8-3A0A0A6YYJ7 113 aa10.05□□□□□ -0.8
RNF43-205ENST00000581868 C9JAW5 83 aa10.05□□□□□ -0.8
RNF43-205ENST00000581868 SPINK8P0C7L1 97 aa10.05□□□□□ -0.8
RNF43-205ENST00000581868 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 CKS1BP61024 79 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 TCTEX1D4Q5JR98 221 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 BEX4Q9NWD9 120 aaPredicted RBP10.04□□□□□ -0.8
RNF43-205ENST00000581868 A0A0J9YXY3 114 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 PRSS2P07478 247 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 XGP55808 180 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 DEFB131AP59861 70 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 DEFB136Q30KP8 78 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 TNFRSF18Q9Y5U5 241 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 PKD1L2Q7Z442 2459 aa10.04□□□□□ -0.8
RNF43-205ENST00000581868 SLC25A20O43772 301 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 SBSPONQ8IVN8 264 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 TIMM21Q9BVV7 248 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 DUX3Q96PT4 197 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 USP9XQ93008 2570 aaPredicted RBP10.03□□□□□ -0.8
RNF43-205ENST00000581868 M0R2P5 195 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 ELANEP08246 267 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 CRYBA4P53673 196 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 C18orf65Q6ZTR6 163 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 Q6ZUT4 128 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
RNF43-205ENST00000581868 TMEM89A2RUT3 159 aa10.02□□□□□ -0.81
RNF43-205ENST00000581868 A8MZ25 164 aa10.02□□□□□ -0.81
RNF43-205ENST00000581868 GATA3P23771 443 aa10.02□□□□□ -0.81
RNF43-205ENST00000581868 SLURP1P55000 103 aa10.02□□□□□ -0.81
RNF43-205ENST00000581868 LINC01356Q8N9X3 169 aa10.02□□□□□ -0.81
RNF43-205ENST00000581868 A0A0B4J2C4 111 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms