RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CRXO43186 299 aaPredicted RBP7.55□□□□□ -1.2
SMG6-213ENST00000573166 ATP5G1P05496 136 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 MSRB1Q9NZV6 116 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 KIR2DL5BA0A0G2JN68 375 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 KIR2DL5BA0A0G2JPC4 375 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 ZNF80P51504 273 aaPredicted RBP7.55□□□□□ -1.2
SMG6-213ENST00000573166 UBE2V1Q13404 147 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 KIR2DL5AQ8N109 375 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 CITED1Q99966 193 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 MDFICQ9P1T7 246 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 STAB1Q9NY15 2570 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 IGKV3D-20A0A0C4DH25 116 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 SYS1-DBNDD2H3BUS1 97 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 IGLV1-51P01701 117 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 SIGMAR1Q99720 223 aa7.55□□□□□ -1.2
SMG6-213ENST00000573166 TEX48A0A1B0GUV7 120 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 LINC00173Q6ZV60 143 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 RHOHQ15669 191 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 COPS9Q8WXC6 57 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 COL6A5A8TX70 2615 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 TRBV6-1A0A0K0K1D8 114 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 IGLC3P0DOY3 106 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 KIR3DS1Q14943 382 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 TMEM263Q8WUH6 116 aaKnown RBP7.54□□□□□ -1.2
SMG6-213ENST00000573166 TEX43Q6ZNM6 134 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 ODF3Q96PU9 254 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 ZNF747Q9BV97 191 aa7.54□□□□□ -1.2
SMG6-213ENST00000573166 MRPS16Q9Y3D3 137 aaKnown RBP7.54□□□□□ -1.2
SMG6-213ENST00000573166 LINC01549A6NIU2 74 aa7.53□□□□□ -1.2
SMG6-213ENST00000573166 NEGR1Q7Z3B1 354 aa7.53□□□□□ -1.2
SMG6-213ENST00000573166 ITPR1Q14643 2758 aa7.53□□□□□ -1.2
SMG6-213ENST00000573166 MALP21145 153 aa7.53□□□□□ -1.2
SMG6-213ENST00000573166 ODF3L2Q3SX64 289 aa7.53□□□□□ -1.2
SMG6-213ENST00000573166 TRBV25-1A0A075B6N4 114 aa7.53□□□□□ -1.2
SMG6-213ENST00000573166 IGKCP01834 107 aa7.53□□□□□ -1.2
SMG6-213ENST00000573166 FAM110AQ9BQ89 295 aa7.53□□□□□ -1.2
SMG6-213ENST00000573166 H3BRM9 83 aa7.52□□□□□ -1.21
SMG6-213ENST00000573166 LINC00310P59036 64 aa7.52□□□□□ -1.21
SMG6-213ENST00000573166 ZFAND2AQ8N6M9 145 aa7.52□□□□□ -1.21
SMG6-213ENST00000573166 ZNF479Q96JC4 524 aa7.52□□□□□ -1.21
SMG6-213ENST00000573166 ANAPC13Q9BS18 74 aa7.52□□□□□ -1.21
SMG6-213ENST00000573166 I3L3M4 83 aa7.52□□□□□ -1.21
SMG6-213ENST00000573166 MEIG1Q5JSS6 88 aa7.52□□□□□ -1.21
SMG6-213ENST00000573166 LINC00322Q6ZN03 302 aaPredicted RBP7.52□□□□□ -1.21
SMG6-213ENST00000573166 SAMD5Q5TGI4 173 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 GTSF1Q8WW33 167 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 GTSF1LQ9H1H1 148 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 ZFHX4Q86UP3 3567 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 TEX15Q9BXT5 2789 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 TRAV13-1A0A0B4J241 112 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 NPYP01303 97 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 C19orf71A6NCJ1 209 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 SCGB1A1P11684 91 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 GYPEP15421 78 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 KRTAP1-1Q07627 177 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 MLST8Q9BVC4 326 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 COX11Q9Y6N1 276 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 IGHV4-30-4P0DP06 118 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 CKS1BP61024 79 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 SPATA25Q9BR10 227 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
SMG6-213ENST00000573166 IGLV2-8P01709 118 aa7.5□□□□□ -1.21
SMG6-213ENST00000573166 PSCAO43653 123 aa7.5□□□□□ -1.21
SMG6-213ENST00000573166 GAGE6Q13070 117 aa7.5□□□□□ -1.21
SMG6-213ENST00000573166 FAM222AQ5U5X8 452 aa7.5□□□□□ -1.21
SMG6-213ENST00000573166 SMIM2Q9BVW6 85 aa7.5□□□□□ -1.21
SMG6-213ENST00000573166 GATA1P15976 413 aaPredicted RBP7.5□□□□□ -1.21
SMG6-213ENST00000573166 CFAP161Q6P656 301 aa7.5□□□□□ -1.21
SMG6-213ENST00000573166 SFTA2Q6UW10 78 aa7.5□□□□□ -1.21
SMG6-213ENST00000573166 Q6ZTI0 123 aa7.5□□□□□ -1.21
SMG6-213ENST00000573166 JPT2Q9H910 190 aa7.5□□□□□ -1.21
SMG6-213ENST00000573166 AGRNO00468 2067 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 SMIM9A6NGZ8 99 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 MRPS12O15235 138 aaKnown RBP7.49□□□□□ -1.21
SMG6-213ENST00000573166 MRPL23Q16540 153 aaKnown RBP7.49□□□□□ -1.21
SMG6-213ENST00000573166 C2orf66Q6UXQ4 117 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 TP53TG1Q9Y2A0 90 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 DNAL4O96015 105 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 C11orf45Q8TAV5 145 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 SIGLEC8Q9NYZ4 499 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 ZNF815PA8K554 130 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 CCL25O15444 150 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 Q8N8P6 123 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 HHLA3Q9XRX5 114 aa7.49□□□□□ -1.21
SMG6-213ENST00000573166 CHTOPQ9Y3Y2 248 aaKnown RBP7.48□□□□□ -1.21
SMG6-213ENST00000573166 MED14OSP0DP75 135 aa7.48□□□□□ -1.21
SMG6-213ENST00000573166 ZC2HC1BQ5TFG8 222 aa7.48□□□□□ -1.21
SMG6-213ENST00000573166 RNASE8Q8TDE3 154 aaKnown RBP7.48□□□□□ -1.21
SMG6-213ENST00000573166 CTRLP40313 264 aa7.48□□□□□ -1.21
SMG6-213ENST00000573166 SUMO4Q6EEV6 95 aa7.48□□□□□ -1.21
SMG6-213ENST00000573166 KIR2DL5BQ8NHK3 375 aa7.48□□□□□ -1.21
SMG6-213ENST00000573166 RPL39LQ96EH5 51 aaKnown RBP7.47□□□□□ -1.21
SMG6-213ENST00000573166 C20orf78Q9BR46 151 aa7.47□□□□□ -1.21
SMG6-213ENST00000573166 IGLV2-11P01706 119 aa7.47□□□□□ -1.21
SMG6-213ENST00000573166 ATP6V0E2Q8NHE4 81 aa7.47□□□□□ -1.21
SMG6-213ENST00000573166 ICOSQ9Y6W8 199 aa7.47□□□□□ -1.21
SMG6-213ENST00000573166 TACC2O95359 2948 aa7.47□□□□□ -1.21
SMG6-213ENST00000573166 K7EQD1 137 aa7.47□□□□□ -1.21
SMG6-213ENST00000573166 MIFP14174 115 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms