RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ESDP10768 282 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 HTN3P15516 51 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 ETV6P41212 452 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 AKR1C2P52895 323 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 PIGPP57054 158 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 PSG9Q00887 426 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 RRN3P1Q2M238 152 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 GDF5OSQ5U4N7 250 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 TRIQKQ629K1 86 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 SMIM15Q7Z3B0 74 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 SPATA12Q7Z6I5 190 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 LHFPL1Q86WI0 220 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 AMN1Q8IY45 258 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 SREK1IP1Q8N9Q2 155 aaPredicted RBP2□□□□□ -2.09
CNOT1-221ENST00000569924 SPANXA2-OT1Q8N9U9 137 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 OR2D3Q8NGH3 330 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 LHFPL5Q8TAF8 219 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 LINC00052Q96N35 136 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 TP53RKQ96S44 253 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 PKIGQ9Y2B9 76 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 MRPS16Q9Y3D3 137 aaKnown RBP2□□□□□ -2.09
CNOT1-221ENST00000569924 PXMP4Q9Y6I8 212 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 MYCBP2O75592 4640 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 A0A0J9YX75 114 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 SMIM31A0A1B0GVY4 71 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 INMT-MINDY4F8WBC2 141 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 APOMO95445 188 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 CDS2O95674 445 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 CFDP00746 253 aaPredicted RBP1.99□□□□□ -2.09
CNOT1-221ENST00000569924 CRYGDP07320 174 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 FGF6P10767 208 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 ATP5G3P48201 142 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 CCL18P55774 89 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 FXYD7P58549 80 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 DEFB1P60022 68 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 SUPT4H1P63272 117 aaKnown RBP1.99□□□□□ -2.09
CNOT1-221ENST00000569924 IAH1Q2TAA2 248 aaPredicted RBP1.99□□□□□ -2.09
CNOT1-221ENST00000569924 RNASE10Q5GAN6 216 aaKnown RBP1.99□□□□□ -2.09
CNOT1-221ENST00000569924 NMSQ5H8A3 153 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 AMTNQ6UX39 209 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 TMEM144Q7Z5S9 345 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 SNX29P2Q8IUI4 249 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 MIR7-3HGQ8N6C7 128 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 OR4B1Q8NGF8 309 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 OR4C16Q8NGL9 310 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 TERB2Q8NHR7 220 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 RNASE11Q8TAA1 199 aaKnown RBP1.99□□□□□ -2.09
CNOT1-221ENST00000569924 RBPMSQ93062 196 aaKnown RBP1.99□□□□□ -2.09
CNOT1-221ENST00000569924 GPR146Q96CH1 333 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 IGF2BP2-AS1Q96M15 143 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 LINC00477Q96M19 166 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 TMEM222Q9H0R3 208 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 SLC35B3Q9H1N7 401 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 Q9H521 79 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 RPRMQ9NS64 109 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 COPZ2Q9P299 210 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 LINC00588Q9Y4M8 146 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 U3KQ87 197 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 FAT1Q14517 4588 aa1.99□□□□□ -2.09
CNOT1-221ENST00000569924 FLG2Q5D862 2391 aaPredicted RBP1.98□□□□□ -2.09
CNOT1-221ENST00000569924 SRRM2Q9UQ35 2752 aaKnown RBP1.98□□□□□ -2.09
CNOT1-221ENST00000569924 IGKV1D-37A0A075B6S9 117 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 IGKV3D-20A0A0C4DH25 116 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 A0A1B0GV72 72 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 LINC00862A6NCI5 91 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 CRYM-AS1A6NIL9 109 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 CEBPZOSA8MTT3 80 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 SNRPGP15A8MWD9 76 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 H3BNG1 76 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 GABARAPH6UMI1 98 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 PDE6DO43924 150 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 CD3DP04234 171 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 SULT1A3P0DMM9 295 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 SULT1A4P0DMN0 295 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 INAFM2P0DMQ5 153 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 DEFB130BP0DP73 79 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 DEFB130AP0DP74 79 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 S100A7P31151 101 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 CRYBA4P53673 196 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 ZNF90Q03938 601 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 SSBP1Q04837 148 aaKnown RBP1.98□□□□□ -2.09
CNOT1-221ENST00000569924 SURF2Q15527 256 aaPredicted RBP1.98□□□□□ -2.09
CNOT1-221ENST00000569924 NEDD8Q15843 81 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 BAP18Q8IXM2 172 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 OR8I2Q8N0Y5 310 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 TMEM229BQ8NBD8 167 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 OR13C8Q8NGS7 320 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 MCFD2Q8NI22 146 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 FRZBQ92765 325 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 TRGV9Q99603 122 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 UPK3BQ9BT76 320 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 PBDC1Q9BVG4 233 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 NAA60Q9H7X0 242 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 ZNF586Q9NXT0 402 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 COMMD3Q9UBI1 195 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 TMEM56-RWDD3S4R434 201 aa1.98□□□□□ -2.09
CNOT1-221ENST00000569924 PIGBOS1A0A0B4J2F0 54 aa1.97□□□□□ -2.09
CNOT1-221ENST00000569924 FAM236DA0A1B0GTK5 79 aa1.97□□□□□ -2.09
CNOT1-221ENST00000569924 ZNF98A6NK75 572 aa1.97□□□□□ -2.09
CNOT1-221ENST00000569924 A8MWP4 228 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms