RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ESRGQ1W209 222 aa9.18□□□□□ -0.94
RPAIN-216ENST00000575599 COX19Q49B96 90 aa9.18□□□□□ -0.94
RPAIN-216ENST00000575599 ZNF575Q86XF7 245 aa9.18□□□□□ -0.94
RPAIN-216ENST00000575599 ZNRF2Q8NHG8 242 aa9.18□□□□□ -0.94
RPAIN-216ENST00000575599 TRGC1P0CF51 173 aa9.17□□□□□ -0.94
RPAIN-216ENST00000575599 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
RPAIN-216ENST00000575599 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
RPAIN-216ENST00000575599 SCRT2Q9NQ03 307 aa9.17□□□□□ -0.94
RPAIN-216ENST00000575599 BIRC6Q9NR09 4857 aa9.16□□□□□ -0.94
RPAIN-216ENST00000575599 IGHV3-73A0A0B4J1V6 119 aa9.16□□□□□ -0.94
RPAIN-216ENST00000575599 GYPEP15421 78 aa9.16□□□□□ -0.94
RPAIN-216ENST00000575599 Q6ZR54 194 aa9.16□□□□□ -0.94
RPAIN-216ENST00000575599 K7EQD1 137 aa9.15□□□□□ -0.94
RPAIN-216ENST00000575599 RS1O15537 224 aa9.15□□□□□ -0.94
RPAIN-216ENST00000575599 SRIP30626 198 aa9.15□□□□□ -0.94
RPAIN-216ENST00000575599 MRPL23Q16540 153 aaKnown RBP9.15□□□□□ -0.94
RPAIN-216ENST00000575599 CFAP126Q5VTH2 177 aa9.15□□□□□ -0.94
RPAIN-216ENST00000575599 AP1S3Q96PC3 154 aa9.15□□□□□ -0.94
RPAIN-216ENST00000575599 CNFNQ9BYD5 112 aa9.15□□□□□ -0.94
RPAIN-216ENST00000575599 MRPS16Q9Y3D3 137 aaKnown RBP9.15□□□□□ -0.94
RPAIN-216ENST00000575599 LOC100131303A0A0U1RQF7 123 aa9.14□□□□□ -0.95
RPAIN-216ENST00000575599 NBDYA0A0U1RRE5 68 aa9.14□□□□□ -0.95
RPAIN-216ENST00000575599 COLCA2A8K830 154 aa9.14□□□□□ -0.95
RPAIN-216ENST00000575599 RPS10P46783 165 aaKnown RBP9.14□□□□□ -0.95
RPAIN-216ENST00000575599 FRZBQ92765 325 aa9.14□□□□□ -0.95
RPAIN-216ENST00000575599 PTH2Q96A98 100 aa9.14□□□□□ -0.95
RPAIN-216ENST00000575599 YPEL4Q96NS1 127 aa9.14□□□□□ -0.95
RPAIN-216ENST00000575599 UPK3BQ9BT76 320 aa9.14□□□□□ -0.95
RPAIN-216ENST00000575599 Q9H8V8 135 aa9.14□□□□□ -0.95
RPAIN-216ENST00000575599 DNAH2Q9P225 4427 aa9.14□□□□□ -0.95
RPAIN-216ENST00000575599 A0A1B0GXF2 115 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 A8MWV9 139 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 RTL8CO15255 209 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 HLA-DQA1P01909 254 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 MT-ND6P03923 174 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 GATA1P15976 413 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-216ENST00000575599 RAB5AP20339 215 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 PIK3CD-AS1Q5SR53 167 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 NEGR1Q7Z3B1 354 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 MSRB1Q9NZV6 116 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 TRAPPC1Q9Y5R8 145 aa9.13□□□□□ -0.95
RPAIN-216ENST00000575599 NXPH4O95158 308 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 LINC00336Q6ZUF6 198 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 C14orf178Q8N769 122 aaPredicted RBP9.12□□□□□ -0.95
RPAIN-216ENST00000575599 TMEM191AQ9H0A3 160 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 CIDEAO60543 219 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 APCSP02743 223 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 MGPP08493 103 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 EVI2AP22794 236 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 FABP9Q0Z7S8 132 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 FAM74A4Q5TZK3 123 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 LYPD5Q6UWN5 251 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 TMEM136Q6ZRR5 245 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 SLC25A29Q8N8R3 303 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 JPT2Q9H910 190 aa9.12□□□□□ -0.95
RPAIN-216ENST00000575599 PRSS29PA6NIE9 313 aa9.11□□□□□ -0.95
RPAIN-216ENST00000575599 F5H697 171 aa9.11□□□□□ -0.95
RPAIN-216ENST00000575599 RHOHQ15669 191 aa9.11□□□□□ -0.95
RPAIN-216ENST00000575599 TTC32Q5I0X7 151 aa9.11□□□□□ -0.95
RPAIN-216ENST00000575599 PRADC1Q9BSG0 188 aa9.11□□□□□ -0.95
RPAIN-216ENST00000575599 SAMD10Q9BYL1 202 aa9.11□□□□□ -0.95
RPAIN-216ENST00000575599 MRPL18Q9H0U6 180 aaKnown RBP9.11□□□□□ -0.95
RPAIN-216ENST00000575599 A0A087WWL8 130 aa9.1□□□□□ -0.95
RPAIN-216ENST00000575599 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
RPAIN-216ENST00000575599 RHODO00212 210 aa9.1□□□□□ -0.95
RPAIN-216ENST00000575599 SIVA1O15304 175 aa9.1□□□□□ -0.95
RPAIN-216ENST00000575599 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
RPAIN-216ENST00000575599 KRTAP4-9Q9BYQ8 210 aa9.1□□□□□ -0.95
RPAIN-216ENST00000575599 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
RPAIN-216ENST00000575599 FAT2Q9NYQ8 4349 aa9.09□□□□□ -0.95
RPAIN-216ENST00000575599 ZNF56Q15929 161 aa9.09□□□□□ -0.95
RPAIN-216ENST00000575599 FAM104BQ5XKR9 115 aa9.09□□□□□ -0.95
RPAIN-216ENST00000575599 ZFP2Q6ZN57 461 aa9.09□□□□□ -0.95
RPAIN-216ENST00000575599 Q6ZSN1 163 aa9.09□□□□□ -0.95
RPAIN-216ENST00000575599 C6orf223Q8N319 242 aa9.09□□□□□ -0.95
RPAIN-216ENST00000575599 GATD1Q8NB37 220 aa9.09□□□□□ -0.95
RPAIN-216ENST00000575599 SH2D6Q7Z4S9 175 aa9.08□□□□□ -0.96
RPAIN-216ENST00000575599 C1orf196B1AJZ1 125 aa9.07□□□□□ -0.96
RPAIN-216ENST00000575599 TRGC2P03986 189 aa9.07□□□□□ -0.96
RPAIN-216ENST00000575599 RAB4AP20338 218 aa9.07□□□□□ -0.96
RPAIN-216ENST00000575599 CKS2P33552 79 aa9.07□□□□□ -0.96
RPAIN-216ENST00000575599 UFSP1Q6NVU6 142 aa9.07□□□□□ -0.96
RPAIN-216ENST00000575599 WFDC10BQ8IUB3 73 aa9.07□□□□□ -0.96
RPAIN-216ENST00000575599 HECTD4Q9Y4D8 3996 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 GAGE12JA6NER3 117 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 H7C1H1 209 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 CRYGDP07320 174 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 GAGE1Q13065 139 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 GAGE4Q13068 117 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 GAGE5Q13069 117 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 KIAA1644Q3SXP7 199 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 MRPL51Q4U2R6 128 aaKnown RBP9.06□□□□□ -0.96
RPAIN-216ENST00000575599 GAGE13Q4V321 117 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 MRAP2Q96G30 205 aa9.06□□□□□ -0.96
RPAIN-216ENST00000575599 DNAH17Q9UFH2 4485 aa9.05□□□□□ -0.96
RPAIN-216ENST00000575599 PPBPP02775 128 aa9.05□□□□□ -0.96
RPAIN-216ENST00000575599 ORMDL3Q8N138 153 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms