RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 CFHR3Q02985 330 aa7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 RNASE6Q93091 150 aaKnown RBP7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 KAAG1Q9UBP8 84 aa7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 TRBV7-6A0A0J9YX20 115 aa7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 RPL27AP46776 148 aaKnown RBP7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 ATP5EP56381 51 aaPredicted RBP7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 HILS1P60008 231 aa7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 MRGPRG-AS1Q2M3A8 158 aa7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 TMEM14CQ9P0S9 112 aa7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 EPG5Q9HCE0 2579 aa7.91□□□□□ -1.14
CHRNB1-205ENST00000573209 ACACAQ13085 2346 aa7.9□□□□□ -1.14
CHRNB1-205ENST00000573209 PLAC8L1A1L4L8 177 aa7.9□□□□□ -1.14
CHRNB1-205ENST00000573209 FAM223BA6NKX1 122 aa7.9□□□□□ -1.14
CHRNB1-205ENST00000573209 H3BTX0 84 aa7.9□□□□□ -1.14
CHRNB1-205ENST00000573209 TIMM17BO60830 172 aa7.9□□□□□ -1.14
CHRNB1-205ENST00000573209 SNRPD3P62318 126 aaKnown RBP7.9□□□□□ -1.14
CHRNB1-205ENST00000573209 C22orf34Q6ZV56 151 aa7.9□□□□□ -1.14
CHRNB1-205ENST00000573209 SCGB3A1Q96QR1 104 aa7.9□□□□□ -1.14
CHRNB1-205ENST00000573209 PAX4O43316 350 aa7.9□□□□□ -1.15
CHRNB1-205ENST00000573209 IGHV3-48P01763 117 aa7.9□□□□□ -1.15
CHRNB1-205ENST00000573209 LOXP28300 417 aaPredicted RBP7.9□□□□□ -1.15
CHRNB1-205ENST00000573209 XCL1P47992 114 aa7.9□□□□□ -1.15
CHRNB1-205ENST00000573209 VSIG2Q96IQ7 327 aa7.9□□□□□ -1.15
CHRNB1-205ENST00000573209 XCL2Q9UBD3 114 aa7.9□□□□□ -1.15
CHRNB1-205ENST00000573209 U3KQE9 123 aa7.9□□□□□ -1.15
CHRNB1-205ENST00000573209 H7BZZ5 65 aa7.89□□□□□ -1.15
CHRNB1-205ENST00000573209 IGHV1-8P0DP01 117 aa7.89□□□□□ -1.15
CHRNB1-205ENST00000573209 SS18Q15532 418 aa7.89□□□□□ -1.15
CHRNB1-205ENST00000573209 ARFGEF3Q5TH69 2177 aa7.89□□□□□ -1.15
CHRNB1-205ENST00000573209 PRSS2P07478 247 aa7.89□□□□□ -1.15
CHRNB1-205ENST00000573209 CRIP1P50238 77 aa7.89□□□□□ -1.15
CHRNB1-205ENST00000573209 DYNAPQ8N1N2 210 aa7.89□□□□□ -1.15
CHRNB1-205ENST00000573209 CTSZQ9UBR2 303 aa7.89□□□□□ -1.15
CHRNB1-205ENST00000573209 ITPR1Q14643 2758 aa7.89□□□□□ -1.15
CHRNB1-205ENST00000573209 TRAV8-3A0A0A6YYJ7 113 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 BSPH1Q075Z2 132 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 HCP5Q6MZN7 132 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 LYPD2Q6UXB3 125 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 MUSTN1Q8IVN3 82 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 TOMM6Q96B49 74 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 FANCD2OSQ96PS1 177 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 MALRD1Q5VYJ5 2156 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 PLXNB1O43157 2135 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 M0R3E3 92 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 SAA4P35542 130 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 DAZ2Q13117 558 aaKnown RBP7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 C20orf197Q8N268 126 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 NRACQ8N912 160 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 CLEC2BQ92478 149 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 CNFNQ9BYD5 112 aa7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 DAZ3Q9NR90 486 aaKnown RBP7.88□□□□□ -1.15
CHRNB1-205ENST00000573209 PCNX1Q96RV3 2341 aa7.87□□□□□ -1.15
CHRNB1-205ENST00000573209 CCKP06307 115 aa7.87□□□□□ -1.15
CHRNB1-205ENST00000573209 LGALS3P17931 250 aaKnown RBP7.87□□□□□ -1.15
CHRNB1-205ENST00000573209 UBE2E1P51965 193 aa7.87□□□□□ -1.15
CHRNB1-205ENST00000573209 C14orf178Q8N769 122 aaPredicted RBP7.87□□□□□ -1.15
CHRNB1-205ENST00000573209 CCL17Q92583 94 aa7.87□□□□□ -1.15
CHRNB1-205ENST00000573209 Q9UF83 564 aa7.87□□□□□ -1.15
CHRNB1-205ENST00000573209 CIRBPQ14011 172 aaKnown RBP7.86□□□□□ -1.15
CHRNB1-205ENST00000573209 RUSC1-AS1Q66K80 236 aa7.86□□□□□ -1.15
CHRNB1-205ENST00000573209 GHRHP01286 108 aa7.86□□□□□ -1.15
CHRNB1-205ENST00000573209 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
CHRNB1-205ENST00000573209 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
CHRNB1-205ENST00000573209 LRBAP50851 2863 aa7.86□□□□□ -1.15
CHRNB1-205ENST00000573209 SH2D1AO60880 128 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 GAS8-AS1O95177 125 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 IGLV1-47P01700 117 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 LYZP61626 148 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 LYPD1Q8N2G4 141 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 AMELXQ99217 191 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 RNF5Q99942 180 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 MOB4Q9Y3A3 225 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 USP24Q9UPU5 2620 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 ROS1P08922 2347 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 IGHV1-3A0A0C4DH29 117 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 C11orf86A6NJI1 115 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 TACC2O95359 2948 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 UBE2D4Q9Y2X8 147 aa7.85□□□□□ -1.15
CHRNB1-205ENST00000573209 IGHV3-72A0A0B4J1Y9 119 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 I3L2K1 104 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 RBM3P98179 157 aaKnown RBP7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 PLGLAQ15195 96 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 FAM222AQ5U5X8 452 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 MRPL53Q96EL3 112 aaKnown RBP7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 ZFYVE26Q68DK2 2539 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 TRBV19A0A075B6N1 114 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 IGHV3OR16-10A0A075B7F0 116 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 BUB1B-PAK6H3BSN5 160 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 TSPEAR-AS2P59090 65 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 ZNF491Q8N8L2 437 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 DCHS2Q6V1P9 2916 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 ZGRF1Q86YA3 2104 aa7.84□□□□□ -1.15
CHRNB1-205ENST00000573209 PKD1L2Q7Z442 2459 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 A0A087WVE0 104 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 SDHAF1A6NFY7 115 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 H3BRN7 92 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 BCE1O60756 84 aa7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 GATA1P15976 413 aaPredicted RBP7.83□□□□□ -1.16
CHRNB1-205ENST00000573209 KLKP1Q107X0 134 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms