RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 EMP1P54849 157 aa9.95□□□□□ -0.82
CDK5RAP3-219ENST00000580670 FAM104BQ5XKR9 115 aa9.95□□□□□ -0.82
CDK5RAP3-219ENST00000580670 AMN1Q8IY45 258 aa9.95□□□□□ -0.82
CDK5RAP3-219ENST00000580670 C14orf178Q8N769 122 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-219ENST00000580670 OR4C5Q8NGB2 326 aa9.95□□□□□ -0.82
CDK5RAP3-219ENST00000580670 PTH2Q96A98 100 aa9.95□□□□□ -0.82
CDK5RAP3-219ENST00000580670 NOP10Q9NPE3 64 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-219ENST00000580670 MRPL16Q9NX20 251 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-219ENST00000580670 DAZ2Q13117 558 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-219ENST00000580670 MPV17L2Q567V2 206 aa9.94□□□□□ -0.82
CDK5RAP3-219ENST00000580670 PMCHL2Q9BQD1 86 aa9.94□□□□□ -0.82
CDK5RAP3-219ENST00000580670 MAP1LC3CQ9BXW4 147 aa9.94□□□□□ -0.82
CDK5RAP3-219ENST00000580670 JPT2Q9H910 190 aa9.94□□□□□ -0.82
CDK5RAP3-219ENST00000580670 HSPB8Q9UJY1 196 aa9.94□□□□□ -0.82
CDK5RAP3-219ENST00000580670 TRGV1A0A0A0MS02 117 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 HSBP1L1C9JCN9 74 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 PPBPP02775 128 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 SMIM17P0DL12 118 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 C21orf62-AS1Q17RA5 79 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 LINC00173Q6ZV60 143 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 OVOL2Q9BRP0 275 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 RETNQ9HD89 108 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 TP53TG1Q9Y2A0 90 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 A0A087WWL8 130 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 hDV102S1A0JD36 115 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 MIFP14174 115 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 PIK3CD-AS1Q5SR53 167 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 RASL10AQ92737 203 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 RNF185Q96GF1 192 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 DPH3P1Q9H4G8 78 aa9.93□□□□□ -0.82
CDK5RAP3-219ENST00000580670 IGHV4-28A0A0C4DH34 117 aa9.92□□□□□ -0.82
CDK5RAP3-219ENST00000580670 NUDT3O95989 172 aa9.92□□□□□ -0.82
CDK5RAP3-219ENST00000580670 VAMP3Q15836 100 aa9.92□□□□□ -0.82
CDK5RAP3-219ENST00000580670 LGALS9BQ3B8N2 356 aa9.92□□□□□ -0.82
CDK5RAP3-219ENST00000580670 Q6ZTI0 123 aa9.92□□□□□ -0.82
CDK5RAP3-219ENST00000580670 SBSPONQ8IVN8 264 aa9.92□□□□□ -0.82
CDK5RAP3-219ENST00000580670 A8MWV9 139 aa9.91□□□□□ -0.82
CDK5RAP3-219ENST00000580670 DEFB4AO15263 64 aa9.91□□□□□ -0.82
CDK5RAP3-219ENST00000580670 MGPP08493 103 aa9.91□□□□□ -0.82
CDK5RAP3-219ENST00000580670 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-219ENST00000580670 FAM74A4Q5TZK3 123 aa9.91□□□□□ -0.82
CDK5RAP3-219ENST00000580670 Q8NAQ8 132 aa9.91□□□□□ -0.82
CDK5RAP3-219ENST00000580670 MRAPQ8TCY5 172 aa9.91□□□□□ -0.82
CDK5RAP3-219ENST00000580670 KIF25-AS1Q9Y6Z4 181 aa9.91□□□□□ -0.82
CDK5RAP3-219ENST00000580670 CRYGDP07320 174 aa9.91□□□□□ -0.82
CDK5RAP3-219ENST00000580670 GAGE12BA1L429 117 aa9.9□□□□□ -0.82
CDK5RAP3-219ENST00000580670 GAGE7O76087 117 aa9.9□□□□□ -0.82
CDK5RAP3-219ENST00000580670 GAGE12FP0CL80 117 aa9.9□□□□□ -0.82
CDK5RAP3-219ENST00000580670 GAGE12GP0CL81 117 aa9.9□□□□□ -0.82
CDK5RAP3-219ENST00000580670 GAGE12IP0CL82 117 aa9.9□□□□□ -0.82
CDK5RAP3-219ENST00000580670 COX8AP10176 69 aa9.9□□□□□ -0.82
CDK5RAP3-219ENST00000580670 CFAP126Q5VTH2 177 aa9.9□□□□□ -0.82
CDK5RAP3-219ENST00000580670 D6R8Y8 96 aa9.89□□□□□ -0.83
CDK5RAP3-219ENST00000580670 LINC00315P59091 139 aa9.89□□□□□ -0.83
CDK5RAP3-219ENST00000580670 COTL1Q14019 142 aa9.89□□□□□ -0.83
CDK5RAP3-219ENST00000580670 F5H697 171 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 SMKR1H3BMG3 65 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 RS1O15537 224 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 NCR2O95944 276 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 CKS2P33552 79 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 ORMDL3Q8N138 153 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 CST9LQ9H4G1 147 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 IGHV3-73A0A0B4J1V6 119 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 TRAV26-2A0A0B4J265 109 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 ZNF56Q15929 161 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 FAM222AQ5U5X8 452 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 POM121L12Q8N7R1 296 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 MRAP2Q96G30 205 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 SPATA25Q9BR10 227 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 U3KQK5 164 aa9.88□□□□□ -0.83
CDK5RAP3-219ENST00000580670 LYRM9A8MSI8 78 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 DEFB130BP0DP73 79 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 DEFB130AP0DP74 79 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 SEC11AP67812 179 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 OCIAD2Q56VL3 154 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 UFSP1Q6NVU6 142 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 C2orf91Q6ZV80 131 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 PRELID3AQ96N28 172 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 TM2D3Q9BRN9 247 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 AP5S1Q9NUS5 200 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 TP73-AS1Q9UF72 201 aa9.87□□□□□ -0.83
CDK5RAP3-219ENST00000580670 NACAE9PAV3 2078 aa9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 TRAV4A0A0B4J268 109 aa9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 RHODO00212 210 aa9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 IGHV3-53P01767 116 aa9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 AMMECR1LQ6DCA0 310 aa9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 DKK2Q9UBU2 259 aa9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 GATA1P15976 413 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 SUMO4Q6EEV6 95 aa9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 LINC00612Q8N6U2 182 aa9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 ZNF479Q96JC4 524 aa9.86□□□□□ -0.83
CDK5RAP3-219ENST00000580670 ZFP2Q6ZN57 461 aa9.85□□□□□ -0.83
CDK5RAP3-219ENST00000580670 CELA1Q9UNI1 258 aa9.85□□□□□ -0.83
CDK5RAP3-219ENST00000580670 NPYP01303 97 aa9.84□□□□□ -0.83
CDK5RAP3-219ENST00000580670 SPART-AS1P0CW21 52 aa9.84□□□□□ -0.83
CDK5RAP3-219ENST00000580670 FGF6P10767 208 aa9.84□□□□□ -0.83
CDK5RAP3-219ENST00000580670 TMEM97Q5BJF2 176 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms