RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CLRN3Q8NCR9 226 aa4.31□□□□□ -1.72
SMG6-205ENST00000570659 OR10G8Q8NGN5 311 aa4.31□□□□□ -1.72
SMG6-205ENST00000570659 SFRP2Q96HF1 295 aa4.31□□□□□ -1.72
SMG6-205ENST00000570659 SDHCQ99643 169 aaPredicted RBP4.31□□□□□ -1.72
SMG6-205ENST00000570659 ATP5SQ99766 215 aa4.31□□□□□ -1.72
SMG6-205ENST00000570659 ZNF471Q9BX82 626 aaPredicted RBP4.31□□□□□ -1.72
SMG6-205ENST00000570659 VCX2Q9H322 139 aa4.31□□□□□ -1.72
SMG6-205ENST00000570659 PSORS1C2Q9UIG4 136 aa4.31□□□□□ -1.72
SMG6-205ENST00000570659 PSG8Q9UQ74 426 aa4.31□□□□□ -1.72
SMG6-205ENST00000570659 TRBV7-3A0A075B6L6 115 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 M0R036 132 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 TAAR5O14804 337 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 ARMS2P0C7Q2 107 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 SEC11BP0C7V7 166 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 RPL35P42766 123 aaKnown RBP4.3□□□□□ -1.72
SMG6-205ENST00000570659 S100A10P60903 97 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 IFITM2Q01629 132 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 PRR27Q6MZM9 219 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 Q6ZRP5 223 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 PRNTQ86SH4 94 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 OR5C1Q8NGR4 320 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 WDR61Q9GZS3 305 aaKnown RBP4.3□□□□□ -1.72
SMG6-205ENST00000570659 BIN3Q9NQY0 253 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 OR5AC2Q9NZP5 309 aa4.3□□□□□ -1.72
SMG6-205ENST00000570659 TMSB15BA0A087X1C1 80 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 PIGBOS1A0A0B4J2F0 54 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 MUC21A0A140T8X8 626 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 FAM231BA6NCW3 169 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 KRBOX1C9JBD0 128 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 M0R381 172 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 TCRAP04437 139 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 S100A11P31949 105 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 RAB2AP61019 212 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 NUDT10Q8NFP7 164 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 IL36BQ9NZH7 164 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 ALG5Q9Y673 324 aa4.29□□□□□ -1.72
SMG6-205ENST00000570659 A0A1B0GV90 55 aa4.28□□□□□ -1.72
SMG6-205ENST00000570659 GAGE12HA6NDE8 117 aa4.28□□□□□ -1.72
SMG6-205ENST00000570659 FAUP35544 74 aaKnown RBP4.28□□□□□ -1.72
SMG6-205ENST00000570659 RPS10P46783 165 aaKnown RBP4.28□□□□□ -1.72
SMG6-205ENST00000570659 CACNG7P62955 275 aa4.28□□□□□ -1.72
SMG6-205ENST00000570659 RPL36AP83881 106 aaKnown RBP4.28□□□□□ -1.72
SMG6-205ENST00000570659 OR2D3Q8NGH3 330 aa4.28□□□□□ -1.72
SMG6-205ENST00000570659 STOML3Q8TAV4 291 aa4.28□□□□□ -1.72
SMG6-205ENST00000570659 RPL36ALQ969Q0 106 aaKnown RBP4.28□□□□□ -1.72
SMG6-205ENST00000570659 WFDC1Q9HC57 220 aa4.28□□□□□ -1.72
SMG6-205ENST00000570659 TRBV10-1A0A0K0K1A3 114 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 H3BMQ9 156 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 SIX6O95475 246 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 TSPAN13O95857 204 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 TMBIM6P55061 237 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 PIK3CD-AS1Q5SR53 167 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 LCE2CQ5TA81 110 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 KCNIP4Q6PIL6 250 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 PHF5AQ7RTV0 110 aaKnown RBP4.27□□□□□ -1.73
SMG6-205ENST00000570659 CMTM2Q8TAZ6 248 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 RETNLBQ9BQ08 111 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 C2orf88Q9BSF0 95 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 ARL2-SNX15V9GYD0 113 aa4.27□□□□□ -1.73
SMG6-205ENST00000570659 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.26□□□□□ -1.73
SMG6-205ENST00000570659 TRAV26-2A0A0B4J265 109 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 TRBV6-1A0A0K0K1D8 114 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 CENPXA8MT69 81 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 B4DEV8 164 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 RHODO00212 210 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 PLA2G10O15496 165 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 SH2D1AO60880 128 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 ARL14EPLP0DKL9 152 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 S100A4P26447 101 aaKnown RBP4.26□□□□□ -1.73
SMG6-205ENST00000570659 UBE2G2P60604 165 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 ATP6V1FQ16864 119 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 KHDC3LQ587J8 217 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 DNLZQ5SXM8 178 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 KRTAP7-1Q8IUC3 87 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 ZNF664Q8N3J9 261 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 OR11H4Q8NGC9 324 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 OR10AG1Q8NH19 301 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 SH3BGRL3Q9H299 93 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 AP5S1Q9NUS5 200 aa4.26□□□□□ -1.73
SMG6-205ENST00000570659 GVQW2A0A096LPI5 108 aaPredicted RBP4.25□□□□□ -1.73
SMG6-205ENST00000570659 IGKV3OR2-268A0A0C4DH90 116 aa4.25□□□□□ -1.73
SMG6-205ENST00000570659 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
SMG6-205ENST00000570659 HBG1P69891 147 aa4.25□□□□□ -1.73
SMG6-205ENST00000570659 HBG2P69892 147 aa4.25□□□□□ -1.73
SMG6-205ENST00000570659 IQCJQ1A5X6 159 aa4.25□□□□□ -1.73
SMG6-205ENST00000570659 C1orf137Q5JT78 98 aa4.25□□□□□ -1.73
SMG6-205ENST00000570659 DERL1Q9BUN8 251 aa4.25□□□□□ -1.73
SMG6-205ENST00000570659 SSBP4Q9BWG4 385 aaPredicted RBP4.25□□□□□ -1.73
SMG6-205ENST00000570659 SMIM3Q9BZL3 60 aa4.25□□□□□ -1.73
SMG6-205ENST00000570659 FAM168BA1KXE4 195 aa4.24□□□□□ -1.73
SMG6-205ENST00000570659 IGLV7-43P04211 117 aa4.24□□□□□ -1.73
SMG6-205ENST00000570659 SUMO1P63165 101 aaKnown RBP4.24□□□□□ -1.73
SMG6-205ENST00000570659 BLOC1S1P78537 153 aa4.24□□□□□ -1.73
SMG6-205ENST00000570659 FOXI1Q12951 378 aa4.24□□□□□ -1.73
SMG6-205ENST00000570659 ZNF56Q15929 161 aa4.24□□□□□ -1.73
SMG6-205ENST00000570659 ZFP69Q49AA0 526 aa4.24□□□□□ -1.73
SMG6-205ENST00000570659 Q86TA4 180 aa4.24□□□□□ -1.73
SMG6-205ENST00000570659 C5orf17Q8NAS9 161 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms