RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 CXorf1O96002 111 aa7.07□□□□□ -1.28
CHMP6-202ENST00000571457 RPS10P46783 165 aaKnown RBP7.07□□□□□ -1.28
CHMP6-202ENST00000571457 CFAP161Q6P656 301 aa7.07□□□□□ -1.28
CHMP6-202ENST00000571457 NTM-AS1Q6ZSK4 140 aa7.07□□□□□ -1.28
CHMP6-202ENST00000571457 Q86TA4 180 aa7.07□□□□□ -1.28
CHMP6-202ENST00000571457 LYPD6BQ8NI32 183 aa7.07□□□□□ -1.28
CHMP6-202ENST00000571457 ZFP30Q9Y2G7 519 aa7.07□□□□□ -1.28
CHMP6-202ENST00000571457 TRBV6-1A0A0K0K1D8 114 aa7.06□□□□□ -1.28
CHMP6-202ENST00000571457 MPC2O95563 127 aa7.06□□□□□ -1.28
CHMP6-202ENST00000571457 MBP02144 154 aa7.06□□□□□ -1.28
CHMP6-202ENST00000571457 CRIP1P50238 77 aa7.06□□□□□ -1.28
CHMP6-202ENST00000571457 IQCJQ1A5X6 159 aa7.06□□□□□ -1.28
CHMP6-202ENST00000571457 LINC01559Q495D7 138 aa7.06□□□□□ -1.28
CHMP6-202ENST00000571457 MZT2BQ6NZ67 158 aa7.06□□□□□ -1.28
CHMP6-202ENST00000571457 WFDC1Q9HC57 220 aa7.06□□□□□ -1.28
CHMP6-202ENST00000571457 LINC00474Q9P2X8 69 aa7.06□□□□□ -1.28
CHMP6-202ENST00000571457 TMSB15BA0A087X1C1 80 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 IGHV1-24A0A0C4DH33 117 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 FAM231BA6NCW3 169 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 A6NHS1 94 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 F5H697 171 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 PEX7O00628 323 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 SRSF9Q13242 221 aaKnown RBP eCLIP7.05□□□□□ -1.28
CHMP6-202ENST00000571457 Q6ZRP5 223 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 COX8CQ7Z4L0 72 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 PRSS3P2Q8NHM4 247 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 HIST1H2BAQ96A08 127 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 PKIGQ9Y2B9 76 aa7.05□□□□□ -1.28
CHMP6-202ENST00000571457 KRTAP9-6A0A140TA67 174 aa7.04□□□□□ -1.28
CHMP6-202ENST00000571457 A0A1B0GUV1 79 aa7.04□□□□□ -1.28
CHMP6-202ENST00000571457 RAB5CP51148 216 aa7.04□□□□□ -1.28
CHMP6-202ENST00000571457 ZNF471Q9BX82 626 aaPredicted RBP7.04□□□□□ -1.28
CHMP6-202ENST00000571457 NKX6-2Q9C056 277 aaPredicted RBP7.04□□□□□ -1.28
CHMP6-202ENST00000571457 ACTR3CQ9C0K3 210 aaPredicted RBP7.04□□□□□ -1.28
CHMP6-202ENST00000571457 H7C1H1 209 aa7.03□□□□□ -1.28
CHMP6-202ENST00000571457 H2BFSP57053 126 aa7.03□□□□□ -1.28
CHMP6-202ENST00000571457 SERF2P84101 59 aa7.03□□□□□ -1.28
CHMP6-202ENST00000571457 ZNF674Q2M3X9 581 aa7.03□□□□□ -1.28
CHMP6-202ENST00000571457 C20orf203Q8NBC4 194 aa7.03□□□□□ -1.28
CHMP6-202ENST00000571457 PSMG3Q9BT73 122 aaPredicted RBP7.03□□□□□ -1.28
CHMP6-202ENST00000571457 CCDC32Q9BV29 185 aa7.03□□□□□ -1.28
CHMP6-202ENST00000571457 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
CHMP6-202ENST00000571457 MUC21A0A0G2JKD1 596 aa7.02□□□□□ -1.29
CHMP6-202ENST00000571457 SMIM17P0DL12 118 aa7.02□□□□□ -1.29
CHMP6-202ENST00000571457 SULT1A2P50226 295 aa7.02□□□□□ -1.29
CHMP6-202ENST00000571457 UBE2G1P62253 170 aa7.02□□□□□ -1.29
CHMP6-202ENST00000571457 C15orf56Q8N910 161 aa7.02□□□□□ -1.29
CHMP6-202ENST00000571457 OR10AG1Q8NH19 301 aa7.02□□□□□ -1.29
CHMP6-202ENST00000571457 FMC1Q96HJ9 113 aa7.02□□□□□ -1.29
CHMP6-202ENST00000571457 AQP10Q96PS8 301 aa7.02□□□□□ -1.29
CHMP6-202ENST00000571457 ATP6V0CP27449 155 aa7.01□□□□□ -1.29
CHMP6-202ENST00000571457 SPANXN1Q5VSR9 72 aa7.01□□□□□ -1.29
CHMP6-202ENST00000571457 ZNF664Q8N3J9 261 aa7.01□□□□□ -1.29
CHMP6-202ENST00000571457 TMEM243Q9BU79 118 aa7.01□□□□□ -1.29
CHMP6-202ENST00000571457 TNFSF18Q9UNG2 199 aa7.01□□□□□ -1.29
CHMP6-202ENST00000571457 IGLV4-60A0A075B6I1 120 aa7□□□□□ -1.29
CHMP6-202ENST00000571457 A0A096LNI7 61 aa7□□□□□ -1.29
CHMP6-202ENST00000571457 GAGE12HA6NDE8 117 aa7□□□□□ -1.29
CHMP6-202ENST00000571457 CXCL1P09341 107 aa7□□□□□ -1.29
CHMP6-202ENST00000571457 UBE2G2P60604 165 aa7□□□□□ -1.29
CHMP6-202ENST00000571457 HIGD2BQ4VC39 106 aa7□□□□□ -1.29
CHMP6-202ENST00000571457 ENKURQ8TC29 256 aa7□□□□□ -1.29
CHMP6-202ENST00000571457 PSORS1C2Q9UIG4 136 aa7□□□□□ -1.29
CHMP6-202ENST00000571457 GVQW2A0A096LPI5 108 aaPredicted RBP6.99□□□□□ -1.29
CHMP6-202ENST00000571457 TRAV26-2A0A0B4J265 109 aa6.99□□□□□ -1.29
CHMP6-202ENST00000571457 UBE2L6O14933 153 aa6.99□□□□□ -1.29
CHMP6-202ENST00000571457 SSNA1O43805 119 aa6.99□□□□□ -1.29
CHMP6-202ENST00000571457 AP1S3Q96PC3 154 aa6.99□□□□□ -1.29
CHMP6-202ENST00000571457 GFRA4Q9GZZ7 299 aa6.99□□□□□ -1.29
CHMP6-202ENST00000571457 FAM74A7A6NL05 159 aa6.98□□□□□ -1.29
CHMP6-202ENST00000571457 SNAI2O43623 268 aa6.98□□□□□ -1.29
CHMP6-202ENST00000571457 LTAP01374 205 aa6.98□□□□□ -1.29
CHMP6-202ENST00000571457 OR5AL1P0C617 328 aa6.98□□□□□ -1.29
CHMP6-202ENST00000571457 TCEAL7Q9BRU2 100 aa6.98□□□□□ -1.29
CHMP6-202ENST00000571457 SSBP4Q9BWG4 385 aaPredicted RBP6.98□□□□□ -1.29
CHMP6-202ENST00000571457 INMT-MINDY4F8WBC2 141 aa6.97□□□□□ -1.29
CHMP6-202ENST00000571457 CACNG7P62955 275 aa6.97□□□□□ -1.29
CHMP6-202ENST00000571457 MUC21A0A140T8X8 626 aa6.96□□□□□ -1.3
CHMP6-202ENST00000571457 CTXND1A0A1B0GTU2 59 aa6.96□□□□□ -1.3
CHMP6-202ENST00000571457 M0QY20 66 aa6.96□□□□□ -1.3
CHMP6-202ENST00000571457 PGLYRP4Q96LB8 373 aa6.96□□□□□ -1.3
CHMP6-202ENST00000571457 IGKV3OR2-268A0A0C4DH90 116 aa6.95□□□□□ -1.3
CHMP6-202ENST00000571457 AMTP48728 403 aa6.95□□□□□ -1.3
CHMP6-202ENST00000571457 SSTP61278 116 aa6.95□□□□□ -1.3
CHMP6-202ENST00000571457 CHCHD10Q8WYQ3 142 aaPredicted RBP6.95□□□□□ -1.3
CHMP6-202ENST00000571457 MGPP08493 103 aa6.94□□□□□ -1.3
CHMP6-202ENST00000571457 AKR1C3P42330 323 aa6.94□□□□□ -1.3
CHMP6-202ENST00000571457 FHITP49789 147 aa6.94□□□□□ -1.3
CHMP6-202ENST00000571457 NKX2-5P52952 324 aaPredicted RBP6.94□□□□□ -1.3
CHMP6-202ENST00000571457 COTL1Q14019 142 aa6.94□□□□□ -1.3
CHMP6-202ENST00000571457 INO80EQ8NBZ0 244 aaPredicted RBP6.94□□□□□ -1.3
CHMP6-202ENST00000571457 STOML3Q8TAV4 291 aa6.94□□□□□ -1.3
CHMP6-202ENST00000571457 MED28Q9H204 178 aa6.94□□□□□ -1.3
CHMP6-202ENST00000571457 MT-ND6P03923 174 aa6.93□□□□□ -1.3
CHMP6-202ENST00000571457 S100A9P06702 114 aaKnown RBP6.93□□□□□ -1.3
CHMP6-202ENST00000571457 DEFA3P59666 94 aa6.93□□□□□ -1.3
CHMP6-202ENST00000571457 ZNF726P1Q15940 193 aa6.93□□□□□ -1.3
CHMP6-202ENST00000571457 PRR4Q16378 134 aa6.93□□□□□ -1.3
CHMP6-202ENST00000571457 CST9LP1Q5W188 147 aa6.93□□□□□ -1.3
CHMP6-202ENST00000571457 SUMO4Q6EEV6 95 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms