RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PSMG3Q9BT73 122 aaPredicted RBP5.68□□□□□ -1.5
SMG6-218ENST00000575454 DERL1Q9BUN8 251 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 VAX2Q9UIW0 290 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 KIF25-AS1Q9Y6Z4 181 aa5.68□□□□□ -1.5
SMG6-218ENST00000575454 MUC2Q02817 5179 aa5.67□□□□□ -1.5
SMG6-218ENST00000575454 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
SMG6-218ENST00000575454 SSNA1O43805 119 aa5.67□□□□□ -1.5
SMG6-218ENST00000575454 PRR3P79522 188 aaKnown RBP5.67□□□□□ -1.5
SMG6-218ENST00000575454 GAGE6Q13070 117 aa5.67□□□□□ -1.5
SMG6-218ENST00000575454 CLPSL2Q6UWE3 100 aa5.67□□□□□ -1.5
SMG6-218ENST00000575454 TNFSF18Q9UNG2 199 aa5.67□□□□□ -1.5
SMG6-218ENST00000575454 TMSB15BA0A087X1C1 80 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 IGHV1-24A0A0C4DH33 117 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 TRBV6-1A0A0K0K1D8 114 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 F5H697 171 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 INMT-MINDY4F8WBC2 141 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 CHTF8P0CG12 524 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 ATP6V0CP27449 155 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 UBE2G1P62253 170 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 IQCJQ1A5X6 159 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 ZNF674Q2M3X9 581 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 FMC1Q96HJ9 113 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 TCEAL7Q9BRU2 100 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 ZNF471Q9BX82 626 aaPredicted RBP5.66□□□□□ -1.5
SMG6-218ENST00000575454 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
SMG6-218ENST00000575454 IGLV10-54A0A075B6I4 117 aa5.65□□□□□ -1.5
SMG6-218ENST00000575454 A0A1B0GUV1 79 aa5.65□□□□□ -1.5
SMG6-218ENST00000575454 NDUFS6O75380 124 aaKnown RBP5.65□□□□□ -1.5
SMG6-218ENST00000575454 SLPIP03973 132 aa5.65□□□□□ -1.5
SMG6-218ENST00000575454 SMIM17P0DL12 118 aa5.65□□□□□ -1.5
SMG6-218ENST00000575454 RPS10P46783 165 aaKnown RBP5.65□□□□□ -1.5
SMG6-218ENST00000575454 MAJINQ3KP22 176 aa5.65□□□□□ -1.5
SMG6-218ENST00000575454 LINC00299Q6ZSB3 139 aa5.65□□□□□ -1.5
SMG6-218ENST00000575454 NTM-AS1Q6ZSK4 140 aa5.65□□□□□ -1.5
SMG6-218ENST00000575454 PKIGQ9Y2B9 76 aa5.65□□□□□ -1.5
SMG6-218ENST00000575454 CXCL1P09341 107 aa5.64□□□□□ -1.51
SMG6-218ENST00000575454 COX6A2Q02221 97 aa5.64□□□□□ -1.51
SMG6-218ENST00000575454 ODF1Q14990 250 aa5.64□□□□□ -1.51
SMG6-218ENST00000575454 SPANXN1Q5VSR9 72 aa5.64□□□□□ -1.51
SMG6-218ENST00000575454 STPG4Q8N801 248 aa5.64□□□□□ -1.51
SMG6-218ENST00000575454 FAM74A7A6NL05 159 aa5.63□□□□□ -1.51
SMG6-218ENST00000575454 H7C1H1 209 aa5.63□□□□□ -1.51
SMG6-218ENST00000575454 LTAP01374 205 aa5.63□□□□□ -1.51
SMG6-218ENST00000575454 UBE2G2P60604 165 aa5.63□□□□□ -1.51
SMG6-218ENST00000575454 C20orf203Q8NBC4 194 aa5.63□□□□□ -1.51
SMG6-218ENST00000575454 S100ZQ8WXG8 99 aa5.63□□□□□ -1.51
SMG6-218ENST00000575454 AQP10Q96PS8 301 aa5.63□□□□□ -1.51
SMG6-218ENST00000575454 NDUFA13Q9P0J0 144 aa5.63□□□□□ -1.51
SMG6-218ENST00000575454 IGKV2-24A0A0C4DH68 120 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 CTXND1A0A1B0GTU2 59 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 OR5AL1P0C617 328 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 SULT1A2P50226 295 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 RAB5CP51148 216 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 Q6ZRP5 223 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 OR10AG1Q8NH19 301 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 LYPD6BQ8NI32 183 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 AP1S3Q96PC3 154 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 MARVELD1Q9BSK0 173 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 TMEM243Q9BU79 118 aa5.62□□□□□ -1.51
SMG6-218ENST00000575454 SSBP4Q9BWG4 385 aaPredicted RBP5.62□□□□□ -1.51
SMG6-218ENST00000575454 FAM231BA6NCW3 169 aa5.61□□□□□ -1.51
SMG6-218ENST00000575454 UBE2L6O14933 153 aa5.61□□□□□ -1.51
SMG6-218ENST00000575454 SNAI2O43623 268 aa5.61□□□□□ -1.51
SMG6-218ENST00000575454 S100A9P06702 114 aaKnown RBP5.61□□□□□ -1.51
SMG6-218ENST00000575454 FHITP49789 147 aa5.61□□□□□ -1.51
SMG6-218ENST00000575454 SRSF9Q13242 221 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMG6-218ENST00000575454 PRSS3P2Q8NHM4 247 aa5.61□□□□□ -1.51
SMG6-218ENST00000575454 IGLV4-60A0A075B6I1 120 aa5.6□□□□□ -1.51
SMG6-218ENST00000575454 A0A0U1RQV1 116 aa5.6□□□□□ -1.51
SMG6-218ENST00000575454 GAGE12HA6NDE8 117 aa5.6□□□□□ -1.51
SMG6-218ENST00000575454 UPK1BO75841 260 aa5.6□□□□□ -1.51
SMG6-218ENST00000575454 C15orf56Q8N910 161 aa5.6□□□□□ -1.51
SMG6-218ENST00000575454 STOML3Q8TAV4 291 aa5.6□□□□□ -1.51
SMG6-218ENST00000575454 LPAP08519 4548 aa5.6□□□□□ -1.51
SMG6-218ENST00000575454 GVQW2A0A096LPI5 108 aaPredicted RBP5.59□□□□□ -1.51
SMG6-218ENST00000575454 BORCS7-ASMTA0A0B4J1R7 106 aa5.59□□□□□ -1.51
SMG6-218ENST00000575454 M0QY20 66 aa5.59□□□□□ -1.51
SMG6-218ENST00000575454 AKR1C3P42330 323 aa5.59□□□□□ -1.51
SMG6-218ENST00000575454 ZNF726P1Q15940 193 aa5.59□□□□□ -1.51
SMG6-218ENST00000575454 AKR1C8PQ5T2L2 129 aa5.59□□□□□ -1.51
SMG6-218ENST00000575454 CST9LP1Q5W188 147 aa5.59□□□□□ -1.51
SMG6-218ENST00000575454 PGLYRP4Q96LB8 373 aa5.59□□□□□ -1.51
SMG6-218ENST00000575454 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
SMG6-218ENST00000575454 MUC21A0A0G2JKD1 596 aa5.58□□□□□ -1.52
SMG6-218ENST00000575454 MUC21A0A140T8X8 626 aa5.58□□□□□ -1.52
SMG6-218ENST00000575454 SSTP61278 116 aa5.58□□□□□ -1.52
SMG6-218ENST00000575454 HIGD2BQ4VC39 106 aa5.58□□□□□ -1.52
SMG6-218ENST00000575454 ZNF664Q8N3J9 261 aa5.58□□□□□ -1.52
SMG6-218ENST00000575454 INO80EQ8NBZ0 244 aaPredicted RBP5.58□□□□□ -1.52
SMG6-218ENST00000575454 GFRA4Q9GZZ7 299 aa5.58□□□□□ -1.52
SMG6-218ENST00000575454 MED28Q9H204 178 aa5.58□□□□□ -1.52
SMG6-218ENST00000575454 A0A096LNI7 61 aa5.57□□□□□ -1.52
SMG6-218ENST00000575454 AMTP48728 403 aa5.57□□□□□ -1.52
SMG6-218ENST00000575454 NKX2-5P52952 324 aaPredicted RBP5.57□□□□□ -1.52
SMG6-218ENST00000575454 DEFA1P59665 94 aa5.57□□□□□ -1.52
SMG6-218ENST00000575454 DEFA3P59666 94 aa5.57□□□□□ -1.52
SMG6-218ENST00000575454 COTL1Q14019 142 aa5.57□□□□□ -1.52
SMG6-218ENST00000575454 RASL11AQ6T310 242 aa5.57□□□□□ -1.52
SMG6-218ENST00000575454 BAGE2Q86Y30 109 aa5.57□□□□□ -1.52
SMG6-218ENST00000575454 PSORS1C2Q9UIG4 136 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms