RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 LGALS9O00182 355 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 LGALS3P17931 250 aaKnown RBP4.22□□□□□ -1.73
CTNS-210ENST00000576979 POLR2KP53803 58 aaKnown RBP4.22□□□□□ -1.73
CTNS-210ENST00000576979 GAGE2BQ13066 116 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 GAGE2EQ4V326 116 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 TMEM170BQ5T4T1 132 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 GAGE2AQ6NT46 116 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 TRPT1Q86TN4 253 aaKnown RBP4.22□□□□□ -1.73
CTNS-210ENST00000576979 DLX4Q92988 240 aaPredicted RBP4.22□□□□□ -1.73
CTNS-210ENST00000576979 C9orf85Q96MD7 179 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 GAGE2DQ9UEU5 116 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 KIF25-AS1Q9Y6Z4 181 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 NBASA2RRP1 2371 aa4.22□□□□□ -1.73
CTNS-210ENST00000576979 IGHV1OR15-1A0A075B7D0 117 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 IGHV4-30-2A0A087WSY4 118 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 IGHV3-16A0A0C4DH30 117 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 A0A0J9YX75 114 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 H3BMG7 143 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 ZNF688P0C7X2 276 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 SCGB1A1P11684 91 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 BLCAPP62952 87 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 NSUN5P1Q3KNT7 163 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 FAM74A4Q5TZK3 123 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 DCANP1Q8TF63 244 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 LINC00476Q8WZB0 136 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 PLEKHB2Q96CS7 222 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 SIGMAR1Q99720 223 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 SPAG8Q99932 426 aaPredicted RBP4.21□□□□□ -1.74
CTNS-210ENST00000576979 SPANXB1Q9NS25 103 aaPredicted RBP4.21□□□□□ -1.74
CTNS-210ENST00000576979 ZNF256Q9Y2P7 627 aaPredicted RBP4.21□□□□□ -1.74
CTNS-210ENST00000576979 MGAQ8IWI9 3026 aa4.21□□□□□ -1.74
CTNS-210ENST00000576979 LOC400499M0QZD8 3231 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 AKAP6Q13023 2319 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 IGLV4-69A0A075B6H9 119 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 LOC107984156A0A0G2JMH3 177 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 TRBV27A0A0K0K1C4 114 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 IGIPA6NJ69 53 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 TMEM238C9JI98 176 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 K7EQG2 157 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 LEPROTO15243 131 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 APOMO95445 188 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 IGKV3-20P01619 116 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 CRYGDP07320 174 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 COX6B1P14854 86 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 PSMB2P49721 201 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 UBE2D1P51668 147 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 LINC00315P59091 139 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 WFDC2Q14508 124 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 MORN3Q6PF18 240 aaPredicted RBP4.2□□□□□ -1.74
CTNS-210ENST00000576979 ARL17AQ8IVW1 177 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 ATP6V0E2Q8NHE4 81 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 JPT2Q9H910 190 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 TSSC4Q9Y5U2 329 aaPredicted RBP4.2□□□□□ -1.74
CTNS-210ENST00000576979 ZFHX4Q86UP3 3567 aa4.2□□□□□ -1.74
CTNS-210ENST00000576979 PRRC2AP48634 2157 aaKnown RBP4.2□□□□□ -1.74
CTNS-210ENST00000576979 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.2□□□□□ -1.74
CTNS-210ENST00000576979 NACAE9PAV3 2078 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 TRBV20-1A0A075B6N2 111 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 A0A0J9YY99 117 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 I3L3M4 83 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 J3QLI3 93 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 J3QQQ9 107 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 TSPAN13O95857 204 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 TSHBP01222 138 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 PSMB8P28062 276 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 EMP1P54849 157 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 RPL39P62891 51 aaKnown RBP4.19□□□□□ -1.74
CTNS-210ENST00000576979 SPINK13Q1W4C9 94 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 ETDBQ3ZM63 59 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 ZNF876PQ49A33 203 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 AMTNQ6UX39 209 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 NFE4Q86UQ8 179 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 KLHL30-AS1Q8NEE0 82 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 C1QTNF4Q9BXJ3 329 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 VCX2Q9H322 139 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 MDFICQ9P1T7 246 aa4.19□□□□□ -1.74
CTNS-210ENST00000576979 SPENQ96T58 3664 aaKnown RBP4.19□□□□□ -1.74
CTNS-210ENST00000576979 TRAV12-2A0A075B6T6 113 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 CYSRT1A8MQ03 144 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 M0QY20 66 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 SCGB1C2P0DMR2 95 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 AZU1P20160 251 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 DEFB112Q30KQ8 113 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 SH2D6Q7Z4S9 175 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 NDUFA11Q86Y39 141 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 SLC25A29Q8N8R3 303 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 C20orf203Q8NBC4 194 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 DUX5Q96PT3 197 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 PRO0461Q9UI25 63 aa4.18□□□□□ -1.74
CTNS-210ENST00000576979 IGF2RP11717 2491 aa4.17□□□□□ -1.74
CTNS-210ENST00000576979 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.17□□□□□ -1.74
CTNS-210ENST00000576979 TMEM223A0PJW6 202 aa4.17□□□□□ -1.74
CTNS-210ENST00000576979 A8MWV9 139 aa4.17□□□□□ -1.74
CTNS-210ENST00000576979 IGHV3-30P01768 117 aa4.17□□□□□ -1.74
CTNS-210ENST00000576979 IGHV4-59P01825 116 aa4.17□□□□□ -1.74
CTNS-210ENST00000576979 IGHV3-30-5P0DP03 117 aa4.17□□□□□ -1.74
CTNS-210ENST00000576979 CD28P10747 220 aa4.17□□□□□ -1.74
CTNS-210ENST00000576979 SYNJ2BPP57105 145 aa4.17□□□□□ -1.74
CTNS-210ENST00000576979 UBE2D3P61077 147 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms