RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 NSG2Q9Y328 171 aa4.35□□□□□ -1.71
CACNA1A-203ENST00000573891 KLF12Q9Y4X4 402 aa4.35□□□□□ -1.71
CACNA1A-203ENST00000573891 TRAV18A0A075B6X5 111 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 MUC21A0A0G2JKD1 596 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 MUC21A0A140T8X8 626 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 FAM236DA0A1B0GTK5 79 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 ZNF727A8MUV8 499 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 UQCRQO14949 82 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 RTL8CO15255 209 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 DPM2O94777 84 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 DUSP14O95147 198 aaKnown RBP4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 NDUFC2O95298 119 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 APOHP02749 345 aaPredicted RBP4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 FAM236CP0DP71 79 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 MIFP14174 115 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 HERV-K104P61576 105 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 HERVK_113P63121 156 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 TTC32Q5I0X7 151 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 MUC21Q5SSG8 566 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 PVRIGQ6DKI7 326 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 HRCT1Q6UXD1 115 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 Q6ZRU5 148 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 EXOC3-AS1Q8N2X6 119 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 OR5H2Q8NGV7 314 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 DPH3Q96FX2 82 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 SPCS1Q9Y6A9 102 aa4.34□□□□□ -1.71
CACNA1A-203ENST00000573891 HSPG2P98160 4391 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 TRAV9-1A0A075B6T8 112 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 A0A0U1RQV1 116 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 J3QQQ9 107 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 NDUFB4O95168 129 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 CXorf1O96002 111 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 SLC25A5P05141 298 aaKnown RBP4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 EIF4EP06730 217 aaKnown RBP4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 FABP2P12104 132 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 CYCSP99999 105 aaKnown RBP4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 SSBP1Q04837 148 aaKnown RBP4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 ZNF506Q5JVG8 444 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 C3orf22Q8N5N4 141 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 POM121L12Q8N7R1 296 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 CSNK1G2-AS1Q8NCQ2 148 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 LINC01600Q96MT4 127 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 AP1S3Q96PC3 154 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 KRTAP4-5Q9BYR2 181 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 LAMTOR3Q9UHA4 124 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 ANAPC10Q9UM13 185 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 CELA1Q9UNI1 258 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 PXMP4Q9Y6I8 212 aa4.33□□□□□ -1.72
CACNA1A-203ENST00000573891 DEFB131BA0A096LNP1 70 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 IGHV3-66A0A0C4DH42 116 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 SYS1-DBNDD2H3BUS1 97 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 K7EQG2 157 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 ISLRO14498 428 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 IGHV3-48P01763 117 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 PRCDQ00LT1 54 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 C12orf74Q32Q52 190 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 LGALS9BQ3B8N2 356 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 Q6ZR54 194 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 SPATA12Q7Z6I5 190 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 SCGB1C1Q8TD33 95 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 ZNF503Q96F45 646 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 CARD19Q96LW7 228 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 NMES1Q9C002 83 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 IMUPQ9GZP8 106 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 MTFP1Q9UDX5 166 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 TP53TG3Q9ULZ0 132 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 PKIGQ9Y2B9 76 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 PYGO1Q9Y3Y4 419 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 AGRNO00468 2067 aa4.32□□□□□ -1.72
CACNA1A-203ENST00000573891 LRP1BQ9NZR2 4599 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 TRAV1-1A0A0B4J248 108 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 A0A1W2PS18 150 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 KNCNA6PVL3 124 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 INS-IGF2F8WCM5 200 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 M0R2N4 97 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 IGKV1-39P01597 117 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 IGKV1D-39P04432 117 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 OR5AL1P0C617 328 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 ZNF688P0C7X2 276 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 BCL2P10415 239 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 FAUP35544 74 aaKnown RBP4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 SLC25A34Q6PIV7 304 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 DCANP1Q8TF63 244 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 GTSF1Q8WW33 167 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 C8orf49Q96NF6 230 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 C20orf78Q9BR46 151 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 SDF2L1Q9HCN8 221 aa4.31□□□□□ -1.72
CACNA1A-203ENST00000573891 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 TRBV7-7A0A0K0K1E9 115 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 NUPR1O60356 82 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 IGKV1-17P01599 117 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 P0C879 139 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 NPPCP23582 126 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 FOXA3P55318 350 aaPredicted RBP4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 ERHP84090 104 aaKnown RBP4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 ZNF90Q03938 601 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 PHLDA2Q53GA4 152 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 ZNF575Q86XF7 245 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 TMEM256Q8N2U0 113 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 PPP1R1CQ8WVI7 109 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms