RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ALKAL2Q6UX46 152 aa12.31□□□□□ -0.44
SCARF1-204ENST00000570902 RPL35P42766 123 aaKnown RBP12.3□□□□□ -0.44
SCARF1-204ENST00000570902 DNLZQ5SXM8 178 aa12.3□□□□□ -0.44
SCARF1-204ENST00000570902 FAM74A4Q5TZK3 123 aa12.3□□□□□ -0.44
SCARF1-204ENST00000570902 C11orf52Q96A22 123 aa12.3□□□□□ -0.44
SCARF1-204ENST00000570902 DERL1Q9BUN8 251 aa12.3□□□□□ -0.44
SCARF1-204ENST00000570902 MLST8Q9BVC4 326 aa12.3□□□□□ -0.44
SCARF1-204ENST00000570902 TRBV10-1A0A0K0K1A3 114 aa12.29□□□□□ -0.44
SCARF1-204ENST00000570902 IFNA1P01562 189 aa12.29□□□□□ -0.44
SCARF1-204ENST00000570902 MEF2BQ02080 365 aaPredicted RBP12.29□□□□□ -0.44
SCARF1-204ENST00000570902 PRR27Q6MZM9 219 aa12.29□□□□□ -0.44
SCARF1-204ENST00000570902 DAZAP1Q96EP5 407 aaKnown RBP12.29□□□□□ -0.44
SCARF1-204ENST00000570902 PHLDA3Q9Y5J5 127 aa12.29□□□□□ -0.44
SCARF1-204ENST00000570902 CRPP02741 224 aa12.28□□□□□ -0.44
SCARF1-204ENST00000570902 BCL2P10415 239 aa12.28□□□□□ -0.44
SCARF1-204ENST00000570902 RPL36AP83881 106 aaKnown RBP12.28□□□□□ -0.44
SCARF1-204ENST00000570902 RPL19P84098 196 aaKnown RBP12.28□□□□□ -0.44
SCARF1-204ENST00000570902 RPL36ALQ969Q0 106 aaKnown RBP12.28□□□□□ -0.44
SCARF1-204ENST00000570902 TMEM262E9PQX1 116 aa12.27□□□□□ -0.45
SCARF1-204ENST00000570902 M0R381 172 aa12.27□□□□□ -0.45
SCARF1-204ENST00000570902 HNRNPA3P51991 378 aaKnown RBP12.27□□□□□ -0.45
SCARF1-204ENST00000570902 SFRP2Q96HF1 295 aa12.27□□□□□ -0.45
SCARF1-204ENST00000570902 VAX2Q9UIW0 290 aa12.27□□□□□ -0.45
SCARF1-204ENST00000570902 TRBV7-3A0A075B6L6 115 aa12.26□□□□□ -0.45
SCARF1-204ENST00000570902 A0A087WWL8 130 aa12.26□□□□□ -0.45
SCARF1-204ENST00000570902 PDE6DO43924 150 aa12.26□□□□□ -0.45
SCARF1-204ENST00000570902 UBE2D3P61077 147 aa12.26□□□□□ -0.45
SCARF1-204ENST00000570902 UBE2D2P62837 147 aa12.26□□□□□ -0.45
SCARF1-204ENST00000570902 CENPWQ5EE01 88 aa12.26□□□□□ -0.45
SCARF1-204ENST00000570902 DGAT2L7PQ6IED9 249 aa12.26□□□□□ -0.45
SCARF1-204ENST00000570902 ENHOQ6UWT2 76 aa12.26□□□□□ -0.45
SCARF1-204ENST00000570902 RAB19A4D1S5 217 aa12.25□□□□□ -0.45
SCARF1-204ENST00000570902 USP17L23D6RBM5 183 aa12.25□□□□□ -0.45
SCARF1-204ENST00000570902 MED9Q9NWA0 146 aa12.25□□□□□ -0.45
SCARF1-204ENST00000570902 TAGLN2P37802 199 aaKnown RBP12.24□□□□□ -0.45
SCARF1-204ENST00000570902 BLOC1S1P78537 153 aa12.24□□□□□ -0.45
SCARF1-204ENST00000570902 ZFP82Q8N141 532 aa12.24□□□□□ -0.45
SCARF1-204ENST00000570902 C15orf54Q8N8G6 183 aa12.24□□□□□ -0.45
SCARF1-204ENST00000570902 TRBV6-8A0A0A6YYG3 113 aa12.23□□□□□ -0.45
SCARF1-204ENST00000570902 HLA-DQA1P01909 254 aa12.23□□□□□ -0.45
SCARF1-204ENST00000570902 PKIAP61925 76 aa12.23□□□□□ -0.45
SCARF1-204ENST00000570902 ANGP03950 147 aaKnown RBP12.22□□□□□ -0.45
SCARF1-204ENST00000570902 MT1HL1P0DM35 61 aa12.22□□□□□ -0.45
SCARF1-204ENST00000570902 GNG4P50150 75 aa12.22□□□□□ -0.45
SCARF1-204ENST00000570902 MIAQ16674 131 aa12.22□□□□□ -0.45
SCARF1-204ENST00000570902 Q6ZRU5 148 aa12.22□□□□□ -0.45
SCARF1-204ENST00000570902 C9orf163Q8N9P6 203 aa12.22□□□□□ -0.45
SCARF1-204ENST00000570902 OR10G8Q8NGN5 311 aa12.22□□□□□ -0.45
SCARF1-204ENST00000570902 MUC21A0A0G2JKD1 596 aa12.21□□□□□ -0.45
SCARF1-204ENST00000570902 MUC21A0A140T8X8 626 aa12.21□□□□□ -0.45
SCARF1-204ENST00000570902 PRSS1P07477 247 aa12.21□□□□□ -0.45
SCARF1-204ENST00000570902 CXCL1P09341 107 aa12.21□□□□□ -0.45
SCARF1-204ENST00000570902 SSTP61278 116 aa12.21□□□□□ -0.45
SCARF1-204ENST00000570902 MPV17L2Q567V2 206 aa12.21□□□□□ -0.45
SCARF1-204ENST00000570902 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.21□□□□□ -0.45
SCARF1-204ENST00000570902 OR10AG1Q8NH19 301 aa12.21□□□□□ -0.45
SCARF1-204ENST00000570902 LYPD6BQ8NI32 183 aa12.21□□□□□ -0.45
SCARF1-204ENST00000570902 TRBV20OR9-2A0A075B6H5 130 aa12.2□□□□□ -0.46
SCARF1-204ENST00000570902 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.2□□□□□ -0.46
SCARF1-204ENST00000570902 SMIM12Q96EX1 92 aa12.19□□□□□ -0.46
SCARF1-204ENST00000570902 SNAI2O43623 268 aa12.18□□□□□ -0.46
SCARF1-204ENST00000570902 GZMBP10144 247 aa12.18□□□□□ -0.46
SCARF1-204ENST00000570902 RAB4BP61018 213 aa12.18□□□□□ -0.46
SCARF1-204ENST00000570902 SPANXN1Q5VSR9 72 aa12.18□□□□□ -0.46
SCARF1-204ENST00000570902 CHCHD5Q9BSY4 110 aa12.18□□□□□ -0.46
SCARF1-204ENST00000570902 SSBP4Q9BWG4 385 aaPredicted RBP12.18□□□□□ -0.46
SCARF1-204ENST00000570902 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
SCARF1-204ENST00000570902 OR2D3Q8NGH3 330 aa12.17□□□□□ -0.46
SCARF1-204ENST00000570902 TPPP3Q9BW30 176 aa12.17□□□□□ -0.46
SCARF1-204ENST00000570902 C19orf71A6NCJ1 209 aa12.16□□□□□ -0.46
SCARF1-204ENST00000570902 ZNF56Q15929 161 aa12.16□□□□□ -0.46
SCARF1-204ENST00000570902 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
SCARF1-204ENST00000570902 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
SCARF1-204ENST00000570902 NEXN-AS1Q8NBZ9 246 aa12.16□□□□□ -0.46
SCARF1-204ENST00000570902 CLRN3Q8NCR9 226 aa12.16□□□□□ -0.46
SCARF1-204ENST00000570902 PANO1I0J062 215 aa12.15□□□□□ -0.46
SCARF1-204ENST00000570902 PRR34Q9NV39 138 aa12.15□□□□□ -0.46
SCARF1-204ENST00000570902 TMEM250H0YL14 139 aa12.14□□□□□ -0.47
SCARF1-204ENST00000570902 P01737 135 aa12.14□□□□□ -0.47
SCARF1-204ENST00000570902 RPS20P60866 119 aaKnown RBP12.14□□□□□ -0.47
SCARF1-204ENST00000570902 OCC1Q8TAD7 63 aa12.14□□□□□ -0.47
SCARF1-204ENST00000570902 EIF5A2Q9GZV4 153 aaKnown RBP12.14□□□□□ -0.47
SCARF1-204ENST00000570902 BIN3Q9NQY0 253 aa12.14□□□□□ -0.47
SCARF1-204ENST00000570902 CEBPGP53567 150 aa12.13□□□□□ -0.47
SCARF1-204ENST00000570902 CIRBPQ14011 172 aaKnown RBP12.13□□□□□ -0.47
SCARF1-204ENST00000570902 FER1L6-AS1Q8NA97 138 aa12.13□□□□□ -0.47
SCARF1-204ENST00000570902 F5H697 171 aa12.12□□□□□ -0.47
SCARF1-204ENST00000570902 K7EN84 100 aa12.12□□□□□ -0.47
SCARF1-204ENST00000570902 SMIM17P0DL12 118 aa12.12□□□□□ -0.47
SCARF1-204ENST00000570902 CNBPP62633 177 aaKnown RBP12.12□□□□□ -0.47
SCARF1-204ENST00000570902 KRTAP26-1Q6PEX3 210 aa12.12□□□□□ -0.47
SCARF1-204ENST00000570902 LINC00269Q8N2A0 174 aa12.12□□□□□ -0.47
SCARF1-204ENST00000570902 XKRY2A2RUG3 117 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 IGLC6P0CF74 106 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 RBX1P62877 108 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 CLPSL2Q6UWE3 100 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 TEX261Q6UWH6 196 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 NUDT10Q8NFP7 164 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 DPH3Q96FX2 82 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 NUDT11Q96G61 164 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms