RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 IGHV3-73A0A0B4J1V6 119 aa20.07■□□□□ 0.8
LIMD2-203ENST00000578067 CFAP126Q5VTH2 177 aa20.07■□□□□ 0.8
LIMD2-203ENST00000578067 MRPL16Q9NX20 251 aaKnown RBP20.07■□□□□ 0.8
LIMD2-203ENST00000578067 INSL3P51460 131 aa20.05■□□□□ 0.8
LIMD2-203ENST00000578067 CITED1Q99966 193 aa20.05■□□□□ 0.8
LIMD2-203ENST00000578067 C2orf88Q9BSF0 95 aa20.05■□□□□ 0.8
LIMD2-203ENST00000578067 SLC25A34Q6PIV7 304 aa20.05■□□□□ 0.8
LIMD2-203ENST00000578067 IL17DQ8TAD2 202 aa20.05■□□□□ 0.8
LIMD2-203ENST00000578067 ZMAT5Q9UDW3 170 aaKnown RBP20.05■□□□□ 0.8
LIMD2-203ENST00000578067 RNASE8Q8TDE3 154 aaKnown RBP20.04■□□□□ 0.8
LIMD2-203ENST00000578067 C1QTNF4Q9BXJ3 329 aa20.04■□□□□ 0.8
LIMD2-203ENST00000578067 CYSLTR1Q9Y271 337 aa20.04■□□□□ 0.8
LIMD2-203ENST00000578067 MRPS16Q9Y3D3 137 aaKnown RBP20.04■□□□□ 0.8
LIMD2-203ENST00000578067 LINC01549A6NIU2 74 aa20.03■□□□□ 0.8
LIMD2-203ENST00000578067 STPG4Q8N801 248 aa20.03■□□□□ 0.8
LIMD2-203ENST00000578067 RHODO00212 210 aa20.03■□□□□ 0.8
LIMD2-203ENST00000578067 ANKRD39Q53RE8 183 aa20.03■□□□□ 0.8
LIMD2-203ENST00000578067 C9orf66Q5T8R8 295 aa20.03■□□□□ 0.8
LIMD2-203ENST00000578067 ERASQ7Z444 233 aa20.03■□□□□ 0.8
LIMD2-203ENST00000578067 NIPBLQ6KC79 2804 aaeCLIP20.02■□□□□ 0.8
LIMD2-203ENST00000578067 A0A087WX48 190 aa20.02■□□□□ 0.8
LIMD2-203ENST00000578067 RS1O15537 224 aa20.02■□□□□ 0.8
LIMD2-203ENST00000578067 LURAP1LQ8IV03 231 aa20.02■□□□□ 0.8
LIMD2-203ENST00000578067 DEFB104AQ8WTQ1 72 aa20.02■□□□□ 0.8
LIMD2-203ENST00000578067 TMEM263Q8WUH6 116 aaKnown RBP20.02■□□□□ 0.8
LIMD2-203ENST00000578067 TRAV12-1A0A0B4J245 112 aa20.02■□□□□ 0.79
LIMD2-203ENST00000578067 IGKCP01834 107 aa20.02■□□□□ 0.79
LIMD2-203ENST00000578067 DPM2O94777 84 aa20.01■□□□□ 0.79
LIMD2-203ENST00000578067 COX8AP10176 69 aa20■□□□□ 0.79
LIMD2-203ENST00000578067 RIPPLY3P57055 190 aa20■□□□□ 0.79
LIMD2-203ENST00000578067 TP53TG1Q9Y2A0 90 aa20■□□□□ 0.79
LIMD2-203ENST00000578067 SPATA3Q8NHX4 192 aa20■□□□□ 0.79
LIMD2-203ENST00000578067 MRPL35Q9NZE8 188 aaKnown RBP20■□□□□ 0.79
LIMD2-203ENST00000578067 I3L3M4 83 aa19.99■□□□□ 0.79
LIMD2-203ENST00000578067 CSNK1G2-AS1Q8NCQ2 148 aa19.99■□□□□ 0.79
LIMD2-203ENST00000578067 TP73-AS1Q9UF72 201 aa19.99■□□□□ 0.79
LIMD2-203ENST00000578067 RHOHQ15669 191 aa19.98■□□□□ 0.79
LIMD2-203ENST00000578067 NEXN-AS1Q8NBZ9 246 aa19.98■□□□□ 0.79
LIMD2-203ENST00000578067 HHLA3Q9XRX5 114 aa19.98■□□□□ 0.79
LIMD2-203ENST00000578067 P0DMU3 169 aa19.98■□□□□ 0.79
LIMD2-203ENST00000578067 FAM231AP0DMU4 169 aa19.98■□□□□ 0.79
LIMD2-203ENST00000578067 FAM231CP0DMU5 169 aa19.98■□□□□ 0.79
LIMD2-203ENST00000578067 Q6ZSN1 163 aa19.98■□□□□ 0.79
LIMD2-203ENST00000578067 GTSCR1Q86UQ5 136 aa19.98■□□□□ 0.79
LIMD2-203ENST00000578067 TSHBP01222 138 aa19.97■□□□□ 0.79
LIMD2-203ENST00000578067 BAALCQ8WXS3 180 aa19.97■□□□□ 0.79
LIMD2-203ENST00000578067 TRGV1A0A0A0MS02 117 aa19.97■□□□□ 0.79
LIMD2-203ENST00000578067 IGHV3-53P01767 116 aa19.96■□□□□ 0.79
LIMD2-203ENST00000578067 TNFRSF18Q9Y5U5 241 aa19.96■□□□□ 0.79
LIMD2-203ENST00000578067 IGIPA6NJ69 53 aa19.95■□□□□ 0.78
LIMD2-203ENST00000578067 RPL39P62891 51 aaKnown RBP19.95■□□□□ 0.78
LIMD2-203ENST00000578067 C16orf74Q96GX8 76 aa19.95■□□□□ 0.78
LIMD2-203ENST00000578067 F8VRH5 84 aa19.94■□□□□ 0.78
LIMD2-203ENST00000578067 PLNP26678 52 aa19.94■□□□□ 0.78
LIMD2-203ENST00000578067 BATFQ16520 125 aa19.94■□□□□ 0.78
LIMD2-203ENST00000578067 CHTOPQ9Y3Y2 248 aaKnown RBP19.94■□□□□ 0.78
LIMD2-203ENST00000578067 NACAE9PAV3 2078 aa19.94■□□□□ 0.78
LIMD2-203ENST00000578067 TMEM141Q96I45 108 aa19.93■□□□□ 0.78
LIMD2-203ENST00000578067 TCTAP57738 103 aa19.93■□□□□ 0.78
LIMD2-203ENST00000578067 DAZ2Q13117 558 aaKnown RBP19.93■□□□□ 0.78
LIMD2-203ENST00000578067 OR4C5Q8NGB2 326 aa19.93■□□□□ 0.78
LIMD2-203ENST00000578067 TIMM17AQ99595 171 aa19.93■□□□□ 0.78
LIMD2-203ENST00000578067 FGF6P10767 208 aa19.92■□□□□ 0.78
LIMD2-203ENST00000578067 Q6ZTI0 123 aa19.92■□□□□ 0.78
LIMD2-203ENST00000578067 DNAJC30Q96LL9 226 aa19.92■□□□□ 0.78
LIMD2-203ENST00000578067 JMJD1CQ15652 2540 aa19.91■□□□□ 0.78
LIMD2-203ENST00000578067 RRN3P1Q2M238 152 aa19.91■□□□□ 0.78
LIMD2-203ENST00000578067 ZC2HC1BQ5TFG8 222 aa19.91■□□□□ 0.78
LIMD2-203ENST00000578067 PRSS29PA6NIE9 313 aa19.9■□□□□ 0.78
LIMD2-203ENST00000578067 NOP10Q9NPE3 64 aaKnown RBP19.9■□□□□ 0.78
LIMD2-203ENST00000578067 Q9UF83 564 aa19.9■□□□□ 0.78
LIMD2-203ENST00000578067 A0A1B0GV90 55 aa19.9■□□□□ 0.78
LIMD2-203ENST00000578067 PLAC8L1A1L4L8 177 aa19.9■□□□□ 0.78
LIMD2-203ENST00000578067 C20orf203Q8NBC4 194 aa19.9■□□□□ 0.78
LIMD2-203ENST00000578067 NMUP48645 174 aa19.89■□□□□ 0.77
LIMD2-203ENST00000578067 BOD1L2Q8IYS8 172 aa19.89■□□□□ 0.77
LIMD2-203ENST00000578067 HINT1P49773 126 aaPredicted RBP19.87■□□□□ 0.77
LIMD2-203ENST00000578067 ZNF479Q96JC4 524 aa19.87■□□□□ 0.77
LIMD2-203ENST00000578067 F8P00451 2351 aa19.86■□□□□ 0.77
LIMD2-203ENST00000578067 TRAV4A0A0B4J268 109 aa19.86■□□□□ 0.77
LIMD2-203ENST00000578067 DLEU1O43261 78 aa19.86■□□□□ 0.77
LIMD2-203ENST00000578067 PMVKQ15126 192 aa19.86■□□□□ 0.77
LIMD2-203ENST00000578067 C2orf91Q6ZV80 131 aa19.86■□□□□ 0.77
LIMD2-203ENST00000578067 FLNBO75369 2602 aaKnown RBP19.85■□□□□ 0.77
LIMD2-203ENST00000578067 WFDC9Q8NEX5 89 aa19.85■□□□□ 0.77
LIMD2-203ENST00000578067 OVOL2Q9BRP0 275 aa19.85■□□□□ 0.77
LIMD2-203ENST00000578067 IGKV2D-26A0A0A0MRZ7 120 aa19.85■□□□□ 0.77
LIMD2-203ENST00000578067 PCP2Q8IVA1 136 aa19.85■□□□□ 0.77
LIMD2-203ENST00000578067 COL5A1-AS1Q5SY13 56 aa19.83■□□□□ 0.77
LIMD2-203ENST00000578067 CST9LQ9H4G1 147 aa19.83■□□□□ 0.77
LIMD2-203ENST00000578067 TENM1Q9UKZ4 2725 aa19.82■□□□□ 0.76
LIMD2-203ENST00000578067 MPV17L2Q567V2 206 aa19.81■□□□□ 0.76
LIMD2-203ENST00000578067 LINC00469Q8N7U9 141 aa19.81■□□□□ 0.76
LIMD2-203ENST00000578067 GAGE12BA1L429 117 aa19.8■□□□□ 0.76
LIMD2-203ENST00000578067 SIVA1O15304 175 aa19.8■□□□□ 0.76
LIMD2-203ENST00000578067 GAGE7O76087 117 aa19.8■□□□□ 0.76
LIMD2-203ENST00000578067 GAGE12FP0CL80 117 aa19.8■□□□□ 0.76
LIMD2-203ENST00000578067 GAGE12GP0CL81 117 aa19.8■□□□□ 0.76
LIMD2-203ENST00000578067 GAGE12IP0CL82 117 aa19.8■□□□□ 0.76
LIMD2-203ENST00000578067 C12orf54Q6X4T0 127 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms