RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 TRAV2A0A0B4J234 112 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 XGP55808 180 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 RRN3P1Q2M238 152 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 TCTEX1D4Q5JR98 221 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 C9orf139Q6ZV77 190 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 GEMIN7Q9H840 131 aaKnown RBP6.43□□□□□ -1.38
RPAIN-215ENST00000575112 HIGD1BQ9P298 99 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 TP53TG1Q9Y2A0 90 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 TNFRSF18Q9Y5U5 241 aa6.43□□□□□ -1.38
RPAIN-215ENST00000575112 DUSP14O95147 198 aaKnown RBP6.42□□□□□ -1.38
RPAIN-215ENST00000575112 LGALS1P09382 135 aaKnown RBP6.42□□□□□ -1.38
RPAIN-215ENST00000575112 SLC25A16P16260 332 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 CEMP1Q6PRD7 247 aaPredicted RBP6.42□□□□□ -1.38
RPAIN-215ENST00000575112 SPATA25Q9BR10 227 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 F8W1H4 67 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 HTN3P15516 51 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 NSUN5P1Q3KNT7 163 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 Q8N8P6 123 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 A0A087WX48 190 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 RPL35AP18077 110 aaKnown RBP6.42□□□□□ -1.38
RPAIN-215ENST00000575112 MEIG1Q5JSS6 88 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 Q8N6K4 173 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 MRAP2Q96G30 205 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 CARD19Q96LW7 228 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 SMPXQ9UHP9 88 aa6.42□□□□□ -1.38
RPAIN-215ENST00000575112 IGHV4OR15-8A0A075B7B6 117 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 A0A087WW49 117 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 PROK1P58294 105 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 RAX2Q96IS3 184 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 DPH3P1Q9H4G8 78 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 CRIP2P52943 208 aaPredicted RBP6.41□□□□□ -1.38
RPAIN-215ENST00000575112 RASL10AQ92737 203 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 SPXQ9BT56 116 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 YAE1D1Q9NRH1 226 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 SDHAF1A6NFY7 115 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 OVOL1O14753 267 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 HOXD3P31249 432 aaPredicted RBP6.41□□□□□ -1.38
RPAIN-215ENST00000575112 FOXI1Q12951 378 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 PRADC1Q9BSG0 188 aa6.41□□□□□ -1.38
RPAIN-215ENST00000575112 NBEAL1Q6ZS30 2694 aa6.4□□□□□ -1.38
RPAIN-215ENST00000575112 TMEM262E9PQX1 116 aa6.4□□□□□ -1.38
RPAIN-215ENST00000575112 CNFNQ9BYD5 112 aa6.4□□□□□ -1.38
RPAIN-215ENST00000575112 TSPAN13O95857 204 aa6.4□□□□□ -1.38
RPAIN-215ENST00000575112 SPINK8P0C7L1 97 aa6.4□□□□□ -1.38
RPAIN-215ENST00000575112 RPL13AP40429 203 aaKnown RBP6.4□□□□□ -1.38
RPAIN-215ENST00000575112 TSPEAR-AS2P59090 65 aa6.4□□□□□ -1.38
RPAIN-215ENST00000575112 PIFOQ8TCI5 191 aa6.4□□□□□ -1.38
RPAIN-215ENST00000575112 SMIM2Q9BVW6 85 aa6.4□□□□□ -1.38
RPAIN-215ENST00000575112 VCX2Q9H322 139 aa6.4□□□□□ -1.38
RPAIN-215ENST00000575112 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.39
RPAIN-215ENST00000575112 FAM223BA6NKX1 122 aa6.4□□□□□ -1.39
RPAIN-215ENST00000575112 NDUFA4O00483 81 aa6.4□□□□□ -1.39
RPAIN-215ENST00000575112 FAM223AQ8IWN6 122 aa6.4□□□□□ -1.39
RPAIN-215ENST00000575112 C11orf68Q9H3H3 251 aaKnown RBP6.4□□□□□ -1.39
RPAIN-215ENST00000575112 MGAM2Q2M2H8 2515 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 TRGV2A0A075B6R0 118 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 RNF183Q96D59 192 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 BBC3Q96PG8 261 aaPredicted RBP6.39□□□□□ -1.39
RPAIN-215ENST00000575112 ZNF580Q9UK33 172 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 LINC01546A6NGU7 62 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 LINC01559Q495D7 138 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 LINC01356Q8N9X3 169 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 ELANEP08246 267 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 C19orf54Q5BKX5 351 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 Q8N1Y9 231 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 BAALCQ8WXS3 180 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 USMG5Q96IX5 58 aa6.39□□□□□ -1.39
RPAIN-215ENST00000575112 TCL1BO95988 128 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 CRYGDP07320 174 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 CD28P10747 220 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 COX8CQ7Z4L0 72 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 F8VRH5 84 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 EIF4EBP3O60516 100 aaPredicted RBP6.38□□□□□ -1.39
RPAIN-215ENST00000575112 PPP1R17O96001 155 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 TRPT1Q86TN4 253 aaKnown RBP6.38□□□□□ -1.39
RPAIN-215ENST00000575112 TMEM190Q8WZ59 177 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 PRORYQ9H606 182 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 UBE2L6O14933 153 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 TSHBP01222 138 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 EBI3Q14213 229 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 ZFAND2AQ8N6M9 145 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 OR13C6PQ8NH95 151 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 SS18L2Q9UHA2 77 aa6.38□□□□□ -1.39
RPAIN-215ENST00000575112 SETXQ7Z333 2677 aaKnown RBP6.38□□□□□ -1.39
RPAIN-215ENST00000575112 TRGV1A0A0A0MS02 117 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 C11orf86A6NJI1 115 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 IGHG2P01859 326 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 NEXN-AS1Q8NBZ9 246 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 MAST4O15021 2626 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 Q6ZUT4 128 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 H7C1H1 209 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 SUMO4Q6EEV6 95 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 WFDC11Q8NEX6 87 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 C1QTNF4Q9BXJ3 329 aa6.37□□□□□ -1.39
RPAIN-215ENST00000575112 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.36□□□□□ -1.39
RPAIN-215ENST00000575112 A0A096LPF7 62 aa6.36□□□□□ -1.39
RPAIN-215ENST00000575112 TRAV13-1A0A0B4J241 112 aa6.36□□□□□ -1.39
RPAIN-215ENST00000575112 IGKV2-29A2NJV5 120 aaPredicted RBP6.36□□□□□ -1.39
RPAIN-215ENST00000575112 ORMDL2Q53FV1 153 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms