RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
ITGB4-204ENST00000578318 BAGE2Q86Y30 109 aa9.45□□□□□ -0.9
ITGB4-204ENST00000578318 OR10G8Q8NGN5 311 aa9.45□□□□□ -0.9
ITGB4-204ENST00000578318 DERL1Q9BUN8 251 aa9.45□□□□□ -0.9
ITGB4-204ENST00000578318 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
ITGB4-204ENST00000578318 TRBV6-8A0A0A6YYG3 113 aa9.44□□□□□ -0.9
ITGB4-204ENST00000578318 CRPP02741 224 aa9.44□□□□□ -0.9
ITGB4-204ENST00000578318 RPL35P42766 123 aaKnown RBP9.44□□□□□ -0.9
ITGB4-204ENST00000578318 CIRBP-AS1Q8TBR5 109 aa9.44□□□□□ -0.9
ITGB4-204ENST00000578318 C1orf43Q9BWL3 253 aa9.44□□□□□ -0.9
ITGB4-204ENST00000578318 CXCL1P09341 107 aa9.43□□□□□ -0.9
ITGB4-204ENST00000578318 RAB4BP61018 213 aa9.43□□□□□ -0.9
ITGB4-204ENST00000578318 MEF2BQ02080 365 aaPredicted RBP9.43□□□□□ -0.9
ITGB4-204ENST00000578318 ZNF56Q15929 161 aa9.43□□□□□ -0.9
ITGB4-204ENST00000578318 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.43□□□□□ -0.9
ITGB4-204ENST00000578318 NEXN-AS1Q8NBZ9 246 aa9.43□□□□□ -0.9
ITGB4-204ENST00000578318 FAT3Q8TDW7 4589 aa9.43□□□□□ -0.9
ITGB4-204ENST00000578318 IFNA1P01562 189 aa9.42□□□□□ -0.9
ITGB4-204ENST00000578318 BCL2P10415 239 aa9.42□□□□□ -0.9
ITGB4-204ENST00000578318 PKIAP61925 76 aa9.42□□□□□ -0.9
ITGB4-204ENST00000578318 OR10AG1Q8NH19 301 aa9.42□□□□□ -0.9
ITGB4-204ENST00000578318 PDE6DO43924 150 aa9.41□□□□□ -0.9
ITGB4-204ENST00000578318 IGLV2-8P01709 118 aa9.41□□□□□ -0.9
ITGB4-204ENST00000578318 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
ITGB4-204ENST00000578318 RPL19P84098 196 aaKnown RBP9.41□□□□□ -0.9
ITGB4-204ENST00000578318 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
ITGB4-204ENST00000578318 CENPWQ5EE01 88 aa9.41□□□□□ -0.9
ITGB4-204ENST00000578318 PRR27Q6MZM9 219 aa9.41□□□□□ -0.9
ITGB4-204ENST00000578318 ENHOQ6UWT2 76 aa9.41□□□□□ -0.9
ITGB4-204ENST00000578318 C15orf54Q8N8G6 183 aa9.41□□□□□ -0.9
ITGB4-204ENST00000578318 NKX2-5P52952 324 aaPredicted RBP9.4□□□□□ -0.9
ITGB4-204ENST00000578318 ALKAL2Q6UX46 152 aa9.4□□□□□ -0.9
ITGB4-204ENST00000578318 VAX2Q9UIW0 290 aa9.4□□□□□ -0.9
ITGB4-204ENST00000578318 RAB19A4D1S5 217 aa9.39□□□□□ -0.91
ITGB4-204ENST00000578318 SNAI2O43623 268 aa9.39□□□□□ -0.91
ITGB4-204ENST00000578318 OXTP01178 125 aa9.39□□□□□ -0.91
ITGB4-204ENST00000578318 ANGP03950 147 aaKnown RBP9.39□□□□□ -0.91
ITGB4-204ENST00000578318 TAGLN2P37802 199 aaKnown RBP9.39□□□□□ -0.91
ITGB4-204ENST00000578318 MIAQ16674 131 aa9.39□□□□□ -0.91
ITGB4-204ENST00000578318 TMEM97Q5BJF2 176 aa9.39□□□□□ -0.91
ITGB4-204ENST00000578318 CHCHD5Q9BSY4 110 aa9.39□□□□□ -0.91
ITGB4-204ENST00000578318 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
ITGB4-204ENST00000578318 TRBV20OR9-2A0A075B6H5 130 aa9.38□□□□□ -0.91
ITGB4-204ENST00000578318 USP17L23D6RBM5 183 aa9.38□□□□□ -0.91
ITGB4-204ENST00000578318 HLA-DQA1P01909 254 aa9.38□□□□□ -0.91
ITGB4-204ENST00000578318 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
ITGB4-204ENST00000578318 GNG4P50150 75 aa9.38□□□□□ -0.91
ITGB4-204ENST00000578318 SERTAD4-AS1Q5TG53 156 aa9.38□□□□□ -0.91
ITGB4-204ENST00000578318 SPANXN1Q5VSR9 72 aa9.38□□□□□ -0.91
ITGB4-204ENST00000578318 SMIM12Q96EX1 92 aa9.38□□□□□ -0.91
ITGB4-204ENST00000578318 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
ITGB4-204ENST00000578318 F5H697 171 aa9.37□□□□□ -0.91
ITGB4-204ENST00000578318 BLOC1S1P78537 153 aa9.37□□□□□ -0.91
ITGB4-204ENST00000578318 LYPD6BQ8NI32 183 aa9.37□□□□□ -0.91
ITGB4-204ENST00000578318 MED9Q9NWA0 146 aa9.37□□□□□ -0.91
ITGB4-204ENST00000578318 MUC21A0A0G2JKD1 596 aa9.36□□□□□ -0.91
ITGB4-204ENST00000578318 MUC21A0A140T8X8 626 aa9.36□□□□□ -0.91
ITGB4-204ENST00000578318 C19orf71A6NCJ1 209 aa9.36□□□□□ -0.91
ITGB4-204ENST00000578318 SMIM17P0DL12 118 aa9.36□□□□□ -0.91
ITGB4-204ENST00000578318 AP1S3Q96PC3 154 aa9.36□□□□□ -0.91
ITGB4-204ENST00000578318 PRSS1P07477 247 aa9.35□□□□□ -0.91
ITGB4-204ENST00000578318 RPL37AP61513 92 aaKnown RBP9.35□□□□□ -0.91
ITGB4-204ENST00000578318 RBX1P62877 108 aa9.35□□□□□ -0.91
ITGB4-204ENST00000578318 DGAT2L7PQ6IED9 249 aa9.35□□□□□ -0.91
ITGB4-204ENST00000578318 NTM-AS1Q6ZSK4 140 aa9.35□□□□□ -0.91
ITGB4-204ENST00000578318 PRR34Q9NV39 138 aa9.35□□□□□ -0.91
ITGB4-204ENST00000578318 PKHD1L1Q86WI1 4243 aa9.35□□□□□ -0.91
ITGB4-204ENST00000578318 TRBV25-1A0A075B6N4 114 aa9.34□□□□□ -0.91
ITGB4-204ENST00000578318 GAGE6Q13070 117 aa9.34□□□□□ -0.91
ITGB4-204ENST00000578318 C9orf163Q8N9P6 203 aa9.34□□□□□ -0.91
ITGB4-204ENST00000578318 DAZAP1Q96EP5 407 aaKnown RBP9.34□□□□□ -0.91
ITGB4-204ENST00000578318 KIF25-AS1Q9Y6Z4 181 aa9.34□□□□□ -0.91
ITGB4-204ENST00000578318 IGLC6P0CF74 106 aa9.33□□□□□ -0.92
ITGB4-204ENST00000578318 GZMBP10144 247 aa9.33□□□□□ -0.92
ITGB4-204ENST00000578318 SSTP61278 116 aa9.33□□□□□ -0.92
ITGB4-204ENST00000578318 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
ITGB4-204ENST00000578318 LINC00269Q8N2A0 174 aa9.33□□□□□ -0.92
ITGB4-204ENST00000578318 OR2D3Q8NGH3 330 aa9.33□□□□□ -0.92
ITGB4-204ENST00000578318 IGHV1-24A0A0C4DH33 117 aa9.32□□□□□ -0.92
ITGB4-204ENST00000578318 TMEM250H0YL14 139 aa9.32□□□□□ -0.92
ITGB4-204ENST00000578318 P01737 135 aa9.32□□□□□ -0.92
ITGB4-204ENST00000578318 RPS20P60866 119 aaKnown RBP9.32□□□□□ -0.92
ITGB4-204ENST00000578318 IQCJQ1A5X6 159 aa9.32□□□□□ -0.92
ITGB4-204ENST00000578318 KRTAP26-1Q6PEX3 210 aa9.32□□□□□ -0.92
ITGB4-204ENST00000578318 BIN3Q9NQY0 253 aa9.32□□□□□ -0.92
ITGB4-204ENST00000578318 H7C1H1 209 aa9.31□□□□□ -0.92
ITGB4-204ENST00000578318 MGPP08493 103 aa9.31□□□□□ -0.92
ITGB4-204ENST00000578318 CLRN3Q8NCR9 226 aa9.31□□□□□ -0.92
ITGB4-204ENST00000578318 K7EN84 100 aa9.3□□□□□ -0.92
ITGB4-204ENST00000578318 M0QY20 66 aa9.3□□□□□ -0.92
ITGB4-204ENST00000578318 REG3AQ06141 175 aa9.3□□□□□ -0.92
ITGB4-204ENST00000578318 FER1L6-AS1Q8NA97 138 aa9.3□□□□□ -0.92
ITGB4-204ENST00000578318 OCC1Q8TAD7 63 aa9.3□□□□□ -0.92
ITGB4-204ENST00000578318 TPPP3Q9BW30 176 aa9.3□□□□□ -0.92
ITGB4-204ENST00000578318 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
ITGB4-204ENST00000578318 XKRY2A2RUG3 117 aa9.29□□□□□ -0.92
ITGB4-204ENST00000578318 CACNG7P62955 275 aa9.29□□□□□ -0.92
ITGB4-204ENST00000578318 SUMO4Q6EEV6 95 aa9.29□□□□□ -0.92
ITGB4-204ENST00000578318 NUDT10Q8NFP7 164 aa9.29□□□□□ -0.92
ITGB4-204ENST00000578318 NUDT11Q96G61 164 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms