RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 SNRPD3P62318 126 aaKnown RBP11.75□□□□□ -0.53
SMPD3-212ENST00000574662 RNF151Q2KHN1 245 aa11.75□□□□□ -0.53
SMPD3-212ENST00000574662 ODF3L2Q3SX64 289 aa11.75□□□□□ -0.53
SMPD3-212ENST00000574662 SAMD13Q5VXD3 122 aa11.75□□□□□ -0.53
SMPD3-212ENST00000574662 A0A1W2PPM0 123 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 G3V4G9 280 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 PPP1R17O96001 155 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 TAL2Q16559 108 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 APRG1Q8IVJ8 170 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 MAP6D1Q9H9H5 199 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 MRPL35Q9NZE8 188 aaKnown RBP11.74□□□□□ -0.53
SMPD3-212ENST00000574662 GCSHP23434 173 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 S100A4P26447 101 aaKnown RBP11.74□□□□□ -0.53
SMPD3-212ENST00000574662 KRTAP10-11P60412 298 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 GTSCR1Q86UQ5 136 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 C19orf73Q9NVV2 129 aa11.74□□□□□ -0.53
SMPD3-212ENST00000574662 TRBV25-1A0A075B6N4 114 aa11.73□□□□□ -0.53
SMPD3-212ENST00000574662 FABP2P12104 132 aa11.73□□□□□ -0.53
SMPD3-212ENST00000574662 SUMO2P61956 95 aaKnown RBP11.73□□□□□ -0.53
SMPD3-212ENST00000574662 F8VRH5 84 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 H7C1H1 209 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 FBN3Q75N90 2809 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 TOMM6Q96B49 74 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 VPS25Q9BRG1 176 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 TM2D2Q9BX73 214 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 PHLDA3Q9Y5J5 127 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 SPCS1Q9Y6A9 102 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 KNCNA6PVL3 124 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 SAMD5Q5TGI4 173 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 CEND1Q8N111 149 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 RAB37Q96AX2 223 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
SMPD3-212ENST00000574662 EGFEM1PQ0D2K5 195 aa11.71□□□□□ -0.54
SMPD3-212ENST00000574662 C21orf62-AS1Q17RA5 79 aa11.71□□□□□ -0.54
SMPD3-212ENST00000574662 A0A0J9YX75 114 aa11.7□□□□□ -0.54
SMPD3-212ENST00000574662 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
SMPD3-212ENST00000574662 OR11H12B2RN74 326 aa11.7□□□□□ -0.54
SMPD3-212ENST00000574662 NXPH4O95158 308 aa11.7□□□□□ -0.54
SMPD3-212ENST00000574662 FXYD2P54710 66 aa11.7□□□□□ -0.54
SMPD3-212ENST00000574662 ANXA2RQ3ZCQ2 193 aa11.7□□□□□ -0.54
SMPD3-212ENST00000574662 Q6ZQT7 251 aa11.7□□□□□ -0.54
SMPD3-212ENST00000574662 RASL10AQ92737 203 aa11.7□□□□□ -0.54
SMPD3-212ENST00000574662 J3KRW8 73 aa11.69□□□□□ -0.54
SMPD3-212ENST00000574662 Q8N1Y9 231 aa11.69□□□□□ -0.54
SMPD3-212ENST00000574662 SCGB3A1Q96QR1 104 aa11.69□□□□□ -0.54
SMPD3-212ENST00000574662 POM121L12Q8N7R1 296 aa11.69□□□□□ -0.54
SMPD3-212ENST00000574662 CHTOPQ9Y3Y2 248 aaKnown RBP11.69□□□□□ -0.54
SMPD3-212ENST00000574662 MGPP08493 103 aa11.68□□□□□ -0.54
SMPD3-212ENST00000574662 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
SMPD3-212ENST00000574662 RPL32P62910 135 aaKnown RBP11.68□□□□□ -0.54
SMPD3-212ENST00000574662 FOXI2Q6ZQN5 318 aa11.68□□□□□ -0.54
SMPD3-212ENST00000574662 FAM110AQ9BQ89 295 aa11.68□□□□□ -0.54
SMPD3-212ENST00000574662 TTTY13Q9BZ97 58 aa11.68□□□□□ -0.54
SMPD3-212ENST00000574662 AGRNO00468 2067 aa11.68□□□□□ -0.54
SMPD3-212ENST00000574662 MGAM2Q2M2H8 2515 aa11.68□□□□□ -0.54
SMPD3-212ENST00000574662 H3BMM0 161 aa11.67□□□□□ -0.54
SMPD3-212ENST00000574662 IGKV3-20P01619 116 aa11.67□□□□□ -0.54
SMPD3-212ENST00000574662 RNASE4P34096 147 aaKnown RBP11.67□□□□□ -0.54
SMPD3-212ENST00000574662 NEXN-AS1Q8NBZ9 246 aa11.67□□□□□ -0.54
SMPD3-212ENST00000574662 COTL1Q14019 142 aa11.67□□□□□ -0.54
SMPD3-212ENST00000574662 C14orf178Q8N769 122 aaPredicted RBP11.67□□□□□ -0.54
SMPD3-212ENST00000574662 OR11H2Q8NH07 326 aa11.67□□□□□ -0.54
SMPD3-212ENST00000574662 NAA38Q9BRA0 125 aaKnown RBP11.67□□□□□ -0.54
SMPD3-212ENST00000574662 DNAH3Q8TD57 4116 aa11.66□□□□□ -0.54
SMPD3-212ENST00000574662 PHLDA1Q8WV24 401 aaPredicted RBP11.66□□□□□ -0.54
SMPD3-212ENST00000574662 NHP2Q9NX24 153 aaKnown RBP11.66□□□□□ -0.54
SMPD3-212ENST00000574662 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.54
SMPD3-212ENST00000574662 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.54
SMPD3-212ENST00000574662 KLLNB2CW77 178 aa11.65□□□□□ -0.54
SMPD3-212ENST00000574662 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.54
SMPD3-212ENST00000574662 RNASE3P12724 160 aaKnown RBP11.65□□□□□ -0.54
SMPD3-212ENST00000574662 C2orf66Q6UXQ4 117 aa11.65□□□□□ -0.54
SMPD3-212ENST00000574662 NEGR1Q7Z3B1 354 aa11.65□□□□□ -0.54
SMPD3-212ENST00000574662 RPL39LQ96EH5 51 aaKnown RBP11.65□□□□□ -0.54
SMPD3-212ENST00000574662 NOTCH1P46531 2555 aa11.64□□□□□ -0.55
SMPD3-212ENST00000574662 NBEAL1Q6ZS30 2694 aa11.64□□□□□ -0.55
SMPD3-212ENST00000574662 MYMXA0A1B0GTQ4 84 aa11.64□□□□□ -0.55
SMPD3-212ENST00000574662 A8MTW9 85 aa11.64□□□□□ -0.55
SMPD3-212ENST00000574662 AMTNQ6UX39 209 aa11.64□□□□□ -0.55
SMPD3-212ENST00000574662 MAPKAPK5-AS1Q8N8E1 139 aa11.64□□□□□ -0.55
SMPD3-212ENST00000574662 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
SMPD3-212ENST00000574662 ODF3Q96PU9 254 aa11.64□□□□□ -0.55
SMPD3-212ENST00000574662 DUSP14O95147 198 aaKnown RBP11.63□□□□□ -0.55
SMPD3-212ENST00000574662 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
SMPD3-212ENST00000574662 HIST1H4GQ99525 98 aa11.63□□□□□ -0.55
SMPD3-212ENST00000574662 E9PLD3 99 aa11.62□□□□□ -0.55
SMPD3-212ENST00000574662 PRB2P02812 416 aaPredicted RBP11.62□□□□□ -0.55
SMPD3-212ENST00000574662 PAPPA-AS1Q5QFB9 102 aa11.62□□□□□ -0.55
SMPD3-212ENST00000574662 KPRPQ5T749 579 aaPredicted RBP11.62□□□□□ -0.55
SMPD3-212ENST00000574662 TRPT1Q86TN4 253 aaKnown RBP11.62□□□□□ -0.55
SMPD3-212ENST00000574662 STHQ8IWL8 128 aa11.62□□□□□ -0.55
SMPD3-212ENST00000574662 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
SMPD3-212ENST00000574662 CYSLTR1Q9Y271 337 aa11.62□□□□□ -0.55
SMPD3-212ENST00000574662 TRBV7-3A0A075B6L6 115 aa11.62□□□□□ -0.55
SMPD3-212ENST00000574662 K7ERJ3 54 aa11.62□□□□□ -0.55
SMPD3-212ENST00000574662 GNRH2O43555 120 aa11.62□□□□□ -0.55
SMPD3-212ENST00000574662 RPL35AP18077 110 aaKnown RBP11.61□□□□□ -0.55
SMPD3-212ENST00000574662 KIF25-AS1Q9Y6Z4 181 aa11.61□□□□□ -0.55
SMPD3-212ENST00000574662 A0A1B0GWB2 263 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms