RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 SSBP4Q9BWG4 385 aaPredicted RBP8.09□□□□□ -1.11
CCDC40-210ENST00000573903 SAMD10Q9BYL1 202 aa8.09□□□□□ -1.11
CCDC40-210ENST00000573903 RPP21Q9H633 154 aaKnown RBP8.09□□□□□ -1.11
CCDC40-210ENST00000573903 FAM30AQ9NZY2 134 aa8.09□□□□□ -1.11
CCDC40-210ENST00000573903 K7EN84 100 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 LECT2O14960 151 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 IGLC6P0CF74 106 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 SMIM17P0DL12 118 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 GZMBP10144 247 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 CACNG7P62955 275 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 ZNF56Q15929 161 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 KCNIP4Q6PIL6 250 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 DAZ4Q86SG3 579 aaKnown RBP8.08□□□□□ -1.12
CCDC40-210ENST00000573903 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 OCC1Q8TAD7 63 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 DAZ3Q9NR90 486 aaKnown RBP8.08□□□□□ -1.12
CCDC40-210ENST00000573903 HERC1Q15751 4861 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 FAT1Q14517 4588 aa8.08□□□□□ -1.12
CCDC40-210ENST00000573903 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
CCDC40-210ENST00000573903 ZNF727A8MUV8 499 aa8.07□□□□□ -1.12
CCDC40-210ENST00000573903 F2Z2F3 143 aa8.07□□□□□ -1.12
CCDC40-210ENST00000573903 SRP19P09132 144 aaKnown RBP8.07□□□□□ -1.12
CCDC40-210ENST00000573903 LINC00694P0DN24 101 aa8.07□□□□□ -1.12
CCDC40-210ENST00000573903 WFDC2Q14508 124 aa8.07□□□□□ -1.12
CCDC40-210ENST00000573903 Q8N3U1 123 aa8.07□□□□□ -1.12
CCDC40-210ENST00000573903 NUDT10Q8NFP7 164 aa8.07□□□□□ -1.12
CCDC40-210ENST00000573903 NUDT11Q96G61 164 aa8.07□□□□□ -1.12
CCDC40-210ENST00000573903 RNASE7Q9H1E1 156 aaKnown RBP8.07□□□□□ -1.12
CCDC40-210ENST00000573903 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 IGKV2D-24A0A075B6R9 120 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 MUC21A0A0G2JKD1 596 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 TRBV10-1A0A0K0K1A3 114 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 MUC21A0A140T8X8 626 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 RAB14P61106 215 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 PEA15Q15121 130 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 FAM74A3Q4VXF1 159 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 Q6ZSA8 131 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 FAM231DQ6ZW35 169 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 C14orf178Q8N769 122 aaPredicted RBP8.06□□□□□ -1.12
CCDC40-210ENST00000573903 DEFB104AQ8WTQ1 72 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 SMDT1Q9H4I9 107 aa8.06□□□□□ -1.12
CCDC40-210ENST00000573903 A0A087WX48 190 aa8.05□□□□□ -1.12
CCDC40-210ENST00000573903 GATCO43716 136 aaKnown RBP8.05□□□□□ -1.12
CCDC40-210ENST00000573903 TRGC1P0CF51 173 aa8.05□□□□□ -1.12
CCDC40-210ENST00000573903 CTRLP40313 264 aa8.05□□□□□ -1.12
CCDC40-210ENST00000573903 RAB4BP61018 213 aa8.05□□□□□ -1.12
CCDC40-210ENST00000573903 SSTP61278 116 aa8.05□□□□□ -1.12
CCDC40-210ENST00000573903 RPL36AP83881 106 aaKnown RBP8.05□□□□□ -1.12
CCDC40-210ENST00000573903 ELOBQ15370 118 aa8.05□□□□□ -1.12
CCDC40-210ENST00000573903 LINC01551Q86U37 167 aa8.05□□□□□ -1.12
CCDC40-210ENST00000573903 Q8N976 141 aa8.05□□□□□ -1.12
CCDC40-210ENST00000573903 BAALCQ8WXS3 180 aa8.05□□□□□ -1.12
CCDC40-210ENST00000573903 RPL36ALQ969Q0 106 aaKnown RBP8.05□□□□□ -1.12
CCDC40-210ENST00000573903 F5H697 171 aa8.04□□□□□ -1.12
CCDC40-210ENST00000573903 CT83Q5H943 113 aa8.04□□□□□ -1.12
CCDC40-210ENST00000573903 LYZL1Q6UWQ5 148 aa8.04□□□□□ -1.12
CCDC40-210ENST00000573903 MYCBP2O75592 4640 aa8.03□□□□□ -1.12
CCDC40-210ENST00000573903 A8MWL6 223 aa8.03□□□□□ -1.12
CCDC40-210ENST00000573903 MGPP08493 103 aa8.03□□□□□ -1.12
CCDC40-210ENST00000573903 NIT1Q86X76 327 aa8.03□□□□□ -1.12
CCDC40-210ENST00000573903 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-210ENST00000573903 UBE2WQ96B02 151 aa8.03□□□□□ -1.12
CCDC40-210ENST00000573903 BORCS7Q96B45 105 aa8.03□□□□□ -1.12
CCDC40-210ENST00000573903 CHCHD7Q9BUK0 85 aa8.03□□□□□ -1.12
CCDC40-210ENST00000573903 KLK12Q9UKR0 248 aa8.03□□□□□ -1.12
CCDC40-210ENST00000573903 SRRM2Q9UQ35 2752 aaKnown RBP8.02□□□□□ -1.13
CCDC40-210ENST00000573903 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-210ENST00000573903 H7C1H1 209 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 Q0VG73 95 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 TMEM241Q24JQ0 296 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 WDR73Q6P4I2 378 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 SCXQ7RTU7 201 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 C15orf54Q8N8G6 183 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 OR10G8Q8NGN5 311 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 CNFNQ9BYD5 112 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 DPH3P1Q9H4G8 78 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 NAT8Q9UHE5 227 aa8.02□□□□□ -1.13
CCDC40-210ENST00000573903 TRBV7-3A0A075B6L6 115 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 CRPP02741 224 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 NTF3P20783 257 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 ADIRFQ15847 76 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 LINC01620Q4KN68 170 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 SMIM15Q7Z3B0 74 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 OSTCQ9NRP0 149 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 Q9UF83 564 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 KIF25-AS1Q9Y6Z4 181 aa8.01□□□□□ -1.13
CCDC40-210ENST00000573903 UBE2D3P61077 147 aa8□□□□□ -1.13
CCDC40-210ENST00000573903 UBE2D2P62837 147 aa8□□□□□ -1.13
CCDC40-210ENST00000573903 SRSF3P84103 164 aaKnown RBP8□□□□□ -1.13
CCDC40-210ENST00000573903 TWIST1Q15672 202 aa8□□□□□ -1.13
CCDC40-210ENST00000573903 NEXN-AS1Q8NBZ9 246 aa8□□□□□ -1.13
CCDC40-210ENST00000573903 TSKUQ8WUA8 353 aa8□□□□□ -1.13
CCDC40-210ENST00000573903 ISOC2Q96AB3 205 aa8□□□□□ -1.13
CCDC40-210ENST00000573903 CHAC1Q9BUX1 264 aa8□□□□□ -1.13
CCDC40-210ENST00000573903 C1orf43Q9BWL3 253 aa8□□□□□ -1.13
CCDC40-210ENST00000573903 GFRA4Q9GZZ7 299 aa8□□□□□ -1.13
CCDC40-210ENST00000573903 FAM231BA6NCW3 169 aa7.99□□□□□ -1.13
CCDC40-210ENST00000573903 C9JQL5 133 aa7.99□□□□□ -1.13
CCDC40-210ENST00000573903 TMEM262E9PQX1 116 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms