RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 LAMTOR2Q9Y2Q5 125 aa16.34■□□□□ 0.21
RAB40C-212ENST00000569575 TNFRSF18Q9Y5U5 241 aa16.34■□□□□ 0.21
RAB40C-212ENST00000569575 A0A096LPF7 62 aa16.33■□□□□ 0.2
RAB40C-212ENST00000569575 TRBV6-5A0A0K0K1A5 114 aa16.33■□□□□ 0.2
RAB40C-212ENST00000569575 PHOX2AO14813 284 aa16.33■□□□□ 0.2
RAB40C-212ENST00000569575 NUDT3O95989 172 aa16.33■□□□□ 0.2
RAB40C-212ENST00000569575 TIRAPP58753 221 aa16.33■□□□□ 0.2
RAB40C-212ENST00000569575 MRPL51Q4U2R6 128 aaKnown RBP16.33■□□□□ 0.2
RAB40C-212ENST00000569575 TGIF2-C20orf24A0A0A6YYL0 155 aa16.32■□□□□ 0.2
RAB40C-212ENST00000569575 LINC00694P0DN24 101 aa16.32■□□□□ 0.2
RAB40C-212ENST00000569575 CKS2P33552 79 aa16.32■□□□□ 0.2
RAB40C-212ENST00000569575 DAZ4Q86SG3 579 aaKnown RBP16.32■□□□□ 0.2
RAB40C-212ENST00000569575 CBLN2Q8IUK8 224 aa16.32■□□□□ 0.2
RAB40C-212ENST00000569575 NEXN-AS1Q8NBZ9 246 aa16.32■□□□□ 0.2
RAB40C-212ENST00000569575 DAZ3Q9NR90 486 aaKnown RBP16.32■□□□□ 0.2
RAB40C-212ENST00000569575 TMEM97Q5BJF2 176 aa16.31■□□□□ 0.2
RAB40C-212ENST00000569575 ORMDL3Q8N138 153 aa16.31■□□□□ 0.2
RAB40C-212ENST00000569575 ZNRF2Q8NHG8 242 aa16.31■□□□□ 0.2
RAB40C-212ENST00000569575 UBE2D3P61077 147 aa16.3■□□□□ 0.2
RAB40C-212ENST00000569575 UBE2D2P62837 147 aa16.3■□□□□ 0.2
RAB40C-212ENST00000569575 ATP6V0E2Q8NHE4 81 aa16.3■□□□□ 0.2
RAB40C-212ENST00000569575 APCSP02743 223 aa16.29■□□□□ 0.2
RAB40C-212ENST00000569575 P0DMU3 169 aa16.29■□□□□ 0.2
RAB40C-212ENST00000569575 FAM231AP0DMU4 169 aa16.29■□□□□ 0.2
RAB40C-212ENST00000569575 FAM231CP0DMU5 169 aa16.29■□□□□ 0.2
RAB40C-212ENST00000569575 OR10J3Q5JRS4 329 aa16.29■□□□□ 0.2
RAB40C-212ENST00000569575 C20orf78Q9BR46 151 aa16.29■□□□□ 0.2
RAB40C-212ENST00000569575 TRAV26-2A0A0B4J265 109 aa16.28■□□□□ 0.2
RAB40C-212ENST00000569575 GAGE12JA6NER3 117 aa16.28■□□□□ 0.2
RAB40C-212ENST00000569575 CCL18P55774 89 aa16.28■□□□□ 0.2
RAB40C-212ENST00000569575 GAGE1Q13065 139 aa16.28■□□□□ 0.2
RAB40C-212ENST00000569575 GAGE4Q13068 117 aa16.28■□□□□ 0.2
RAB40C-212ENST00000569575 GAGE5Q13069 117 aa16.28■□□□□ 0.2
RAB40C-212ENST00000569575 GAGE13Q4V321 117 aa16.28■□□□□ 0.2
RAB40C-212ENST00000569575 LOC100131303A0A0U1RQF7 123 aa16.27■□□□□ 0.2
RAB40C-212ENST00000569575 RPL32P62910 135 aaKnown RBP16.27■□□□□ 0.2
RAB40C-212ENST00000569575 GTSF1LQ9H1H1 148 aa16.27■□□□□ 0.2
RAB40C-212ENST00000569575 ST20Q9HBF5 79 aa16.27■□□□□ 0.2
RAB40C-212ENST00000569575 D6R8Y8 96 aa16.26■□□□□ 0.19
RAB40C-212ENST00000569575 TRAPPC1Q9Y5R8 145 aa16.26■□□□□ 0.19
RAB40C-212ENST00000569575 NRACQ8N912 160 aa16.25■□□□□ 0.19
RAB40C-212ENST00000569575 MRPL18Q9H0U6 180 aaKnown RBP16.25■□□□□ 0.19
RAB40C-212ENST00000569575 PRSS47A8MTI9 375 aa16.24■□□□□ 0.19
RAB40C-212ENST00000569575 TCAPO15273 167 aa16.24■□□□□ 0.19
RAB40C-212ENST00000569575 SUMO2P61956 95 aaKnown RBP16.24■□□□□ 0.19
RAB40C-212ENST00000569575 LYPD5Q6UWN5 251 aa16.24■□□□□ 0.19
RAB40C-212ENST00000569575 PRELID3AQ96N28 172 aa16.24■□□□□ 0.19
RAB40C-212ENST00000569575 Q9UF83 564 aa16.24■□□□□ 0.19
RAB40C-212ENST00000569575 SDHAF1A6NFY7 115 aa16.23■□□□□ 0.19
RAB40C-212ENST00000569575 COLCA2A8K830 154 aa16.23■□□□□ 0.19
RAB40C-212ENST00000569575 TNFRSF6BO95407 300 aa16.23■□□□□ 0.19
RAB40C-212ENST00000569575 RPL39LQ96EH5 51 aaKnown RBP16.23■□□□□ 0.19
RAB40C-212ENST00000569575 TRBV27A0A0K0K1C4 114 aa16.22■□□□□ 0.19
RAB40C-212ENST00000569575 VCYO14598 125 aa16.22■□□□□ 0.19
RAB40C-212ENST00000569575 NCR2O95944 276 aa16.22■□□□□ 0.19
RAB40C-212ENST00000569575 POLR2KP53803 58 aaKnown RBP16.22■□□□□ 0.19
RAB40C-212ENST00000569575 FABP9Q0Z7S8 132 aa16.22■□□□□ 0.19
RAB40C-212ENST00000569575 LGALS9CQ6DKI2 356 aa16.22■□□□□ 0.19
RAB40C-212ENST00000569575 I3L3M4 83 aa16.21■□□□□ 0.19
RAB40C-212ENST00000569575 RPS10P46783 165 aaKnown RBP16.21■□□□□ 0.19
RAB40C-212ENST00000569575 TMEM70Q9BUB7 260 aa16.21■□□□□ 0.19
RAB40C-212ENST00000569575 RAB5AP20339 215 aa16.2■□□□□ 0.18
RAB40C-212ENST00000569575 ESRGQ1W209 222 aa16.2■□□□□ 0.18
RAB40C-212ENST00000569575 LELP1Q5T871 98 aa16.2■□□□□ 0.18
RAB40C-212ENST00000569575 UPK3BQ9BT76 320 aa16.2■□□□□ 0.18
RAB40C-212ENST00000569575 MRPS16Q9Y3D3 137 aaKnown RBP16.2■□□□□ 0.18
RAB40C-212ENST00000569575 DNAH7Q8WXX0 4024 aa16.2■□□□□ 0.18
RAB40C-212ENST00000569575 SMKR1H3BMG3 65 aa16.19■□□□□ 0.18
RAB40C-212ENST00000569575 K7EMI3 77 aa16.18■□□□□ 0.18
RAB40C-212ENST00000569575 SCO1O75880 301 aa16.18■□□□□ 0.18
RAB40C-212ENST00000569575 GAS8-AS1O95177 125 aa16.18■□□□□ 0.18
RAB40C-212ENST00000569575 PMCHP20382 165 aa16.18■□□□□ 0.18
RAB40C-212ENST00000569575 COTL1Q14019 142 aa16.18■□□□□ 0.18
RAB40C-212ENST00000569575 KIR2DL4Q99706 377 aa16.18■□□□□ 0.18
RAB40C-212ENST00000569575 MAP1LC3AQ9H492 121 aa16.18■□□□□ 0.18
RAB40C-212ENST00000569575 TRBV6-8A0A0A6YYG3 113 aa16.17■□□□□ 0.18
RAB40C-212ENST00000569575 TRAV8-6A0A0B4J262 113 aa16.17■□□□□ 0.18
RAB40C-212ENST00000569575 NPYP01303 97 aa16.17■□□□□ 0.18
RAB40C-212ENST00000569575 PKIAP61925 76 aa16.17■□□□□ 0.18
RAB40C-212ENST00000569575 UBE2DNLQ8IWF7 75 aa16.17■□□□□ 0.18
RAB40C-212ENST00000569575 ALKBH7Q9BT30 221 aaPredicted RBP16.17■□□□□ 0.18
RAB40C-212ENST00000569575 K7EP13 123 aa16.15■□□□□ 0.18
RAB40C-212ENST00000569575 SMIM2Q9BVW6 85 aa16.15■□□□□ 0.18
RAB40C-212ENST00000569575 NXT2Q9NPJ8 142 aaKnown RBP16.15■□□□□ 0.18
RAB40C-212ENST00000569575 LINC00588Q9Y4M8 146 aa16.15■□□□□ 0.18
RAB40C-212ENST00000569575 TRBV25-1A0A075B6N4 114 aa16.14■□□□□ 0.17
RAB40C-212ENST00000569575 IQCJQ1A5X6 159 aa16.14■□□□□ 0.17
RAB40C-212ENST00000569575 KIAA1644Q3SXP7 199 aa16.14■□□□□ 0.17
RAB40C-212ENST00000569575 IGHV1-24A0A0C4DH33 117 aa16.13■□□□□ 0.17
RAB40C-212ENST00000569575 H7C423 109 aa16.12■□□□□ 0.17
RAB40C-212ENST00000569575 CSMD3Q7Z407 3707 aa16.11■□□□□ 0.17
RAB40C-212ENST00000569575 IGHV3-38A0A0C4DH36 116 aa16.11■□□□□ 0.17
RAB40C-212ENST00000569575 G0S2P27469 103 aa16.11■□□□□ 0.17
RAB40C-212ENST00000569575 Q8N8P6 123 aa16.11■□□□□ 0.17
RAB40C-212ENST00000569575 LINC00476Q8WZB0 136 aa16.11■□□□□ 0.17
RAB40C-212ENST00000569575 CHCHD7Q9BUK0 85 aa16.11■□□□□ 0.17
RAB40C-212ENST00000569575 TRGC2P03986 189 aa16.1■□□□□ 0.17
RAB40C-212ENST00000569575 FCER1GP30273 86 aa16.1■□□□□ 0.17
RAB40C-212ENST00000569575 TENM2Q9NT68 2774 aa16.09■□□□□ 0.17
RAB40C-212ENST00000569575 AMTP48728 403 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms