RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 EPM2AB3EWF7 344 aa8.25□□□□□ -1.09
CTDNEP1-205ENST00000570828 CXCL1P09341 107 aa8.25□□□□□ -1.09
CTDNEP1-205ENST00000570828 RPL36AP83881 106 aaKnown RBP8.25□□□□□ -1.09
CTDNEP1-205ENST00000570828 RPL19P84098 196 aaKnown RBP8.25□□□□□ -1.09
CTDNEP1-205ENST00000570828 DGAT2L7PQ6IED9 249 aa8.25□□□□□ -1.09
CTDNEP1-205ENST00000570828 PRR27Q6MZM9 219 aa8.25□□□□□ -1.09
CTDNEP1-205ENST00000570828 Q8N814 137 aa8.25□□□□□ -1.09
CTDNEP1-205ENST00000570828 RPL36ALQ969Q0 106 aaKnown RBP8.25□□□□□ -1.09
CTDNEP1-205ENST00000570828 GNG13Q9P2W3 67 aa8.25□□□□□ -1.09
CTDNEP1-205ENST00000570828 XGP55808 180 aa8.24□□□□□ -1.09
CTDNEP1-205ENST00000570828 ZNF56Q15929 161 aa8.24□□□□□ -1.09
CTDNEP1-205ENST00000570828 EIF5AL1Q6IS14 154 aaKnown RBP8.24□□□□□ -1.09
CTDNEP1-205ENST00000570828 DAZ4Q86SG3 579 aaKnown RBP8.24□□□□□ -1.09
CTDNEP1-205ENST00000570828 OR10AG1Q8NH19 301 aa8.24□□□□□ -1.09
CTDNEP1-205ENST00000570828 MLST8Q9BVC4 326 aa8.24□□□□□ -1.09
CTDNEP1-205ENST00000570828 DAZ3Q9NR90 486 aaKnown RBP8.24□□□□□ -1.09
CTDNEP1-205ENST00000570828 GAGE10A6NGK3 116 aa8.23□□□□□ -1.09
CTDNEP1-205ENST00000570828 TEX46H3BTG2 121 aa8.23□□□□□ -1.09
CTDNEP1-205ENST00000570828 RPL35P42766 123 aaKnown RBP8.23□□□□□ -1.09
CTDNEP1-205ENST00000570828 RAB5CP51148 216 aa8.23□□□□□ -1.09
CTDNEP1-205ENST00000570828 MAJINQ3KP22 176 aa8.23□□□□□ -1.09
CTDNEP1-205ENST00000570828 SPANXN1Q5VSR9 72 aa8.23□□□□□ -1.09
CTDNEP1-205ENST00000570828 KCNIP4Q6PIL6 250 aa8.23□□□□□ -1.09
CTDNEP1-205ENST00000570828 RMI2Q96E14 147 aa8.23□□□□□ -1.09
CTDNEP1-205ENST00000570828 TRBV7-3A0A075B6L6 115 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 A0A087WX48 190 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 TRAV1-1A0A0B4J248 108 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 OR5AL1P0C617 328 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 RAB4BP61018 213 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 UBE2D3P61077 147 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 UBE2D2P62837 147 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 NIT1Q86X76 327 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 FRZBQ92765 325 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 C11orf52Q96A22 123 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 TMEM70Q9BUB7 260 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 COX11Q9Y6N1 276 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 FAT1Q14517 4588 aa8.22□□□□□ -1.09
CTDNEP1-205ENST00000570828 MUC21A0A0G2JKD1 596 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 MUC21A0A140T8X8 626 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 SNAI2O43623 268 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 CCL20P78556 96 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 CENPWQ5EE01 88 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 Q5VSD8 79 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 OR10G8Q8NGN5 311 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 AP1S3Q96PC3 154 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 CHCHD7Q9BUK0 85 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 DERL1Q9BUN8 251 aa8.21□□□□□ -1.1
CTDNEP1-205ENST00000570828 LECT2O14960 151 aa8.2□□□□□ -1.1
CTDNEP1-205ENST00000570828 SMIM17P0DL12 118 aa8.2□□□□□ -1.1
CTDNEP1-205ENST00000570828 SSTP61278 116 aa8.2□□□□□ -1.1
CTDNEP1-205ENST00000570828 ELOBQ15370 118 aa8.2□□□□□ -1.1
CTDNEP1-205ENST00000570828 NEXN-AS1Q8NBZ9 246 aa8.2□□□□□ -1.1
CTDNEP1-205ENST00000570828 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
CTDNEP1-205ENST00000570828 IGKV2D-24A0A075B6R9 120 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 F5H697 171 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 IFNA1P01562 189 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 GNG4P50150 75 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 SULT1A2P50226 295 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 HAMPP81172 84 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 MEF2BQ02080 365 aaPredicted RBP8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 WFDC2Q14508 124 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 TCTE3Q8IZS6 198 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 UBE2WQ96B02 151 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 DAZAP1Q96EP5 407 aaKnown RBP8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 TPPP3Q9BW30 176 aa8.19□□□□□ -1.1
CTDNEP1-205ENST00000570828 TRBV6-8A0A0A6YYG3 113 aa8.18□□□□□ -1.1
CTDNEP1-205ENST00000570828 RBFOX3A6NFN3 312 aa8.18□□□□□ -1.1
CTDNEP1-205ENST00000570828 TMEM262E9PQX1 116 aa8.18□□□□□ -1.1
CTDNEP1-205ENST00000570828 PDE6DO43924 150 aa8.18□□□□□ -1.1
CTDNEP1-205ENST00000570828 RPS20P60866 119 aaKnown RBP8.18□□□□□ -1.1
CTDNEP1-205ENST00000570828 OR2D3Q8NGH3 330 aa8.18□□□□□ -1.1
CTDNEP1-205ENST00000570828 BAALCQ8WXS3 180 aa8.18□□□□□ -1.1
CTDNEP1-205ENST00000570828 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
CTDNEP1-205ENST00000570828 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.17□□□□□ -1.1
CTDNEP1-205ENST00000570828 XKRY2A2RUG3 117 aa8.17□□□□□ -1.1
CTDNEP1-205ENST00000570828 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
CTDNEP1-205ENST00000570828 PKIAP61925 76 aa8.17□□□□□ -1.1
CTDNEP1-205ENST00000570828 SLC51BQ86UW2 128 aa8.17□□□□□ -1.1
CTDNEP1-205ENST00000570828 FER1L6-AS1Q8NA97 138 aa8.17□□□□□ -1.1
CTDNEP1-205ENST00000570828 DNAJC30Q96LL9 226 aa8.17□□□□□ -1.1
CTDNEP1-205ENST00000570828 CHCHD5Q9BSY4 110 aa8.17□□□□□ -1.1
CTDNEP1-205ENST00000570828 RAB19A4D1S5 217 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 IGLV2-8P01709 118 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 P01737 135 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 CRPP02741 224 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 C1QBP02746 253 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 MGPP08493 103 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 GZMBP10144 247 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 BCL2P10415 239 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 Q0VG73 95 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 TMEM97Q5BJF2 176 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 Q8N976 141 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 MED9Q9NWA0 146 aa8.16□□□□□ -1.1
CTDNEP1-205ENST00000570828 C19orf71A6NCJ1 209 aa8.15□□□□□ -1.1
CTDNEP1-205ENST00000570828 IGLC6P0CF74 106 aa8.15□□□□□ -1.1
CTDNEP1-205ENST00000570828 CACNG7P62955 275 aa8.15□□□□□ -1.1
CTDNEP1-205ENST00000570828 MPV17L2Q567V2 206 aa8.15□□□□□ -1.1
CTDNEP1-205ENST00000570828 C15orf54Q8N8G6 183 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms