RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 SUMO4Q6EEV6 95 aa7.17□□□□□ -1.26
CRLF3-202ENST00000577725 Q6ZWC4 215 aa7.17□□□□□ -1.26
CRLF3-202ENST00000577725 PRELID3AQ96N28 172 aa7.17□□□□□ -1.26
CRLF3-202ENST00000577725 TM2D3Q9BRN9 247 aa7.17□□□□□ -1.26
CRLF3-202ENST00000577725 KMT2AQ03164 3969 aa7.16□□□□□ -1.26
CRLF3-202ENST00000577725 SMIM9A6NGZ8 99 aa7.16□□□□□ -1.26
CRLF3-202ENST00000577725 F5H697 171 aa7.16□□□□□ -1.26
CRLF3-202ENST00000577725 RS1O15537 224 aa7.16□□□□□ -1.26
CRLF3-202ENST00000577725 DAZ2Q13117 558 aaKnown RBP7.16□□□□□ -1.26
CRLF3-202ENST00000577725 CFAP126Q5VTH2 177 aa7.16□□□□□ -1.26
CRLF3-202ENST00000577725 POM121L12Q8N7R1 296 aa7.16□□□□□ -1.26
CRLF3-202ENST00000577725 Q8NAQ8 132 aa7.16□□□□□ -1.26
CRLF3-202ENST00000577725 C18orf32Q8TCD1 76 aa7.16□□□□□ -1.26
CRLF3-202ENST00000577725 PTH2Q96A98 100 aa7.16□□□□□ -1.26
CRLF3-202ENST00000577725 RPL39LQ96EH5 51 aaKnown RBP7.16□□□□□ -1.26
CRLF3-202ENST00000577725 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 S100A6P06703 90 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 DEFB130BP0DP73 79 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 DEFB130AP0DP74 79 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 SNRPEP62304 92 aaKnown RBP7.15□□□□□ -1.26
CRLF3-202ENST00000577725 PDZD11Q5EBL8 140 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 UFSP1Q6NVU6 142 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 Q6ZSN1 163 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 ORMDL3Q8N138 153 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 RASL10AQ92737 203 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 ZNF479Q96JC4 524 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 CELA1Q9UNI1 258 aa7.15□□□□□ -1.26
CRLF3-202ENST00000577725 TRGV2A0A075B6R0 118 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 A8MWV9 139 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 NUPR1O60356 82 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 P0DMU3 169 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 FAM231AP0DMU4 169 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 FAM231CP0DMU5 169 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 MIFP14174 115 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 LINC00310P59036 64 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 FAM222AQ5U5X8 452 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 BAGE3Q86Y29 109 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 NRACQ8N912 160 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 OR4C5Q8NGB2 326 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
CRLF3-202ENST00000577725 TRAV4A0A0B4J268 109 aa7.13□□□□□ -1.27
CRLF3-202ENST00000577725 LOC105371267A0A1B0GV96 52 aa7.13□□□□□ -1.27
CRLF3-202ENST00000577725 SERF1AO75920 110 aa7.13□□□□□ -1.27
CRLF3-202ENST00000577725 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
CRLF3-202ENST00000577725 Q0VG73 95 aa7.13□□□□□ -1.27
CRLF3-202ENST00000577725 PIK3CD-AS1Q5SR53 167 aa7.13□□□□□ -1.27
CRLF3-202ENST00000577725 RNASEKQ6P5S7 137 aaKnown RBP7.13□□□□□ -1.27
CRLF3-202ENST00000577725 URB1-AS1Q96HZ7 61 aa7.13□□□□□ -1.27
CRLF3-202ENST00000577725 LGALS9BQ3B8N2 356 aa7.12□□□□□ -1.27
CRLF3-202ENST00000577725 OR10J3Q5JRS4 329 aa7.12□□□□□ -1.27
CRLF3-202ENST00000577725 NEGR1Q7Z3B1 354 aa7.12□□□□□ -1.27
CRLF3-202ENST00000577725 DEFB104AQ8WTQ1 72 aa7.12□□□□□ -1.27
CRLF3-202ENST00000577725 DKK2Q9UBU2 259 aa7.12□□□□□ -1.27
CRLF3-202ENST00000577725 Q9UF83 564 aa7.12□□□□□ -1.27
CRLF3-202ENST00000577725 TP53TG1Q9Y2A0 90 aa7.12□□□□□ -1.27
CRLF3-202ENST00000577725 C5orf52A6NGY3 159 aa7.11□□□□□ -1.27
CRLF3-202ENST00000577725 M0QY20 66 aa7.11□□□□□ -1.27
CRLF3-202ENST00000577725 RHODO00212 210 aa7.11□□□□□ -1.27
CRLF3-202ENST00000577725 PPBPP02775 128 aa7.11□□□□□ -1.27
CRLF3-202ENST00000577725 HOXA5P20719 270 aa7.11□□□□□ -1.27
CRLF3-202ENST00000577725 IFI27P40305 119 aaPredicted RBP7.11□□□□□ -1.27
CRLF3-202ENST00000577725 COA6Q5JTJ3 125 aaKnown RBP7.11□□□□□ -1.27
CRLF3-202ENST00000577725 NIT1Q86X76 327 aa7.11□□□□□ -1.27
CRLF3-202ENST00000577725 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
CRLF3-202ENST00000577725 MAP1LC3AQ9H492 121 aa7.11□□□□□ -1.27
CRLF3-202ENST00000577725 A0A0J9YWU9 116 aa7.1□□□□□ -1.27
CRLF3-202ENST00000577725 LYRM9A8MSI8 78 aa7.1□□□□□ -1.27
CRLF3-202ENST00000577725 PMCHP20382 165 aa7.1□□□□□ -1.27
CRLF3-202ENST00000577725 DAD1P61803 113 aa7.1□□□□□ -1.27
CRLF3-202ENST00000577725 PMCHL1Q16048 86 aa7.1□□□□□ -1.27
CRLF3-202ENST00000577725 FA2HQ7L5A8 372 aa7.1□□□□□ -1.27
CRLF3-202ENST00000577725 HIST3H2BBQ8N257 126 aa7.1□□□□□ -1.27
CRLF3-202ENST00000577725 PRSS3P2Q8NHM4 247 aa7.1□□□□□ -1.27
CRLF3-202ENST00000577725 SPATA25Q9BR10 227 aa7.1□□□□□ -1.27
CRLF3-202ENST00000577725 TRGV4A0A0C4DH28 118 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 LOC100131303A0A0U1RQF7 123 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 IFITM10A6NMD0 228 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 HTN3P15516 51 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 FHL2Q14192 279 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 ZFP2Q6ZN57 461 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 FAM19A2Q8N3H0 131 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 NDUFAF3Q9BU61 184 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 ST20Q9HBF5 79 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
CRLF3-202ENST00000577725 IGLV2-18A0A075B6J9 118 aa7.08□□□□□ -1.28
CRLF3-202ENST00000577725 K7EQD1 137 aa7.08□□□□□ -1.28
CRLF3-202ENST00000577725 TCAPO15273 167 aa7.08□□□□□ -1.28
CRLF3-202ENST00000577725 SPART-AS1P0CW21 52 aa7.08□□□□□ -1.28
CRLF3-202ENST00000577725 SUMO2P61956 95 aaKnown RBP7.08□□□□□ -1.28
CRLF3-202ENST00000577725 Q8N8P6 123 aa7.08□□□□□ -1.28
CRLF3-202ENST00000577725 NEXN-AS1Q8NBZ9 246 aa7.08□□□□□ -1.28
CRLF3-202ENST00000577725 SMIM2Q9BVW6 85 aa7.08□□□□□ -1.28
CRLF3-202ENST00000577725 GAGE12JA6NER3 117 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 SDHAF1A6NFY7 115 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 LINC00614P0C842 121 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 GAGE1Q13065 139 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 GAGE4Q13068 117 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 GAGE5Q13069 117 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 C12orf74Q32Q52 190 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms