RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 C2orf88Q9BSF0 95 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 ZMAT4Q9H898 229 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 C19orf73Q9NVV2 129 aa8.09□□□□□ -1.11
SKA2-204ENST00000578519 CHTOPQ9Y3Y2 248 aaKnown RBP8.09□□□□□ -1.11
SKA2-204ENST00000578519 PDZD2O15018 2839 aa8.08□□□□□ -1.12
SKA2-204ENST00000578519 CRYBG3Q68DQ2 2970 aa8.08□□□□□ -1.12
SKA2-204ENST00000578519 TRGV1A0A0A0MS02 117 aa8.08□□□□□ -1.12
SKA2-204ENST00000578519 TRAV4A0A0B4J268 109 aa8.08□□□□□ -1.12
SKA2-204ENST00000578519 TRBV10-1A0A0K0K1A3 114 aa8.08□□□□□ -1.12
SKA2-204ENST00000578519 F8VRH5 84 aa8.08□□□□□ -1.12
SKA2-204ENST00000578519 SIVA1O15304 175 aa8.08□□□□□ -1.12
SKA2-204ENST00000578519 DLEU1O43261 78 aa8.08□□□□□ -1.12
SKA2-204ENST00000578519 RNASE8Q8TDE3 154 aaKnown RBP8.08□□□□□ -1.12
SKA2-204ENST00000578519 CRYBA4P53673 196 aa8.07□□□□□ -1.12
SKA2-204ENST00000578519 APOC4P55056 127 aa8.07□□□□□ -1.12
SKA2-204ENST00000578519 MAJINQ3KP22 176 aa8.07□□□□□ -1.12
SKA2-204ENST00000578519 TMEM97Q5BJF2 176 aa8.07□□□□□ -1.12
SKA2-204ENST00000578519 UFSP1Q6NVU6 142 aa8.07□□□□□ -1.12
SKA2-204ENST00000578519 C12orf54Q6X4T0 127 aa8.07□□□□□ -1.12
SKA2-204ENST00000578519 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
SKA2-204ENST00000578519 TP53TG1Q9Y2A0 90 aa8.07□□□□□ -1.12
SKA2-204ENST00000578519 TEX15Q9BXT5 2789 aa8.07□□□□□ -1.12
SKA2-204ENST00000578519 ASH1LQ9NR48 2969 aaKnown RBP8.06□□□□□ -1.12
SKA2-204ENST00000578519 HERVK_113P61574 105 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 RPL36AP83881 106 aaKnown RBP8.06□□□□□ -1.12
SKA2-204ENST00000578519 PMVKQ15126 192 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 COL5A1-AS1Q5SY13 56 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 LINC00469Q8N7U9 141 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 NEXN-AS1Q8NBZ9 246 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 WFDC9Q8NEX5 89 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 KIR2DL5BQ8NHK3 375 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 IL17DQ8TAD2 202 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 RPL36ALQ969Q0 106 aaKnown RBP8.06□□□□□ -1.12
SKA2-204ENST00000578519 OVOL2Q9BRP0 275 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 DKK2Q9UBU2 259 aa8.06□□□□□ -1.12
SKA2-204ENST00000578519 IGHV3-73A0A0B4J1V6 119 aa8.05□□□□□ -1.12
SKA2-204ENST00000578519 COTL1Q14019 142 aa8.05□□□□□ -1.12
SKA2-204ENST00000578519 BAALCQ8WXS3 180 aa8.05□□□□□ -1.12
SKA2-204ENST00000578519 MRPL35Q9NZE8 188 aaKnown RBP8.05□□□□□ -1.12
SKA2-204ENST00000578519 FLNAP21333 2647 aaKnown RBP8.05□□□□□ -1.12
SKA2-204ENST00000578519 HELZ2Q9BYK8 2649 aaKnown RBP8.05□□□□□ -1.12
SKA2-204ENST00000578519 TENM4Q6N022 2769 aa8.04□□□□□ -1.12
SKA2-204ENST00000578519 TRGV2A0A075B6R0 118 aa8.04□□□□□ -1.12
SKA2-204ENST00000578519 PRSS29PA6NIE9 313 aa8.04□□□□□ -1.12
SKA2-204ENST00000578519 C20orf203Q8NBC4 194 aa8.04□□□□□ -1.12
SKA2-204ENST00000578519 SNHG12Q9BXW3 62 aa8.04□□□□□ -1.12
SKA2-204ENST00000578519 PYGO1Q9Y3Y4 419 aa8.04□□□□□ -1.12
SKA2-204ENST00000578519 UNC79Q9P2D8 2635 aa8.04□□□□□ -1.12
SKA2-204ENST00000578519 MUC4Q99102 2169 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 IGIPA6NJ69 53 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 TSHBP01222 138 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 NMUP48645 174 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 BATFQ16520 125 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 ZC2HC1BQ5TFG8 222 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 NEGR1Q7Z3B1 354 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 DAZ4Q86SG3 579 aaKnown RBP8.03□□□□□ -1.12
SKA2-204ENST00000578519 BOD1L2Q8IYS8 172 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 STPG4Q8N801 248 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 CSNK1G2-AS1Q8NCQ2 148 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 VCX2Q9H322 139 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 NOP10Q9NPE3 64 aaKnown RBP8.03□□□□□ -1.12
SKA2-204ENST00000578519 DAZ3Q9NR90 486 aaKnown RBP8.03□□□□□ -1.12
SKA2-204ENST00000578519 SPANXA1Q9NS26 97 aa8.03□□□□□ -1.12
SKA2-204ENST00000578519 SONP18583 2426 aaKnown RBP8.03□□□□□ -1.12
SKA2-204ENST00000578519 CENPEQ02224 2701 aa8.02□□□□□ -1.12
SKA2-204ENST00000578519 TRBV7-3A0A075B6L6 115 aa8.02□□□□□ -1.13
SKA2-204ENST00000578519 K7EQD1 137 aa8.02□□□□□ -1.13
SKA2-204ENST00000578519 GIG44P09565 113 aaPredicted RBP8.02□□□□□ -1.13
SKA2-204ENST00000578519 ANKRD39Q53RE8 183 aa8.02□□□□□ -1.13
SKA2-204ENST00000578519 SHISA2Q6UWI4 295 aa8.02□□□□□ -1.13
SKA2-204ENST00000578519 PRADC1Q9BSG0 188 aa8.02□□□□□ -1.13
SKA2-204ENST00000578519 VPS13CQ709C8 3753 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 AGRNO00468 2067 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 TRGV4A0A0C4DH28 118 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 TRBV6-4A0A1B0GX49 114 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 PRM2P04554 102 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 C3orf56Q8N813 242 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 OR11H2Q8NH07 326 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 WFDC10AQ9H1F0 79 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 CST9LQ9H4G1 147 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 HHLA3Q9XRX5 114 aa8.01□□□□□ -1.13
SKA2-204ENST00000578519 DGAT2L7PQ6IED9 249 aa8□□□□□ -1.13
SKA2-204ENST00000578519 Q6ZTI0 123 aa8□□□□□ -1.13
SKA2-204ENST00000578519 ZNRF2Q8NHG8 242 aa8□□□□□ -1.13
SKA2-204ENST00000578519 TIMM21Q9BVV7 248 aa8□□□□□ -1.13
SKA2-204ENST00000578519 HIGD1BQ9P298 99 aa8□□□□□ -1.13
SKA2-204ENST00000578519 FASNP49327 2511 aaKnown RBP8□□□□□ -1.13
SKA2-204ENST00000578519 GAGE12BA1L429 117 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 LYRM9A8MSI8 78 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 EREGO14944 169 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 GAGE7O76087 117 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 GAGE12FP0CL80 117 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 GAGE12GP0CL81 117 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 GAGE12IP0CL82 117 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
SKA2-204ENST00000578519 RPL39P62891 51 aaKnown RBP7.99□□□□□ -1.13
SKA2-204ENST00000578519 SEC11AP67812 179 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 HSD52Q0P140 79 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 ZNF479Q96JC4 524 aa7.99□□□□□ -1.13
SKA2-204ENST00000578519 TLN2Q9Y4G6 2542 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms