RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 TRBV7-3A0A075B6L6 115 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 TRBV10-1A0A0K0K1A3 114 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 SMIM27A0A1W2PRY6 76 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 DNAH10OSP0CZ25 163 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 TNP2Q05952 138 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 LELP1Q5T871 98 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 C1orf134Q5TEV5 83 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 Q6ZRN7 208 aaPredicted RBP4.72□□□□□ -1.65
SMG6-209ENST00000571442 COMMD7Q86VX2 200 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 GATD1Q8NB37 220 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 RPL39LQ96EH5 51 aaKnown RBP4.72□□□□□ -1.65
SMG6-209ENST00000571442 RNF185Q96GF1 192 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 DNAJC30Q96LL9 226 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 DPH3P1Q9H4G8 78 aa4.72□□□□□ -1.65
SMG6-209ENST00000571442 TMEM218A2RU14 115 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 LINC00862A6NCI5 91 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 PRSS29PA6NIE9 313 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 IGHV3-30P01768 117 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 IGHV3-33P01772 117 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 TRGC1P0CF51 173 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 SMIM17P0DL12 118 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 IGHV3-30-3P0DP02 117 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 IGHV3-30-5P0DP03 117 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 RPL36AP83881 106 aaKnown RBP4.71□□□□□ -1.66
SMG6-209ENST00000571442 OR10J3Q5JRS4 329 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 SH2D6Q7Z4S9 175 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 C6orf223Q8N319 242 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 C15orf54Q8N8G6 183 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 RPL36ALQ969Q0 106 aaKnown RBP4.71□□□□□ -1.66
SMG6-209ENST00000571442 GFRA4Q9GZZ7 299 aa4.71□□□□□ -1.66
SMG6-209ENST00000571442 A0A1B0GUT8 65 aa4.7□□□□□ -1.66
SMG6-209ENST00000571442 FAM231BA6NCW3 169 aa4.7□□□□□ -1.66
SMG6-209ENST00000571442 SMKR1H3BMG3 65 aa4.7□□□□□ -1.66
SMG6-209ENST00000571442 RPS10P46783 165 aaKnown RBP4.7□□□□□ -1.66
SMG6-209ENST00000571442 LINC01556Q5JQF7 62 aa4.7□□□□□ -1.66
SMG6-209ENST00000571442 RASL11AQ6T310 242 aa4.7□□□□□ -1.66
SMG6-209ENST00000571442 DAZ4Q86SG3 579 aaKnown RBP4.7□□□□□ -1.66
SMG6-209ENST00000571442 AMN1Q8IY45 258 aa4.7□□□□□ -1.66
SMG6-209ENST00000571442 DAZ3Q9NR90 486 aaKnown RBP4.7□□□□□ -1.66
SMG6-209ENST00000571442 NAT8BQ9UHF3 227 aa4.7□□□□□ -1.66
SMG6-209ENST00000571442 KIAA1109Q2LD37 5005 aa4.7□□□□□ -1.66
SMG6-209ENST00000571442 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
SMG6-209ENST00000571442 TRBV6-8A0A0A6YYG3 113 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 TRAV8-6A0A0B4J262 113 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 A0A1B0GXF2 115 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 NCR2O95944 276 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 RAB4AP20338 218 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 FUSP35637 526 aaKnown RBP eCLIP4.69□□□□□ -1.66
SMG6-209ENST00000571442 TTC32Q5I0X7 151 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 MRPL54Q6P161 138 aaKnown RBP4.69□□□□□ -1.66
SMG6-209ENST00000571442 UQCC3Q6UW78 93 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 LINC00336Q6ZUF6 198 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 NIT1Q86X76 327 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 TMEM191AQ9H0A3 160 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 RYR1P21817 5038 aa4.69□□□□□ -1.66
SMG6-209ENST00000571442 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
SMG6-209ENST00000571442 DNAH8Q96JB1 4490 aa4.68□□□□□ -1.66
SMG6-209ENST00000571442 IBA57-AS1B1ANH7 110 aa4.68□□□□□ -1.66
SMG6-209ENST00000571442 F8W036 122 aa4.68□□□□□ -1.66
SMG6-209ENST00000571442 PNRC1Q12796 327 aaPredicted RBP4.68□□□□□ -1.66
SMG6-209ENST00000571442 RIGQ13278 110 aa4.68□□□□□ -1.66
SMG6-209ENST00000571442 MPV17L2Q567V2 206 aa4.68□□□□□ -1.66
SMG6-209ENST00000571442 C10orf91Q5T1B1 145 aa4.68□□□□□ -1.66
SMG6-209ENST00000571442 NIT2Q9NQR4 276 aa4.68□□□□□ -1.66
SMG6-209ENST00000571442 H7C1H1 209 aa4.67□□□□□ -1.66
SMG6-209ENST00000571442 CAMPP49913 170 aa4.67□□□□□ -1.66
SMG6-209ENST00000571442 GAGE6Q13070 117 aa4.67□□□□□ -1.66
SMG6-209ENST00000571442 MRPL51Q4U2R6 128 aaKnown RBP4.67□□□□□ -1.66
SMG6-209ENST00000571442 FAM104BQ5XKR9 115 aa4.67□□□□□ -1.66
SMG6-209ENST00000571442 NRACQ8N912 160 aa4.67□□□□□ -1.66
SMG6-209ENST00000571442 Q8N976 141 aa4.67□□□□□ -1.66
SMG6-209ENST00000571442 BORCS7Q96B45 105 aa4.67□□□□□ -1.66
SMG6-209ENST00000571442 SEC11CQ9BY50 192 aa4.67□□□□□ -1.66
SMG6-209ENST00000571442 Q9HAA7 133 aa4.67□□□□□ -1.66
SMG6-209ENST00000571442 A0A087WWC5 75 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 TRBV6-5A0A0K0K1A5 114 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 KRTAP10-2P60368 255 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 WFDC2Q14508 124 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 IQCJQ1A5X6 159 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 ATRAIDQ6UW56 229 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 SMIM15Q7Z3B0 74 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 MAPKAPK5-AS1Q8N8E1 139 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 ANAPC16Q96DE5 110 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 KLK12Q9UKR0 248 aa4.66□□□□□ -1.66
SMG6-209ENST00000571442 CARHSP1Q9Y2V2 147 aaKnown RBP4.66□□□□□ -1.66
SMG6-209ENST00000571442 IGLV4-60A0A075B6I1 120 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 TRAV9-2A0A087WT02 112 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 SDHAF1A6NFY7 115 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 TMEM262E9PQX1 116 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 PPP1R2P9O14990 202 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 TSHBP01222 138 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 MT-ND4LP03901 98 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 POLR2KP53803 58 aaKnown RBP4.65□□□□□ -1.67
SMG6-209ENST00000571442 RBX1P62877 108 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 HBBP68871 147 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 ENHOQ6UWT2 76 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 C10orf126Q8N4M7 172 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 C20orf203Q8NBC4 194 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 MRAP2Q96G30 205 aa4.65□□□□□ -1.67
SMG6-209ENST00000571442 CHCHD5Q9BSY4 110 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms