RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 DNAJC30Q96LL9 226 aa11.63□□□□□ -0.55
ERCC4-208ENST00000576348 EDA2RQ9HAV5 297 aa11.63□□□□□ -0.55
ERCC4-208ENST00000576348 A0A0J9YY99 117 aa11.62□□□□□ -0.55
ERCC4-208ENST00000576348 GAS8-AS1O95177 125 aa11.62□□□□□ -0.55
ERCC4-208ENST00000576348 CRYBA4P53673 196 aa11.62□□□□□ -0.55
ERCC4-208ENST00000576348 TENM3Q9P273 2699 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 TRAV26-1A0A087WT03 109 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 LOC389332A0A1B0GUA5 103 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 GAGE12JA6NER3 117 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 GYPEP15421 78 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 GAGE1Q13065 139 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 GAGE4Q13068 117 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 GAGE5Q13069 117 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 GAGE13Q4V321 117 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 NRACQ8N912 160 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 C20orf78Q9BR46 151 aa11.61□□□□□ -0.55
ERCC4-208ENST00000576348 PMCHP20382 165 aa11.6□□□□□ -0.55
ERCC4-208ENST00000576348 SUMO2P61956 95 aaKnown RBP11.6□□□□□ -0.55
ERCC4-208ENST00000576348 BAGE3Q86Y29 109 aa11.6□□□□□ -0.55
ERCC4-208ENST00000576348 NEXN-AS1Q8NBZ9 246 aa11.6□□□□□ -0.55
ERCC4-208ENST00000576348 ZNRF2Q8NHG8 242 aa11.6□□□□□ -0.55
ERCC4-208ENST00000576348 PRSS3P2Q8NHM4 247 aa11.6□□□□□ -0.55
ERCC4-208ENST00000576348 TRBV7-3A0A075B6L6 115 aa11.59□□□□□ -0.55
ERCC4-208ENST00000576348 TRBV6-5A0A0K0K1A5 114 aa11.59□□□□□ -0.55
ERCC4-208ENST00000576348 IQCJQ1A5X6 159 aa11.59□□□□□ -0.55
ERCC4-208ENST00000576348 FA2HQ7L5A8 372 aa11.59□□□□□ -0.55
ERCC4-208ENST00000576348 LOC100131303A0A0U1RQF7 123 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 SDHAF1A6NFY7 115 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST1H2BKO60814 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST1H2BJP06899 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST1H2BOP23527 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST1H2BBP33778 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST1H2BDP58876 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST1H2BCP62807 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST2H2BEQ16778 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.58□□□□□ -0.56
ERCC4-208ENST00000576348 C18orf32Q8TCD1 76 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 PHLDA1Q8WV24 401 aaPredicted RBP11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST1H2BHQ93079 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST1H2BNQ99877 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 HIST1H2BMQ99879 126 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 TMA7Q9Y2S6 64 aaKnown RBP11.58□□□□□ -0.56
ERCC4-208ENST00000576348 ICOSQ9Y6W8 199 aa11.58□□□□□ -0.56
ERCC4-208ENST00000576348 VCYO14598 125 aa11.57□□□□□ -0.56
ERCC4-208ENST00000576348 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
ERCC4-208ENST00000576348 FBN3Q75N90 2809 aa11.56□□□□□ -0.56
ERCC4-208ENST00000576348 S100A6P06703 90 aa11.56□□□□□ -0.56
ERCC4-208ENST00000576348 FCER1GP30273 86 aa11.56□□□□□ -0.56
ERCC4-208ENST00000576348 MRPL23Q16540 153 aaKnown RBP11.56□□□□□ -0.56
ERCC4-208ENST00000576348 RNASEKQ6P5S7 137 aaKnown RBP11.56□□□□□ -0.56
ERCC4-208ENST00000576348 KIR2DL4Q99706 377 aa11.56□□□□□ -0.56
ERCC4-208ENST00000576348 TMEM70Q9BUB7 260 aa11.56□□□□□ -0.56
ERCC4-208ENST00000576348 NXT2Q9NPJ8 142 aaKnown RBP11.56□□□□□ -0.56
ERCC4-208ENST00000576348 I3L3M4 83 aa11.55□□□□□ -0.56
ERCC4-208ENST00000576348 NUDT3O95989 172 aa11.55□□□□□ -0.56
ERCC4-208ENST00000576348 IFI27P40305 119 aaPredicted RBP11.55□□□□□ -0.56
ERCC4-208ENST00000576348 NDUFA6P56556 154 aa11.55□□□□□ -0.56
ERCC4-208ENST00000576348 Q0VG73 95 aa11.55□□□□□ -0.56
ERCC4-208ENST00000576348 NEGR1Q7Z3B1 354 aa11.55□□□□□ -0.56
ERCC4-208ENST00000576348 SH2D6Q7Z4S9 175 aa11.55□□□□□ -0.56
ERCC4-208ENST00000576348 DAZ4Q86SG3 579 aaKnown RBP11.55□□□□□ -0.56
ERCC4-208ENST00000576348 Q8N8P6 123 aa11.55□□□□□ -0.56
ERCC4-208ENST00000576348 VSIG2Q96IQ7 327 aa11.55□□□□□ -0.56
ERCC4-208ENST00000576348 DAZ3Q9NR90 486 aaKnown RBP11.55□□□□□ -0.56
ERCC4-208ENST00000576348 Q9UF83 564 aa11.55□□□□□ -0.56
ERCC4-208ENST00000576348 IGHV3-38A0A0C4DH36 116 aa11.54□□□□□ -0.56
ERCC4-208ENST00000576348 UBE2D3P61077 147 aa11.54□□□□□ -0.56
ERCC4-208ENST00000576348 UBE2D2P62837 147 aa11.54□□□□□ -0.56
ERCC4-208ENST00000576348 RPL32P62910 135 aaKnown RBP11.54□□□□□ -0.56
ERCC4-208ENST00000576348 ATP6V0E2Q8NHE4 81 aa11.54□□□□□ -0.56
ERCC4-208ENST00000576348 H3BNG1 76 aa11.53□□□□□ -0.56
ERCC4-208ENST00000576348 TCAPO15273 167 aa11.53□□□□□ -0.56
ERCC4-208ENST00000576348 POLR2KP53803 58 aaKnown RBP11.53□□□□□ -0.56
ERCC4-208ENST00000576348 COTL1Q14019 142 aa11.53□□□□□ -0.56
ERCC4-208ENST00000576348 NIT1Q86X76 327 aa11.53□□□□□ -0.56
ERCC4-208ENST00000576348 STAB2Q8WWQ8 2551 aa11.52□□□□□ -0.56
ERCC4-208ENST00000576348 A0A096LPF7 62 aa11.52□□□□□ -0.57
ERCC4-208ENST00000576348 TRBV27A0A0K0K1C4 114 aa11.52□□□□□ -0.57
ERCC4-208ENST00000576348 PRSS47A8MTI9 375 aa11.52□□□□□ -0.57
ERCC4-208ENST00000576348 IGLL5B9A064 214 aa11.52□□□□□ -0.57
ERCC4-208ENST00000576348 AP5S1Q9NUS5 200 aa11.52□□□□□ -0.57
ERCC4-208ENST00000576348 NUPR2A6NF83 97 aa11.51□□□□□ -0.57
ERCC4-208ENST00000576348 LINC00614P0C842 121 aa11.51□□□□□ -0.57
ERCC4-208ENST00000576348 TMEM97Q5BJF2 176 aa11.51□□□□□ -0.57
ERCC4-208ENST00000576348 C15orf53Q8NAA6 179 aa11.51□□□□□ -0.57
ERCC4-208ENST00000576348 DEFB104AQ8WTQ1 72 aa11.51□□□□□ -0.57
ERCC4-208ENST00000576348 CHCHD1Q96BP2 118 aaKnown RBP11.51□□□□□ -0.57
ERCC4-208ENST00000576348 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
ERCC4-208ENST00000576348 HSBP1O75506 76 aa11.5□□□□□ -0.57
ERCC4-208ENST00000576348 SERF1AO75920 110 aa11.5□□□□□ -0.57
ERCC4-208ENST00000576348 AMTP48728 403 aa11.5□□□□□ -0.57
ERCC4-208ENST00000576348 LAGE3Q14657 143 aa11.5□□□□□ -0.57
ERCC4-208ENST00000576348 ORMDL2Q53FV1 153 aa11.5□□□□□ -0.57
ERCC4-208ENST00000576348 CEMP1Q6PRD7 247 aaPredicted RBP11.5□□□□□ -0.57
ERCC4-208ENST00000576348 K7EMI3 77 aa11.49□□□□□ -0.57
ERCC4-208ENST00000576348 LINC00694P0DN24 101 aa11.49□□□□□ -0.57
ERCC4-208ENST00000576348 NACAE9PAV3 2078 aa11.48□□□□□ -0.57
ERCC4-208ENST00000576348 IGLV2-18A0A075B6J9 118 aa11.48□□□□□ -0.57
ERCC4-208ENST00000576348 TSHBP01222 138 aa11.48□□□□□ -0.57
ERCC4-208ENST00000576348 GTSF1LQ9H1H1 148 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms