RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 GAGE4Q13068 117 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 GAGE5Q13069 117 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 LELP1Q5T871 98 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 FAM74A4Q5TZK3 123 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 SH2D6Q7Z4S9 175 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 SYT8Q8NBV8 401 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 NEXN-AS1Q8NBZ9 246 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 OCC1Q8TAD7 63 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 PRADC1Q9BSG0 188 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 RNASE7Q9H1E1 156 aaKnown RBP5.82□□□□□ -1.48
SMG6-210ENST00000572205 GTSF1LQ9H1H1 148 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 MED9Q9NWA0 146 aa5.82□□□□□ -1.48
SMG6-210ENST00000572205 TRBV10-1A0A0K0K1A3 114 aa5.81□□□□□ -1.48
SMG6-210ENST00000572205 LINC00310P59036 64 aa5.81□□□□□ -1.48
SMG6-210ENST00000572205 TEX261Q6UWH6 196 aa5.81□□□□□ -1.48
SMG6-210ENST00000572205 OR2D3Q8NGH3 330 aa5.81□□□□□ -1.48
SMG6-210ENST00000572205 ATP6V0E2Q8NHE4 81 aa5.81□□□□□ -1.48
SMG6-210ENST00000572205 DNAJC30Q96LL9 226 aa5.81□□□□□ -1.48
SMG6-210ENST00000572205 LY96Q9Y6Y9 160 aa5.81□□□□□ -1.48
SMG6-210ENST00000572205 IGHV3-38A0A0C4DH36 116 aa5.8□□□□□ -1.48
SMG6-210ENST00000572205 LRCOL1A6NCL2 159 aa5.8□□□□□ -1.48
SMG6-210ENST00000572205 IBA57-AS1B1ANH7 110 aa5.8□□□□□ -1.48
SMG6-210ENST00000572205 K7EP13 123 aa5.8□□□□□ -1.48
SMG6-210ENST00000572205 SOHLH1Q5JUK2 328 aa5.8□□□□□ -1.48
SMG6-210ENST00000572205 NTM-AS1Q6ZSK4 140 aa5.8□□□□□ -1.48
SMG6-210ENST00000572205 FAM231DQ6ZW35 169 aa5.8□□□□□ -1.48
SMG6-210ENST00000572205 LINC01551Q86U37 167 aa5.8□□□□□ -1.48
SMG6-210ENST00000572205 FER1L6-AS1Q8NA97 138 aa5.8□□□□□ -1.48
SMG6-210ENST00000572205 M0QY20 66 aa5.79□□□□□ -1.48
SMG6-210ENST00000572205 P01737 135 aa5.79□□□□□ -1.48
SMG6-210ENST00000572205 RAB4BP61018 213 aa5.79□□□□□ -1.48
SMG6-210ENST00000572205 SUMO2P61956 95 aaKnown RBP5.79□□□□□ -1.48
SMG6-210ENST00000572205 WFDC2Q14508 124 aa5.79□□□□□ -1.48
SMG6-210ENST00000572205 LYZL1Q6UWQ5 148 aa5.79□□□□□ -1.48
SMG6-210ENST00000572205 AP1S3Q96PC3 154 aa5.79□□□□□ -1.48
SMG6-210ENST00000572205 RPP21Q9H633 154 aaKnown RBP5.79□□□□□ -1.48
SMG6-210ENST00000572205 TRBV7-3A0A075B6L6 115 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 A0A087WTM6 91 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 EVI2AP22794 236 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 FUSP35637 526 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMG6-210ENST00000572205 RPS20P60866 119 aaKnown RBP5.78□□□□□ -1.48
SMG6-210ENST00000572205 LAGE3Q14657 143 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 SUMO4Q6EEV6 95 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 SPATA12Q7Z6I5 190 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 NIT1Q86X76 327 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 MAPKAPK5-AS1Q8N8E1 139 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
SMG6-210ENST00000572205 FOXA3P55318 350 aaPredicted RBP5.77□□□□□ -1.49
SMG6-210ENST00000572205 ZNF56Q15929 161 aa5.77□□□□□ -1.49
SMG6-210ENST00000572205 OR10J3Q5JRS4 329 aa5.77□□□□□ -1.49
SMG6-210ENST00000572205 SPANXN1Q5VSR9 72 aa5.77□□□□□ -1.49
SMG6-210ENST00000572205 WDR73Q6P4I2 378 aa5.77□□□□□ -1.49
SMG6-210ENST00000572205 DAZ4Q86SG3 579 aaKnown RBP5.77□□□□□ -1.49
SMG6-210ENST00000572205 SMIM7Q9BQ49 75 aa5.77□□□□□ -1.49
SMG6-210ENST00000572205 DAZ3Q9NR90 486 aaKnown RBP5.77□□□□□ -1.49
SMG6-210ENST00000572205 V9GYV3 84 aa5.77□□□□□ -1.49
SMG6-210ENST00000572205 F2Z2F3 143 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 PRYO14603 147 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 GAS8-AS1O95177 125 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 IGHV3-30P01768 117 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 IGHV3-33P01772 117 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 IGHV3-30-3P0DP02 117 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 IGHV3-30-5P0DP03 117 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 NTF3P20783 257 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 CACNG7P62955 275 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 ATRAIDQ6UW56 229 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 C10orf126Q8N4M7 172 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 ISOC2Q96AB3 205 aa5.76□□□□□ -1.49
SMG6-210ENST00000572205 TRBV6-8A0A0A6YYG3 113 aa5.75□□□□□ -1.49
SMG6-210ENST00000572205 TRAV8-6A0A0B4J262 113 aa5.75□□□□□ -1.49
SMG6-210ENST00000572205 CDK2AP2O75956 126 aa5.75□□□□□ -1.49
SMG6-210ENST00000572205 SSTP61278 116 aa5.75□□□□□ -1.49
SMG6-210ENST00000572205 RPL23P62829 140 aaKnown RBP5.75□□□□□ -1.49
SMG6-210ENST00000572205 RPL36AP83881 106 aaKnown RBP5.75□□□□□ -1.49
SMG6-210ENST00000572205 IFITM2Q01629 132 aa5.75□□□□□ -1.49
SMG6-210ENST00000572205 MPV17L2Q567V2 206 aa5.75□□□□□ -1.49
SMG6-210ENST00000572205 KRTAP26-1Q6PEX3 210 aa5.75□□□□□ -1.49
SMG6-210ENST00000572205 RPL36ALQ969Q0 106 aaKnown RBP5.75□□□□□ -1.49
SMG6-210ENST00000572205 TPPP3Q9BW30 176 aa5.75□□□□□ -1.49
SMG6-210ENST00000572205 BIN3Q9NQY0 253 aa5.75□□□□□ -1.49
SMG6-210ENST00000572205 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
SMG6-210ENST00000572205 A0A087WWC5 75 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 TRAV26-2A0A0B4J265 109 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 ZNF727A8MUV8 499 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 C16orf90A8MZG2 172 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 IQCJQ1A5X6 159 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 NFE4Q86UQ8 179 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 GATD1Q8NB37 220 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 DAZAP1Q96EP5 407 aaKnown RBP5.74□□□□□ -1.49
SMG6-210ENST00000572205 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 EIF5A2Q9GZV4 153 aaKnown RBP5.74□□□□□ -1.49
SMG6-210ENST00000572205 DPH3P1Q9H4G8 78 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 OSTCQ9NRP0 149 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
SMG6-210ENST00000572205 XKRY2A2RUG3 117 aa5.73□□□□□ -1.49
SMG6-210ENST00000572205 GAGE12HA6NDE8 117 aa5.73□□□□□ -1.49
SMG6-210ENST00000572205 GATCO43716 136 aaKnown RBP5.73□□□□□ -1.49
SMG6-210ENST00000572205 MGPP08493 103 aa5.73□□□□□ -1.49
SMG6-210ENST00000572205 CEBPGP53567 150 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms